Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1242 and Pf6N2E2_1243 are separated by 164 nucleotides Pf6N2E2_1243 and Pf6N2E2_1244 are separated by 152 nucleotides Pf6N2E2_1244 and Pf6N2E2_1245 are separated by 121 nucleotides Pf6N2E2_1245 and Pf6N2E2_1246 are separated by 25 nucleotides
Pf6N2E2_1242 - Uricase (urate oxidase) (EC 1.7.3.3), at 1,456,607 to 1,457,572
_1242
Pf6N2E2_1243 - FIG00953437: hypothetical protein, at 1,457,737 to 1,457,991
_1243
Pf6N2E2_1244 - hypothetical protein, at 1,458,144 to 1,458,374
_1244
Pf6N2E2_1245 - hypothetical protein, at 1,458,496 to 1,458,921
_1245
Pf6N2E2_1246 - FIG00961372: hypothetical protein, at 1,458,947 to 1,459,174
_1246
Position (kb)
1457
1458 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1456.785 kb on + strand, within Pf6N2E2_1242 at 1456.785 kb on + strand, within Pf6N2E2_1242 at 1456.785 kb on + strand, within Pf6N2E2_1242 at 1456.810 kb on - strand, within Pf6N2E2_1242 at 1456.967 kb on - strand, within Pf6N2E2_1242 at 1457.227 kb on + strand, within Pf6N2E2_1242 at 1457.227 kb on + strand, within Pf6N2E2_1242 at 1457.227 kb on + strand, within Pf6N2E2_1242 at 1457.228 kb on - strand, within Pf6N2E2_1242 at 1457.555 kb on + strand at 1457.555 kb on + strand at 1457.628 kb on - strand at 1457.657 kb on + strand at 1457.657 kb on + strand at 1457.657 kb on + strand at 1457.703 kb on + strand at 1457.715 kb on + strand at 1457.715 kb on + strand at 1457.721 kb on + strand at 1457.721 kb on + strand at 1457.722 kb on - strand at 1457.722 kb on - strand at 1457.722 kb on - strand at 1457.722 kb on - strand at 1457.725 kb on + strand at 1457.725 kb on + strand at 1457.725 kb on + strand at 1457.726 kb on - strand at 1457.755 kb on + strand at 1457.755 kb on + strand at 1457.756 kb on - strand at 1457.756 kb on - strand at 1457.756 kb on - strand at 1457.756 kb on - strand at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.767 kb on + strand, within Pf6N2E2_1243 at 1457.768 kb on - strand, within Pf6N2E2_1243 at 1457.799 kb on + strand, within Pf6N2E2_1243 at 1457.799 kb on + strand, within Pf6N2E2_1243 at 1457.820 kb on + strand, within Pf6N2E2_1243 at 1457.820 kb on + strand, within Pf6N2E2_1243 at 1457.821 kb on - strand, within Pf6N2E2_1243 at 1457.821 kb on - strand, within Pf6N2E2_1243 at 1457.926 kb on + strand, within Pf6N2E2_1243 at 1457.926 kb on + strand, within Pf6N2E2_1243 at 1457.932 kb on - strand, within Pf6N2E2_1243 at 1457.934 kb on + strand, within Pf6N2E2_1243 at 1458.069 kb on + strand at 1458.329 kb on - strand, within Pf6N2E2_1244 at 1458.409 kb on - strand at 1458.460 kb on + strand at 1458.515 kb on + strand at 1458.620 kb on - strand, within Pf6N2E2_1245 at 1458.625 kb on + strand, within Pf6N2E2_1245 at 1458.625 kb on + strand, within Pf6N2E2_1245 at 1458.625 kb on + strand, within Pf6N2E2_1245 at 1458.625 kb on + strand, within Pf6N2E2_1245 at 1458.625 kb on + strand, within Pf6N2E2_1245 at 1458.626 kb on - strand, within Pf6N2E2_1245 at 1458.626 kb on - strand, within Pf6N2E2_1245 at 1458.627 kb on + strand, within Pf6N2E2_1245 at 1458.627 kb on + strand, within Pf6N2E2_1245 at 1458.627 kb on + strand, within Pf6N2E2_1245 at 1458.627 kb on + strand, within Pf6N2E2_1245 at 1458.627 kb on + strand, within Pf6N2E2_1245 at 1458.628 kb on - strand, within Pf6N2E2_1245 at 1458.628 kb on - strand, within Pf6N2E2_1245 at 1458.628 kb on - strand, within Pf6N2E2_1245 at 1458.727 kb on + strand, within Pf6N2E2_1245 at 1458.728 kb on - strand, within Pf6N2E2_1245 at 1458.844 kb on + strand, within Pf6N2E2_1245 at 1458.845 kb on - strand, within Pf6N2E2_1245 at 1458.845 kb on - strand, within Pf6N2E2_1245 at 1458.847 kb on + strand, within Pf6N2E2_1245 at 1458.848 kb on - strand, within Pf6N2E2_1245 at 1458.848 kb on - strand, within Pf6N2E2_1245 at 1458.848 kb on - strand, within Pf6N2E2_1245 at 1458.850 kb on + strand, within Pf6N2E2_1245
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,456,785 + Pf6N2E2_1242 0.18 -0.4 1,456,785 + Pf6N2E2_1242 0.18 +0.8 1,456,785 + Pf6N2E2_1242 0.18 +0.5 1,456,810 - Pf6N2E2_1242 0.21 -0.4 1,456,967 - Pf6N2E2_1242 0.37 +0.5 1,457,227 + Pf6N2E2_1242 0.64 -1.7 1,457,227 + Pf6N2E2_1242 0.64 -0.8 1,457,227 + Pf6N2E2_1242 0.64 +0.1 1,457,228 - Pf6N2E2_1242 0.64 -0.5 1,457,555 + -0.4 1,457,555 + +0.0 1,457,628 - +0.6 1,457,657 + -0.8 1,457,657 + -1.0 1,457,657 + -0.3 1,457,703 + -1.0 1,457,715 + -0.4 1,457,715 + +0.1 1,457,721 + +0.3 1,457,721 + -0.8 1,457,722 - +0.1 1,457,722 - -3.0 1,457,722 - +0.8 1,457,722 - -0.5 1,457,725 + +0.3 1,457,725 + -1.9 1,457,725 + -0.2 1,457,726 - +0.7 1,457,755 + -2.5 1,457,755 + -0.3 1,457,756 - -1.6 1,457,756 - -0.6 1,457,756 - -1.5 1,457,756 - -0.0 1,457,767 + Pf6N2E2_1243 0.12 -1.6 1,457,767 + Pf6N2E2_1243 0.12 -1.6 1,457,767 + Pf6N2E2_1243 0.12 -1.6 1,457,767 + Pf6N2E2_1243 0.12 -1.9 1,457,767 + Pf6N2E2_1243 0.12 -1.1 1,457,767 + Pf6N2E2_1243 0.12 -1.5 1,457,768 - Pf6N2E2_1243 0.12 +0.9 1,457,799 + Pf6N2E2_1243 0.24 +0.1 1,457,799 + Pf6N2E2_1243 0.24 -1.8 1,457,820 + Pf6N2E2_1243 0.33 +0.1 1,457,820 + Pf6N2E2_1243 0.33 +0.6 1,457,821 - Pf6N2E2_1243 0.33 -0.5 1,457,821 - Pf6N2E2_1243 0.33 +1.2 1,457,926 + Pf6N2E2_1243 0.74 +0.1 1,457,926 + Pf6N2E2_1243 0.74 -2.2 1,457,932 - Pf6N2E2_1243 0.76 +2.5 1,457,934 + Pf6N2E2_1243 0.77 -1.9 1,458,069 + +0.2 1,458,329 - Pf6N2E2_1244 0.80 -1.4 1,458,409 - -0.4 1,458,460 + -2.1 1,458,515 + -0.1 1,458,620 - Pf6N2E2_1245 0.29 -2.6 1,458,625 + Pf6N2E2_1245 0.30 -0.9 1,458,625 + Pf6N2E2_1245 0.30 -0.6 1,458,625 + Pf6N2E2_1245 0.30 +0.4 1,458,625 + Pf6N2E2_1245 0.30 -0.9 1,458,625 + Pf6N2E2_1245 0.30 +1.2 1,458,626 - Pf6N2E2_1245 0.31 +0.1 1,458,626 - Pf6N2E2_1245 0.31 -0.5 1,458,627 + Pf6N2E2_1245 0.31 +0.5 1,458,627 + Pf6N2E2_1245 0.31 +0.5 1,458,627 + Pf6N2E2_1245 0.31 +1.2 1,458,627 + Pf6N2E2_1245 0.31 -0.7 1,458,627 + Pf6N2E2_1245 0.31 -1.8 1,458,628 - Pf6N2E2_1245 0.31 -0.4 1,458,628 - Pf6N2E2_1245 0.31 +1.2 1,458,628 - Pf6N2E2_1245 0.31 -0.8 1,458,727 + Pf6N2E2_1245 0.54 -1.0 1,458,728 - Pf6N2E2_1245 0.54 -0.3 1,458,844 + Pf6N2E2_1245 0.82 +1.1 1,458,845 - Pf6N2E2_1245 0.82 +0.1 1,458,845 - Pf6N2E2_1245 0.82 +0.2 1,458,847 + Pf6N2E2_1245 0.82 -0.4 1,458,848 - Pf6N2E2_1245 0.83 +0.8 1,458,848 - Pf6N2E2_1245 0.83 +0.0 1,458,848 - Pf6N2E2_1245 0.83 -0.8 1,458,850 + Pf6N2E2_1245 0.83 +0.3
Or see this region's nucleotide sequence