Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27685

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
6,160,453	-				-0.1
6,160,453	-				+1.2
6,160,457	+				-1.0
6,160,457	+				-0.1
6,160,457	+				+0.8
6,160,457	+				-1.0
6,160,457	+				-0.1
6,160,458	-				-0.8
6,160,458	-				-1.5
6,160,458	-				-0.9
6,160,458	-				-0.1
6,160,458	-				+0.3
6,160,482	+				-1.9
6,160,482	+				-0.4
6,160,483	-				-1.5
6,160,483	-				-0.1
6,160,483	-				+0.7
6,160,516	+		PFLU_RS27680	0.12	-0.3
6,160,516	+		PFLU_RS27680	0.12	-1.5
6,160,516	+		PFLU_RS27680	0.12	+0.7
6,160,516	+		PFLU_RS27680	0.12	-0.3
6,160,516	+		PFLU_RS27680	0.12	+0.5
6,160,516	+		PFLU_RS27680	0.12	+1.3
6,160,516	+		PFLU_RS27680	0.12	+0.9
6,160,516	+		PFLU_RS27680	0.12	-0.2
6,160,516	+		PFLU_RS27680	0.12	+1.4
6,160,516	+		PFLU_RS27680	0.12	-0.1
6,160,516	+		PFLU_RS27680	0.12	-1.4
6,160,516	+		PFLU_RS27680	0.12	-2.4
6,160,516	+		PFLU_RS27680	0.12	-0.5
6,160,516	+		PFLU_RS27680	0.12	+0.7
6,160,517	-		PFLU_RS27680	0.12	-0.6
6,160,517	-		PFLU_RS27680	0.12	-0.6
6,160,517	-		PFLU_RS27680	0.12	+0.1
6,160,517	-		PFLU_RS27680	0.12	-1.5
6,160,517	-		PFLU_RS27680	0.12	-0.3
6,160,517	-		PFLU_RS27680	0.12	+1.1
6,160,517	-		PFLU_RS27680	0.12	-2.0
6,160,517	-		PFLU_RS27680	0.12	+1.6
6,160,517	-		PFLU_RS27680	0.12	-0.1
6,160,517	-		PFLU_RS27680	0.12	+0.3
6,160,517	-		PFLU_RS27680	0.12	+0.4
6,160,517	-		PFLU_RS27680	0.12	-1.9
6,160,517	-		PFLU_RS27680	0.12	-0.2
6,160,517	-		PFLU_RS27680	0.12	+1.0
6,160,517	-		PFLU_RS27680	0.12	+1.2
6,160,517	-		PFLU_RS27680	0.12	+0.4
6,160,517	-		PFLU_RS27680	0.12	+0.9
6,160,521	+		PFLU_RS27680	0.13	+0.0
6,160,522	-		PFLU_RS27680	0.13	+0.6
6,160,522	-		PFLU_RS27680	0.13	-1.3
6,160,522	-		PFLU_RS27680	0.13	+2.4
6,160,522	-		PFLU_RS27680	0.13	-0.7
6,160,566	+		PFLU_RS27680	0.21	+0.7
6,160,600	+		PFLU_RS27680	0.28	-0.1
6,160,600	+		PFLU_RS27680	0.28	+1.0
6,160,600	+		PFLU_RS27680	0.28	+0.8
6,160,600	+		PFLU_RS27680	0.28	-0.2
6,160,600	+		PFLU_RS27680	0.28	+0.4
6,160,601	-		PFLU_RS27680	0.28	+1.1
6,160,601	-		PFLU_RS27680	0.28	+0.9
6,160,601	-		PFLU_RS27680	0.28	+0.8
6,160,601	-		PFLU_RS27680	0.28	-0.3
6,160,601	-		PFLU_RS27680	0.28	-1.4
6,160,601	-		PFLU_RS27680	0.28	-0.2
6,160,601	-		PFLU_RS27680	0.28	-0.9
6,160,710	+		PFLU_RS27680	0.50	-2.5
6,160,710	+		PFLU_RS27680	0.50	-0.1
6,160,711	-		PFLU_RS27680	0.50	-1.1
6,160,711	-		PFLU_RS27680	0.50	+0.7
6,160,748	-		PFLU_RS27680	0.57	+0.5
6,160,771	+		PFLU_RS27680	0.61	+0.6
6,160,772	-		PFLU_RS27680	0.62	+0.3
6,160,854	+		PFLU_RS27680	0.78	+1.7
6,160,854	+		PFLU_RS27680	0.78	-0.4
6,160,854	+		PFLU_RS27680	0.78	-1.3
6,160,854	+		PFLU_RS27680	0.78	+0.4
6,160,854	+		PFLU_RS27680	0.78	+1.9
6,160,854	+		PFLU_RS27680	0.78	-1.1
6,160,854	+		PFLU_RS27680	0.78	-0.1
6,160,854	+		PFLU_RS27680	0.78	+0.5
6,160,854	+		PFLU_RS27680	0.78	+0.8
6,160,854	+		PFLU_RS27680	0.78	+1.2
6,160,854	+		PFLU_RS27680	0.78	+1.5
6,160,854	+		PFLU_RS27680	0.78	-0.2
6,160,855	-		PFLU_RS27680	0.78	-1.0
6,160,855	-		PFLU_RS27680	0.78	+0.4
6,160,855	-		PFLU_RS27680	0.78	+1.0
6,160,855	-		PFLU_RS27680	0.78	-1.1
6,160,855	-		PFLU_RS27680	0.78	+0.1
6,160,855	-		PFLU_RS27680	0.78	+0.9
6,160,855	-		PFLU_RS27680	0.78	-0.5
6,160,855	-		PFLU_RS27680	0.78	-2.2
6,160,855	-		PFLU_RS27680	0.78	-0.4
6,160,855	-		PFLU_RS27680	0.78	-1.7
6,160,911	+		PFLU_RS27680	0.89	+0.1
6,160,911	+		PFLU_RS27680	0.89	+1.3
6,160,911	+		PFLU_RS27680	0.89	-0.1
6,160,911	+		PFLU_RS27680	0.89	-1.2
6,160,911	+		PFLU_RS27680	0.89	-0.3
6,160,912	-		PFLU_RS27680	0.89	+2.1
6,160,912	-		PFLU_RS27680	0.89	+1.1
6,160,912	-		PFLU_RS27680	0.89	+0.7
6,160,912	-		PFLU_RS27680	0.89	-0.4
6,160,912	-		PFLU_RS27680	0.89	+0.1
6,160,912	-		PFLU_RS27680	0.89	+0.3
6,160,944	+				-1.5
6,160,945	-				-0.1
6,160,945	-				-0.8
6,160,954	+				+0.5
6,160,954	+				+2.5
6,160,954	+				-0.3
6,160,955	-				-1.1
6,160,955	-				-0.3
6,160,993	+				-0.7
6,160,993	+				+0.3
6,160,993	+				-2.7
6,160,993	+				+0.1
6,160,993	+				+0.4
6,160,993	+				+0.2
6,160,993	+				+1.2
6,160,993	+				-0.2
6,160,993	+				-0.6
6,160,993	+				-0.6
6,160,993	+				+0.7
6,160,993	+				-0.9
6,160,993	+				-0.2
6,160,993	+				+0.6
6,160,993	+				+2.0
6,160,993	+				-0.0
6,160,993	+				-0.4
6,160,994	-				+1.9
6,160,994	-				+0.1
6,160,994	-				+0.4
6,160,994	-				-1.4
6,160,994	-				+0.5
6,160,994	-				+1.2
6,160,994	-				-1.5
6,160,994	-				+1.2
6,160,994	-				+0.6
6,160,994	-				+0.5
6,160,994	-				-0.1
6,160,994	-				-0.1
6,160,994	-				-1.7
6,160,994	-				-0.3
6,160,994	-				+1.2
6,160,994	-				+1.9
6,160,994	-				+0.7
6,160,994	-				+0.3
6,160,994	-				+1.1
6,160,994	-				-0.2
6,160,994	-				-0.1
6,161,020	-				+1.5
6,161,063	+				-2.4
6,161,100	+				-0.9
6,161,100	+				+0.8
6,161,100	+				+2.2
6,161,100	+				-2.5
6,161,101	-				-1.3
6,161,101	-				-1.4
6,161,101	-				-1.4
6,161,119	+				-0.4
6,161,128	+				-1.2
6,161,128	+				-1.1
6,161,128	+				-0.0
6,161,128	+				+0.2
6,161,129	-				-1.5
6,161,129	-				-1.1
6,161,129	-				-0.1
6,161,132	+				-0.1
6,161,132	+				+0.5
6,161,132	+				+0.4
6,161,133	-				-0.5
6,161,133	-				-1.8
6,161,164	+				+0.3
6,161,164	+				-0.4
6,161,164	+				-1.0
6,161,164	+				+2.1
6,161,164	+				-1.3
6,161,164	+				-1.0
6,161,164	+				-1.9
6,161,164	+				+0.0
6,161,164	+				+2.2
6,161,164	+				+1.0
6,161,164	+				-1.4
6,161,164	+				-1.4
6,161,164	+				+0.7
6,161,165	-				-2.2
6,161,165	-				-1.3
6,161,165	-				-2.4
6,161,165	-				-1.4
6,161,165	-				+2.0
6,161,165	-				-1.6
6,161,165	-				+0.6
6,161,165	-				-1.1
6,161,167	+				-0.2
6,161,168	-				-0.9
6,161,184	+				-2.8
6,161,184	+				-0.1
6,161,184	+				-2.3
6,161,184	+				+0.6
6,161,184	+				+0.6
6,161,185	-				+1.2
6,161,185	-				-1.4
6,161,188	+				+0.2
6,161,188	+				-0.3
6,161,188	+				+1.0
6,161,210	+				+0.4
6,161,210	+				-2.3
6,161,210	+				+0.0
6,161,210	+				+0.0
6,161,211	-				-1.0
6,161,211	-				-1.5
6,161,475	+		PFLU_RS27685	0.11	-1.3
6,161,475	+		PFLU_RS27685	0.11	+0.5
6,161,475	+		PFLU_RS27685	0.11	-1.8
6,161,475	+		PFLU_RS27685	0.11	-3.7
6,161,475	+		PFLU_RS27685	0.11	-1.7
6,161,475	+		PFLU_RS27685	0.11	-2.5
6,161,475	+		PFLU_RS27685	0.11	-2.8
6,161,475	+		PFLU_RS27685	0.11	-0.3
6,161,476	-		PFLU_RS27685	0.11	-2.9
6,161,476	-		PFLU_RS27685	0.11	+0.9
6,161,476	-		PFLU_RS27685	0.11	-0.3
6,161,476	-		PFLU_RS27685	0.11	-1.7
6,161,476	-		PFLU_RS27685	0.11	-0.7
6,161,476	-		PFLU_RS27685	0.11	-0.1
6,161,476	-		PFLU_RS27685	0.11	-3.1
6,161,476	-		PFLU_RS27685	0.11	-0.7
6,161,502	+		PFLU_RS27685	0.12	-0.9
6,161,503	-		PFLU_RS27685	0.12	-2.7
6,161,649	+		PFLU_RS27685	0.19	-1.9
6,161,649	+		PFLU_RS27685	0.19	-1.7
6,161,649	+		PFLU_RS27685	0.19	-2.9
6,161,649	+		PFLU_RS27685	0.19	-2.2
6,161,649	+		PFLU_RS27685	0.19	-0.9
6,161,649	+		PFLU_RS27685	0.19	-1.4
6,161,649	+		PFLU_RS27685	0.19	-1.7
6,161,649	+		PFLU_RS27685	0.19	-0.4
6,161,649	+		PFLU_RS27685	0.19	-2.3
6,161,650	-		PFLU_RS27685	0.19	-0.2
6,161,650	-		PFLU_RS27685	0.19	+0.4
6,161,650	-		PFLU_RS27685	0.19	-1.9
6,161,650	-		PFLU_RS27685	0.19	-1.4
6,161,650	-		PFLU_RS27685	0.19	-0.1
6,161,650	-		PFLU_RS27685	0.19	-3.3
6,161,650	-		PFLU_RS27685	0.19	-1.9
6,161,650	-		PFLU_RS27685	0.19	+0.1
6,161,661	+		PFLU_RS27685	0.20	-0.4
6,161,661	+		PFLU_RS27685	0.20	-3.3
6,161,712	+		PFLU_RS27685	0.22	-1.7
6,161,712	+		PFLU_RS27685	0.22	-0.3
6,161,712	+		PFLU_RS27685	0.22	-1.6
6,161,712	+		PFLU_RS27685	0.22	-1.0
6,161,712	+		PFLU_RS27685	0.22	-0.5
6,161,713	-		PFLU_RS27685	0.22	-3.1
6,161,713	-		PFLU_RS27685	0.22	-2.0
6,161,713	-		PFLU_RS27685	0.22	-0.3
6,161,812	-		PFLU_RS27685	0.26	-1.1
6,161,858	+		PFLU_RS27685	0.29	-2.5
6,161,859	-		PFLU_RS27685	0.29	+0.7
6,161,859	-		PFLU_RS27685	0.29	-0.9
6,162,099	+		PFLU_RS27685	0.40	-3.0
6,162,099	+		PFLU_RS27685	0.40	-1.7
6,162,099	+		PFLU_RS27685	0.40	-2.7
6,162,099	+		PFLU_RS27685	0.40	+0.7
6,162,100	-		PFLU_RS27685	0.40	-3.0
6,162,100	-		PFLU_RS27685	0.40	-2.4
6,162,100	-		PFLU_RS27685	0.40	-2.5
6,162,100	-		PFLU_RS27685	0.40	-2.1
6,162,195	+		PFLU_RS27685	0.44	-3.5
6,162,195	+		PFLU_RS27685	0.44	-2.9
6,162,195	+		PFLU_RS27685	0.44	-1.7
6,162,196	-		PFLU_RS27685	0.44	-1.4
6,162,198	-		PFLU_RS27685	0.44	-1.4
6,162,359	+		PFLU_RS27685	0.52	-4.1
6,162,359	+		PFLU_RS27685	0.52	+0.7
6,162,360	-		PFLU_RS27685	0.52	-1.1
6,162,408	+		PFLU_RS27685	0.54	-0.8
6,162,408	+		PFLU_RS27685	0.54	-2.1
6,162,408	+		PFLU_RS27685	0.54	-0.9
6,162,408	+		PFLU_RS27685	0.54	-1.9
6,162,408	+		PFLU_RS27685	0.54	-3.6
6,162,408	+		PFLU_RS27685	0.54	-0.7
6,162,408	+		PFLU_RS27685	0.54	+0.7
6,162,408	+		PFLU_RS27685	0.54	-1.7
6,162,408	+		PFLU_RS27685	0.54	-0.1
6,162,409	-		PFLU_RS27685	0.54	-4.1
6,162,409	-		PFLU_RS27685	0.54	-3.1
6,162,409	-		PFLU_RS27685	0.54	-1.3
6,162,409	-		PFLU_RS27685	0.54	-1.0
6,162,409	-		PFLU_RS27685	0.54	+0.9
6,162,409	-		PFLU_RS27685	0.54	-1.5
6,162,409	-		PFLU_RS27685	0.54	-0.5
6,162,409	-		PFLU_RS27685	0.54	-1.1
6,162,409	-		PFLU_RS27685	0.54	-2.1
6,162,409	-		PFLU_RS27685	0.54	-0.4
6,162,409	-		PFLU_RS27685	0.54	-1.3
6,162,409	-		PFLU_RS27685	0.54	-1.3
6,162,409	-		PFLU_RS27685	0.54	-0.7
6,162,409	-		PFLU_RS27685	0.54	-1.5
6,162,593	+		PFLU_RS27685	0.62	-2.1
6,162,593	+		PFLU_RS27685	0.62	-3.0
6,162,702	+		PFLU_RS27685	0.67	-0.4
6,162,702	+		PFLU_RS27685	0.67	-0.5
6,162,702	+		PFLU_RS27685	0.67	-0.4
6,162,702	+		PFLU_RS27685	0.67	-3.1
6,162,703	-		PFLU_RS27685	0.67	-1.0
6,162,703	-		PFLU_RS27685	0.67	-2.4
6,162,703	-		PFLU_RS27685	0.67	-0.1
6,162,891	+		PFLU_RS27685	0.76	-2.1
6,162,891	+		PFLU_RS27685	0.76	-0.4
6,162,891	+		PFLU_RS27685	0.76	-2.9
6,162,891	+		PFLU_RS27685	0.76	-1.8
6,162,892	-		PFLU_RS27685	0.76	-2.3
6,162,907	+		PFLU_RS27685	0.77	-1.7
6,162,907	+		PFLU_RS27685	0.77	-3.2
6,162,907	+		PFLU_RS27685	0.77	-0.6
6,162,907	+		PFLU_RS27685	0.77	-2.6
6,162,907	+		PFLU_RS27685	0.77	-2.5
6,162,907	+		PFLU_RS27685	0.77	-1.9
6,162,907	+		PFLU_RS27685	0.77	-2.2
6,162,908	-		PFLU_RS27685	0.77	+0.1
6,162,908	-		PFLU_RS27685	0.77	-1.8
6,162,908	-		PFLU_RS27685	0.77	+0.3
6,162,908	-		PFLU_RS27685	0.77	-2.8
6,162,908	-		PFLU_RS27685	0.77	-1.7
6,162,908	-		PFLU_RS27685	0.77	-1.2
6,162,908	-		PFLU_RS27685	0.77	-1.5
6,162,908	-		PFLU_RS27685	0.77	-1.8
6,163,050	+		PFLU_RS27685	0.83	-2.7
6,163,050	+		PFLU_RS27685	0.83	-2.8
6,163,050	+		PFLU_RS27685	0.83	+0.0
6,163,051	-		PFLU_RS27685	0.83	-1.1
6,163,051	-		PFLU_RS27685	0.83	-2.2
6,163,057	+		PFLU_RS27685	0.84	-2.3
6,163,057	+		PFLU_RS27685	0.84	-2.0
6,163,058	-		PFLU_RS27685	0.84	-3.1
6,163,058	-		PFLU_RS27685	0.84	-1.5
6,163,058	-		PFLU_RS27685	0.84	-2.0
6,163,058	-		PFLU_RS27685	0.84	+0.3
6,163,093	+		PFLU_RS27685	0.85	-0.4
6,163,263	+				-0.9
6,163,335	-				-3.2
6,163,335	-				+0.3
6,163,346	+				-1.9
6,163,354	-				-2.8
6,163,354	-				-2.3
6,163,355	+				-1.4
6,163,356	-				-1.3
6,163,356	-				-2.9
6,163,397	+				-2.6
6,163,410	+				+1.1
6,163,410	+				+1.7
6,163,411	-				+0.9
6,163,411	-				+1.3
6,163,411	-				-0.3
6,163,411	-				-2.1
6,163,411	-				-0.1
6,163,411	-				+1.4
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