Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27020

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
6,027,488	+		PFLU_RS27010	0.66	+0.9
6,027,488	+		PFLU_RS27010	0.66	-0.1
6,027,488	+		PFLU_RS27010	0.66	+2.5
6,027,489	-		PFLU_RS27010	0.66	+0.3
6,027,489	-		PFLU_RS27010	0.66	+1.2
6,027,496	+		PFLU_RS27010	0.67	+0.6
6,027,496	+		PFLU_RS27010	0.67	-2.0
6,027,496	+		PFLU_RS27010	0.67	+0.5
6,027,496	+		PFLU_RS27010	0.67	+0.4
6,027,497	-		PFLU_RS27010	0.67	-1.8
6,027,497	-		PFLU_RS27010	0.67	-2.5
6,027,497	-		PFLU_RS27010	0.67	-1.0
6,027,497	-		PFLU_RS27010	0.67	+1.4
6,027,531	+		PFLU_RS27010	0.72	-0.4
6,027,531	+		PFLU_RS27010	0.72	-1.4
6,027,531	+		PFLU_RS27010	0.72	-0.3
6,027,531	+		PFLU_RS27010	0.72	-1.6
6,027,531	+		PFLU_RS27010	0.72	+0.9
6,027,531	+		PFLU_RS27010	0.72	-0.1
6,027,531	+		PFLU_RS27010	0.72	+0.3
6,027,531	+		PFLU_RS27010	0.72	+1.4
6,027,531	+		PFLU_RS27010	0.72	+0.9
6,027,531	+		PFLU_RS27010	0.72	-0.2
6,027,532	-		PFLU_RS27010	0.72	+0.2
6,027,532	-		PFLU_RS27010	0.72	+2.0
6,027,532	-		PFLU_RS27010	0.72	+0.2
6,027,532	-		PFLU_RS27010	0.72	+0.9
6,027,532	-		PFLU_RS27010	0.72	-1.3
6,027,532	-		PFLU_RS27010	0.72	+0.7
6,027,532	-		PFLU_RS27010	0.72	-1.1
6,027,601	-		PFLU_RS27010	0.81	+0.1
6,027,601	-		PFLU_RS27010	0.81	-0.1
6,027,601	-		PFLU_RS27010	0.81	+0.2
6,027,601	-		PFLU_RS27010	0.81	+0.3
6,027,601	-		PFLU_RS27010	0.81	-1.1
6,027,601	-		PFLU_RS27010	0.81	+0.5
6,027,625	+		PFLU_RS27010	0.84	-1.6
6,027,625	+		PFLU_RS27010	0.84	-1.9
6,027,625	+		PFLU_RS27010	0.84	+0.3
6,027,625	+		PFLU_RS27010	0.84	-0.7
6,027,625	+		PFLU_RS27010	0.84	-0.2
6,027,625	+		PFLU_RS27010	0.84	+0.8
6,027,632	+		PFLU_RS27010	0.85	+0.3
6,027,632	+		PFLU_RS27010	0.85	-1.1
6,027,632	+		PFLU_RS27010	0.85	-0.2
6,027,633	-		PFLU_RS27010	0.85	+0.9
6,027,633	-		PFLU_RS27010	0.85	+0.4
6,027,633	-		PFLU_RS27010	0.85	+0.7
6,027,633	-		PFLU_RS27010	0.85	-1.3
6,027,653	-		PFLU_RS27010	0.88	+2.2
6,027,653	-		PFLU_RS27010	0.88	+1.6
6,027,674	+				-0.1
6,027,674	+				-2.4
6,027,675	-				-1.7
6,027,675	-				-1.2
6,027,685	-				+0.2
6,027,685	-				+0.5
6,027,708	+				-0.8
6,027,708	+				+0.3
6,027,709	-				-0.1
6,027,709	-				+0.5
6,027,709	-				+0.9
6,027,731	+				+0.4
6,027,731	+				-0.3
6,027,732	-				+0.9
6,027,735	+				+1.4
6,027,735	+				-0.2
6,027,735	+				+1.6
6,027,735	+				-0.7
6,027,735	+				-3.0
6,027,735	+				+1.9
6,027,735	+				-2.5
6,027,736	-				+0.9
6,027,736	-				+0.7
6,027,750	+				-0.7
6,027,750	+				-0.8
6,027,750	+				-0.3
6,027,750	+				+0.5
6,027,750	+				+0.5
6,027,750	+				-0.3
6,027,751	-				+0.5
6,027,751	-				-0.0
6,027,751	-				+0.1
6,027,751	-				+0.7
6,027,754	+				+1.6
6,027,754	+				+1.9
6,027,754	+				+0.9
6,027,754	+				+1.6
6,027,754	+				+1.4
6,027,754	+				+0.3
6,027,754	+				+0.6
6,027,755	-				+0.7
6,027,755	-				+1.9
6,027,755	-				+0.8
6,027,775	+				+1.1
6,027,775	+				-1.1
6,027,775	+				+0.4
6,027,775	+				-1.3
6,027,775	+				+0.9
6,027,775	+				-1.5
6,027,775	+				-0.5
6,027,775	+				+0.5
6,027,776	-				-2.6
6,027,776	-				-0.1
6,027,776	-				-1.2
6,027,776	-				-0.7
6,027,776	-				-1.3
6,027,776	-				-0.4
6,027,776	-				-1.9
6,027,776	-				-1.6
6,027,776	-				-1.8
6,027,776	-				-0.6
6,027,776	-				-1.5
6,027,776	-				-0.1
6,027,776	-				-1.8
6,027,776	-				-0.1
6,027,776	-				+0.4
6,027,801	+				-0.3
6,027,801	+				-0.1
6,027,801	+				+2.1
6,027,801	+				+1.0
6,027,801	+				+0.3
6,027,801	+				+0.7
6,027,801	+				+0.1
6,027,802	-				+0.9
6,027,802	-				-1.3
6,027,802	-				-0.4
6,027,802	-				-1.9
6,027,802	-				-0.9
6,027,802	-				-2.3
6,027,802	-				-3.0
6,027,802	-				-1.3
6,027,802	-				-1.1
6,027,802	-				-1.9
6,027,827	+				-0.9
6,027,827	+				-0.5
6,027,828	-				-2.2
6,027,863	+				-0.7
6,027,863	+				+0.7
6,027,864	-				-0.8
6,027,864	-				-0.7
6,027,892	+				+0.5
6,027,892	+				-0.7
6,027,892	+				+1.3
6,027,893	-				-1.0
6,027,893	-				-1.7
6,027,893	-				+0.3
6,027,893	-				-0.5
6,027,917	+				-1.9
6,027,917	+				-2.1
6,027,917	+				-1.4
6,027,917	+				-0.9
6,027,917	+				-1.4
6,027,917	+				-1.5
6,027,917	+				-1.1
6,027,918	-				+0.3
6,027,918	-				+1.3
6,027,918	-				+1.3
6,028,502	-				+3.2
6,028,524	-				-0.7
6,028,524	-				-1.1
6,028,524	-				-2.4
6,028,524	-				+0.7
6,028,524	-				-2.8
6,028,524	-				+0.3
6,028,524	-				-2.6
6,028,524	-				-1.6
6,028,524	-				-0.9
6,028,524	-				-1.6
6,028,568	-				-1.1
6,028,589	-		PFLU_RS27020	0.11	-0.1
6,028,647	-		PFLU_RS27020	0.15	+0.9
6,028,647	-		PFLU_RS27020	0.15	-1.6
6,028,647	-		PFLU_RS27020	0.15	-1.0
6,028,647	-		PFLU_RS27020	0.15	-1.9
6,028,647	-		PFLU_RS27020	0.15	+2.4
6,028,647	-		PFLU_RS27020	0.15	-0.1
6,028,647	-		PFLU_RS27020	0.15	-1.8
6,028,666	-		PFLU_RS27020	0.16	+1.0
6,028,666	-		PFLU_RS27020	0.16	-1.4
6,028,666	-		PFLU_RS27020	0.16	+0.4
6,028,666	-		PFLU_RS27020	0.16	-1.0
6,028,666	-		PFLU_RS27020	0.16	+0.5
6,028,796	+		PFLU_RS27020	0.25	-3.2
6,028,796	+		PFLU_RS27020	0.25	+0.3
6,028,796	+		PFLU_RS27020	0.25	-1.9
6,028,796	+		PFLU_RS27020	0.25	-0.3
6,028,796	+		PFLU_RS27020	0.25	-0.9
6,028,796	+		PFLU_RS27020	0.25	-1.6
6,028,796	+		PFLU_RS27020	0.25	+0.1
6,028,796	+		PFLU_RS27020	0.25	-0.9
6,028,796	+		PFLU_RS27020	0.25	-1.7
6,028,796	+		PFLU_RS27020	0.25	-1.3
6,028,796	+		PFLU_RS27020	0.25	-2.2
6,028,797	-		PFLU_RS27020	0.26	-3.0
6,028,797	-		PFLU_RS27020	0.26	+0.3
6,028,797	-		PFLU_RS27020	0.26	-2.7
6,028,797	-		PFLU_RS27020	0.26	-2.7
6,028,797	-		PFLU_RS27020	0.26	+1.9
6,028,797	-		PFLU_RS27020	0.26	-1.1
6,028,839	+		PFLU_RS27020	0.29	-0.6
6,028,839	+		PFLU_RS27020	0.29	-1.4
6,028,839	+		PFLU_RS27020	0.29	-2.3
6,028,840	-		PFLU_RS27020	0.29	-1.4
6,028,840	-		PFLU_RS27020	0.29	-1.6
6,028,945	+		PFLU_RS27020	0.36	-0.7
6,028,945	+		PFLU_RS27020	0.36	-1.9
6,028,945	+		PFLU_RS27020	0.36	-1.3
6,028,945	+		PFLU_RS27020	0.36	-0.3
6,028,945	+		PFLU_RS27020	0.36	-2.9
6,028,945	+		PFLU_RS27020	0.36	-1.1
6,028,945	+		PFLU_RS27020	0.36	-1.2
6,028,945	+		PFLU_RS27020	0.36	-0.5
6,028,946	-		PFLU_RS27020	0.36	-1.3
6,028,946	-		PFLU_RS27020	0.36	-3.5
6,028,946	-		PFLU_RS27020	0.36	-2.3
6,029,015	+		PFLU_RS27020	0.41	+0.7
6,029,015	+		PFLU_RS27020	0.41	-3.1
6,029,015	+		PFLU_RS27020	0.41	-1.0
6,029,015	+		PFLU_RS27020	0.41	-2.1
6,029,015	+		PFLU_RS27020	0.41	-0.9
6,029,015	+		PFLU_RS27020	0.41	-1.1
6,029,015	+		PFLU_RS27020	0.41	-1.1
6,029,015	+		PFLU_RS27020	0.41	-2.4
6,029,015	+		PFLU_RS27020	0.41	+0.6
6,029,015	+		PFLU_RS27020	0.41	-1.8
6,029,015	+		PFLU_RS27020	0.41	+0.3
6,029,015	+		PFLU_RS27020	0.41	-0.3
6,029,015	+		PFLU_RS27020	0.41	-3.1
6,029,015	+		PFLU_RS27020	0.41	+0.7
6,029,015	+		PFLU_RS27020	0.41	-2.3
6,029,015	+		PFLU_RS27020	0.41	+1.9
6,029,015	+		PFLU_RS27020	0.41	-0.5
6,029,015	+		PFLU_RS27020	0.41	-1.8
6,029,015	+		PFLU_RS27020	0.41	-2.3
6,029,015	+		PFLU_RS27020	0.41	-2.0
6,029,016	-		PFLU_RS27020	0.41	-2.6
6,029,016	-		PFLU_RS27020	0.41	-2.9
6,029,016	-		PFLU_RS27020	0.41	+0.4
6,029,016	-		PFLU_RS27020	0.41	-1.7
6,029,016	-		PFLU_RS27020	0.41	-1.1
6,029,016	-		PFLU_RS27020	0.41	+0.5
6,029,016	-		PFLU_RS27020	0.41	-1.3
6,029,016	-		PFLU_RS27020	0.41	-2.1
6,029,066	+		PFLU_RS27020	0.45	-2.8
6,029,066	+		PFLU_RS27020	0.45	+1.9
6,029,066	+		PFLU_RS27020	0.45	-0.8
6,029,067	-		PFLU_RS27020	0.45	-0.7
6,029,166	+		PFLU_RS27020	0.52	-2.1
6,029,166	+		PFLU_RS27020	0.52	-1.3
6,029,166	+		PFLU_RS27020	0.52	-0.4
6,029,166	+		PFLU_RS27020	0.52	+0.6
6,029,167	-		PFLU_RS27020	0.52	+0.3
6,029,167	-		PFLU_RS27020	0.52	+1.6
6,029,167	-		PFLU_RS27020	0.52	-1.3
6,029,167	-		PFLU_RS27020	0.52	-1.1
6,029,167	-		PFLU_RS27020	0.52	-1.8
6,029,170	+		PFLU_RS27020	0.52	-1.3
6,029,170	+		PFLU_RS27020	0.52	-0.5
6,029,170	+		PFLU_RS27020	0.52	+0.1
6,029,170	+		PFLU_RS27020	0.52	-0.1
6,029,170	+		PFLU_RS27020	0.52	-0.4
6,029,170	+		PFLU_RS27020	0.52	-1.6
6,029,170	+		PFLU_RS27020	0.52	-0.1
6,029,170	+		PFLU_RS27020	0.52	-1.1
6,029,170	+		PFLU_RS27020	0.52	-0.7
6,029,170	+		PFLU_RS27020	0.52	-1.6
6,029,170	+		PFLU_RS27020	0.52	-0.3
6,029,171	-		PFLU_RS27020	0.52	-0.8
6,029,275	-		PFLU_RS27020	0.60	+0.6
6,029,293	-		PFLU_RS27020	0.61	-1.4
6,029,582	+		PFLU_RS27020	0.82	-1.3
6,029,582	+		PFLU_RS27020	0.82	+0.6
6,029,582	+		PFLU_RS27020	0.82	-1.4
6,029,582	+		PFLU_RS27020	0.82	-1.6
6,029,582	+		PFLU_RS27020	0.82	-0.8
6,029,582	+		PFLU_RS27020	0.82	-0.5
6,029,582	+		PFLU_RS27020	0.82	-1.1
6,029,582	+		PFLU_RS27020	0.82	-0.3
6,029,582	+		PFLU_RS27020	0.82	-2.6
6,029,582	+		PFLU_RS27020	0.82	-2.6
6,029,582	+		PFLU_RS27020	0.82	-1.6
6,029,583	-		PFLU_RS27020	0.82	-0.4
6,029,583	-		PFLU_RS27020	0.82	-1.4
6,029,583	-		PFLU_RS27020	0.82	-1.3
6,029,583	-		PFLU_RS27020	0.82	-0.1
6,029,583	-		PFLU_RS27020	0.82	-1.1
6,029,583	-		PFLU_RS27020	0.82	-0.2
6,029,657	+		PFLU_RS27020	0.87	-0.1
6,029,714	+				-0.4
6,029,714	+				+1.6
6,029,714	+				-1.4
6,029,714	+				-0.1
6,029,714	+				+0.0
6,029,715	-				-1.6
6,029,715	-				-0.4
6,029,715	-				+0.4
6,029,715	-				+0.3
6,029,715	-				-0.9
6,029,715	-				-2.5
6,029,715	-				-0.1
6,029,715	-				-1.1
6,029,715	-				+0.7
6,029,715	-				+0.1
6,029,739	+				-0.4
6,029,739	+				-1.3
6,029,739	+				-0.4
6,029,739	+				-2.4
6,029,739	+				-0.7
6,029,740	-				-1.7
6,029,740	-				+1.2
6,029,740	-				-0.4
6,029,740	-				+0.0
6,029,740	-				-1.7
6,029,740	-				+0.1
6,029,740	-				-0.4
6,029,754	+				-0.4
6,029,755	-				-1.9
6,029,755	-				+0.9
6,029,755	-				-0.1
6,029,806	-				-0.4
6,029,867	+				-0.2
6,029,867	+				-1.9
6,029,867	+				-1.1
6,029,868	-				-1.4
6,029,891	+				-0.1
6,029,891	+				-2.2
6,029,891	+				-1.6
6,029,891	+				+1.2
6,029,891	+				-1.5
6,029,891	+				-1.2
6,029,891	+				-0.1
6,029,891	+				+0.7
6,029,891	+				+0.5
6,029,891	+				+1.9
6,029,891	+				+0.6
6,029,891	+				+1.9
6,029,891	+				+0.4
6,029,891	+				-1.5
6,029,891	+				-0.3
6,029,891	+				+0.0
6,029,891	+				-1.9
6,029,891	+				+2.9
6,029,891	+				+2.3
6,029,891	+				-0.2
6,029,891	+				-0.0
6,029,891	+				-2.4
6,029,891	+				+0.3
6,029,892	-				-1.8
6,029,892	-				+0.6
6,029,892	-				+0.6
6,029,892	-				-0.1
6,029,892	-				-0.6
6,029,892	-				+1.7
6,029,892	-				-1.6
6,029,892	-				+0.5
6,029,892	-				+0.7
6,029,892	-				-0.8
6,029,892	-				-0.8
6,029,892	-				-1.1
6,029,892	-				-0.8
6,029,892	-				+0.9
6,029,893	+				+1.0
6,029,893	+				+1.1
6,029,893	+				-0.2
6,029,893	+				+0.7
6,029,893	+				+0.2
6,029,893	+				+0.1
6,029,893	+				+1.2
6,029,893	+				+1.3
6,029,893	+				-0.3
6,029,893	+				-0.6
6,029,893	+				-1.7
6,029,893	+				-0.0
6,029,894	-				+0.5
6,029,894	-				+0.7
6,029,894	-				-0.1
6,029,894	-				-0.4
6,029,894	-				-0.5
6,029,894	-				-0.0
6,029,894	-				+1.6
6,029,894	-				+1.1
6,029,894	-				-0.1
6,029,894	-				+1.5
6,029,894	-				-0.0
6,029,894	-				-0.9
6,029,923	+				-2.3
6,029,923	+				+0.7
6,029,923	+				-1.1
6,029,923	+				-2.1
6,029,923	+				-0.7
6,029,923	+				+0.8
6,029,923	+				-0.3
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