Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22645

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
5,097,424	+		PFLU_RS22640	0.48	+0.6
5,097,424	+		PFLU_RS22640	0.48	-2.1
5,097,424	+		PFLU_RS22640	0.48	+0.2
5,097,424	+		PFLU_RS22640	0.48	-1.2
5,097,424	+		PFLU_RS22640	0.48	-1.2
5,097,425	-		PFLU_RS22640	0.48	-0.4
5,097,425	-		PFLU_RS22640	0.48	+0.4
5,097,425	-		PFLU_RS22640	0.48	+0.9
5,097,446	+		PFLU_RS22640	0.49	-1.4
5,097,446	+		PFLU_RS22640	0.49	-1.3
5,097,447	-		PFLU_RS22640	0.49	+0.4
5,097,447	-		PFLU_RS22640	0.49	-0.4
5,097,447	-		PFLU_RS22640	0.49	-1.7
5,097,536	+		PFLU_RS22640	0.56	-2.2
5,097,550	+		PFLU_RS22640	0.56	-2.7
5,097,551	-		PFLU_RS22640	0.57	+1.4
5,097,551	-		PFLU_RS22640	0.57	-1.8
5,097,570	+		PFLU_RS22640	0.58	-1.3
5,097,570	+		PFLU_RS22640	0.58	-0.4
5,097,576	-		PFLU_RS22640	0.58	-0.5
5,097,730	+		PFLU_RS22640	0.69	-0.4
5,097,730	+		PFLU_RS22640	0.69	-1.1
5,097,730	+		PFLU_RS22640	0.69	-0.5
5,097,730	+		PFLU_RS22640	0.69	-1.7
5,097,730	+		PFLU_RS22640	0.69	+0.1
5,097,730	+		PFLU_RS22640	0.69	-1.8
5,097,731	-		PFLU_RS22640	0.69	-0.5
5,097,731	-		PFLU_RS22640	0.69	+3.4
5,097,731	-		PFLU_RS22640	0.69	+0.1
5,097,731	-		PFLU_RS22640	0.69	+0.2
5,097,731	-		PFLU_RS22640	0.69	+0.7
5,097,731	-		PFLU_RS22640	0.69	-1.2
5,097,731	-		PFLU_RS22640	0.69	-0.6
5,097,841	+		PFLU_RS22640	0.77	-2.8
5,097,842	-		PFLU_RS22640	0.77	-2.1
5,097,842	-		PFLU_RS22640	0.77	-2.7
5,097,968	-		PFLU_RS22640	0.86	-1.9
5,097,988	-		PFLU_RS22640	0.87	+0.1
5,098,096	+				-1.2
5,098,096	+				+0.2
5,098,097	-				+1.4
5,098,097	-				-1.3
5,098,097	-				-1.5
5,098,097	-				-1.2
5,098,134	-				+0.7
5,098,180	-				-2.5
5,098,182	+				+0.7
5,098,182	+				+0.6
5,098,182	+				+0.1
5,098,182	+				+0.6
5,098,182	+				+1.0
5,098,182	+				-1.8
5,098,182	+				+0.6
5,098,183	-				-2.3
5,098,183	-				-3.0
5,098,183	-				-1.9
5,098,183	-				-2.8
5,098,183	-				-3.5
5,098,194	-				-1.1
5,098,236	+				-0.9
5,098,236	+				+0.3
5,098,238	+				-1.8
5,098,238	+				+2.0
5,098,238	+				-0.7
5,098,267	+				+0.7
5,098,555	+		PFLU_RS22645	0.29	-0.4
5,098,555	+		PFLU_RS22645	0.29	-2.7
5,098,555	+		PFLU_RS22645	0.29	-0.3
5,098,555	+		PFLU_RS22645	0.29	-0.6
5,098,556	-		PFLU_RS22645	0.29	-3.5
5,098,556	-		PFLU_RS22645	0.29	-2.4
5,098,556	-		PFLU_RS22645	0.29	-3.0
5,098,556	-		PFLU_RS22645	0.29	-2.1
5,098,570	+		PFLU_RS22645	0.31	-2.1
5,098,570	+		PFLU_RS22645	0.31	-2.5
5,098,571	-		PFLU_RS22645	0.31	-1.2
5,098,571	-		PFLU_RS22645	0.31	-2.6
5,098,571	-		PFLU_RS22645	0.31	-2.8
5,098,573	+		PFLU_RS22645	0.31	-2.3
5,098,573	+		PFLU_RS22645	0.31	-2.6
5,098,573	+		PFLU_RS22645	0.31	-2.7
5,098,573	+		PFLU_RS22645	0.31	-3.6
5,098,573	+		PFLU_RS22645	0.31	-1.4
5,098,573	+		PFLU_RS22645	0.31	-1.2
5,098,573	+		PFLU_RS22645	0.31	-2.1
5,098,573	+		PFLU_RS22645	0.31	-2.7
5,098,573	+		PFLU_RS22645	0.31	-0.2
5,098,574	-		PFLU_RS22645	0.31	-2.9
5,098,574	-		PFLU_RS22645	0.31	-3.4
5,098,574	-		PFLU_RS22645	0.31	-1.4
5,098,574	-		PFLU_RS22645	0.31	-0.5
5,098,574	-		PFLU_RS22645	0.31	-2.3
5,098,574	-		PFLU_RS22645	0.31	-2.8
5,098,574	-		PFLU_RS22645	0.31	-3.0
5,098,585	+		PFLU_RS22645	0.32	-3.1
5,098,585	+		PFLU_RS22645	0.32	-2.1
5,098,585	+		PFLU_RS22645	0.32	+0.8
5,098,585	+		PFLU_RS22645	0.32	-3.2
5,098,585	+		PFLU_RS22645	0.32	-2.6
5,098,586	-		PFLU_RS22645	0.32	-2.2
5,098,586	-		PFLU_RS22645	0.32	-4.4
5,098,629	+		PFLU_RS22645	0.37	-0.3
5,098,629	+		PFLU_RS22645	0.37	+1.4
5,098,629	+		PFLU_RS22645	0.37	-0.6
5,098,629	+		PFLU_RS22645	0.37	-2.2
5,098,630	-		PFLU_RS22645	0.37	-3.7
5,098,630	-		PFLU_RS22645	0.37	-3.0
5,098,630	-		PFLU_RS22645	0.37	-1.4
5,098,630	-		PFLU_RS22645	0.37	-1.8
5,098,630	-		PFLU_RS22645	0.37	-2.7
5,098,630	-		PFLU_RS22645	0.37	-2.3
5,098,630	-		PFLU_RS22645	0.37	-3.4
5,098,687	+		PFLU_RS22645	0.43	-0.9
5,098,687	+		PFLU_RS22645	0.43	-2.2
5,098,687	+		PFLU_RS22645	0.43	-2.5
5,098,688	-		PFLU_RS22645	0.43	-3.5
5,098,688	-		PFLU_RS22645	0.43	-0.2
5,098,688	-		PFLU_RS22645	0.43	-2.3
5,098,688	-		PFLU_RS22645	0.43	-1.4
5,098,732	+		PFLU_RS22645	0.48	-0.9
5,098,732	+		PFLU_RS22645	0.48	-1.2
5,098,732	+		PFLU_RS22645	0.48	-0.8
5,098,732	+		PFLU_RS22645	0.48	-2.1
5,098,732	+		PFLU_RS22645	0.48	-1.4
5,098,732	+		PFLU_RS22645	0.48	-2.6
5,098,732	+		PFLU_RS22645	0.48	+0.4
5,098,732	+		PFLU_RS22645	0.48	-2.8
5,098,732	+		PFLU_RS22645	0.48	-1.4
5,098,732	+		PFLU_RS22645	0.48	-2.2
5,098,732	+		PFLU_RS22645	0.48	-2.8
5,098,733	-		PFLU_RS22645	0.48	-1.6
5,098,733	-		PFLU_RS22645	0.48	-1.2
5,098,733	-		PFLU_RS22645	0.48	-2.7
5,098,733	-		PFLU_RS22645	0.48	-1.4
5,098,733	-		PFLU_RS22645	0.48	-2.9
5,098,733	-		PFLU_RS22645	0.48	-3.1
5,098,733	-		PFLU_RS22645	0.48	-1.6
5,098,733	-		PFLU_RS22645	0.48	-1.4
5,098,733	-		PFLU_RS22645	0.48	-2.5
5,098,733	-		PFLU_RS22645	0.48	-2.8
5,098,828	+		PFLU_RS22645	0.58	-3.1
5,098,828	+		PFLU_RS22645	0.58	-0.6
5,098,828	+		PFLU_RS22645	0.58	+0.5
5,098,828	+		PFLU_RS22645	0.58	-1.8
5,098,828	+		PFLU_RS22645	0.58	-1.3
5,098,828	+		PFLU_RS22645	0.58	-1.2
5,098,828	+		PFLU_RS22645	0.58	-0.8
5,098,828	+		PFLU_RS22645	0.58	+0.4
5,098,828	+		PFLU_RS22645	0.58	-2.2
5,098,829	-		PFLU_RS22645	0.58	+1.4
5,098,829	-		PFLU_RS22645	0.58	-0.9
5,098,829	-		PFLU_RS22645	0.58	-1.2
5,098,829	-		PFLU_RS22645	0.58	-0.7
5,098,829	-		PFLU_RS22645	0.58	-2.4
5,098,829	-		PFLU_RS22645	0.58	-1.8
5,098,873	+		PFLU_RS22645	0.63	-1.4
5,098,873	+		PFLU_RS22645	0.63	-1.6
5,098,873	+		PFLU_RS22645	0.63	-1.2
5,098,873	+		PFLU_RS22645	0.63	-3.8
5,098,873	+		PFLU_RS22645	0.63	-2.3
5,098,873	+		PFLU_RS22645	0.63	-1.6
5,098,873	+		PFLU_RS22645	0.63	-1.4
5,098,873	+		PFLU_RS22645	0.63	+0.1
5,098,873	+		PFLU_RS22645	0.63	-0.8
5,098,873	+		PFLU_RS22645	0.63	-2.7
5,098,873	+		PFLU_RS22645	0.63	-1.9
5,098,874	-		PFLU_RS22645	0.63	-2.2
5,098,874	-		PFLU_RS22645	0.63	-2.7
5,098,874	-		PFLU_RS22645	0.63	-0.2
5,098,874	-		PFLU_RS22645	0.63	-1.8
5,098,874	-		PFLU_RS22645	0.63	-3.4
5,098,874	-		PFLU_RS22645	0.63	-2.9
5,098,874	-		PFLU_RS22645	0.63	-3.6
5,098,874	-		PFLU_RS22645	0.63	-3.0
5,098,874	-		PFLU_RS22645	0.63	-1.8
5,098,874	-		PFLU_RS22645	0.63	+0.3
5,098,984	+		PFLU_RS22645	0.75	-1.4
5,098,984	+		PFLU_RS22645	0.75	-0.9
5,098,984	+		PFLU_RS22645	0.75	-2.8
5,098,985	-		PFLU_RS22645	0.75	-2.6
5,098,985	-		PFLU_RS22645	0.75	-3.5
5,098,985	-		PFLU_RS22645	0.75	-1.8
5,098,985	-		PFLU_RS22645	0.75	-1.8
5,098,985	-		PFLU_RS22645	0.75	-1.6
5,098,985	-		PFLU_RS22645	0.75	-2.8
5,098,985	-		PFLU_RS22645	0.75	-1.6
5,099,023	+		PFLU_RS22645	0.79	-1.9
5,099,023	+		PFLU_RS22645	0.79	+1.2
5,099,023	+		PFLU_RS22645	0.79	+0.1
5,099,023	+		PFLU_RS22645	0.79	-2.3
5,099,023	+		PFLU_RS22645	0.79	-0.6
5,099,023	+		PFLU_RS22645	0.79	-2.8
5,099,024	-		PFLU_RS22645	0.79	-1.1
5,099,024	-		PFLU_RS22645	0.79	-2.4
5,099,024	-		PFLU_RS22645	0.79	-0.6
5,099,024	-		PFLU_RS22645	0.79	-2.5
5,099,114	-		PFLU_RS22645	0.88	-0.2
5,099,114	-		PFLU_RS22645	0.88	-1.1
5,099,149	+				-2.9
5,099,150	-				-0.2
5,099,150	-				-3.4
5,099,301	+				-1.0
5,099,301	+				+0.4
5,099,301	+				-0.8
5,099,301	+				+1.1
5,099,301	+				-0.7
5,099,301	+				+1.1
5,099,301	+				+1.8
5,099,301	+				+0.3
5,099,302	-				-1.2
5,099,302	-				+0.2
5,099,322	+				+0.4
5,099,368	-				-1.0
5,099,418	+				+0.3
5,099,418	+				+0.9
5,099,418	+				+1.4
5,099,418	+				+3.4
5,099,418	+				-0.1
5,099,419	-				-1.2
5,099,419	-				+0.4
5,099,442	+				-0.4
5,099,443	-				+1.0
5,099,443	-				-0.4
5,099,514	+		PFLU_RS22650	0.13	-0.0
5,099,514	+		PFLU_RS22650	0.13	-0.2
5,099,514	+		PFLU_RS22650	0.13	-2.7
5,099,514	+		PFLU_RS22650	0.13	-0.1
5,099,514	+		PFLU_RS22650	0.13	-0.9
5,099,514	+		PFLU_RS22650	0.13	-2.1
5,099,514	+		PFLU_RS22650	0.13	-1.4
5,099,514	+		PFLU_RS22650	0.13	+1.2
5,099,514	+		PFLU_RS22650	0.13	-0.9
5,099,514	+		PFLU_RS22650	0.13	+1.1
5,099,514	+		PFLU_RS22650	0.13	-1.6
5,099,514	+		PFLU_RS22650	0.13	+2.8
5,099,514	+		PFLU_RS22650	0.13	-1.4
5,099,515	-		PFLU_RS22650	0.13	-1.2
5,099,515	-		PFLU_RS22650	0.13	+0.9
5,099,515	-		PFLU_RS22650	0.13	-2.1
5,099,515	-		PFLU_RS22650	0.13	+0.8
5,099,515	-		PFLU_RS22650	0.13	+0.5
5,099,515	-		PFLU_RS22650	0.13	-2.4
5,099,515	-		PFLU_RS22650	0.13	+1.6
5,099,515	-		PFLU_RS22650	0.13	+1.2
5,099,515	-		PFLU_RS22650	0.13	-1.1
5,099,515	-		PFLU_RS22650	0.13	-0.0
5,099,515	-		PFLU_RS22650	0.13	-0.7
5,099,541	+		PFLU_RS22650	0.15	-0.2
5,099,542	-		PFLU_RS22650	0.15	+0.7
5,099,542	-		PFLU_RS22650	0.15	-0.9
5,099,592	+		PFLU_RS22650	0.18	-1.1
5,099,592	+		PFLU_RS22650	0.18	+1.4
5,099,592	+		PFLU_RS22650	0.18	-0.1
5,099,604	+		PFLU_RS22650	0.18	-2.5
5,099,604	+		PFLU_RS22650	0.18	-0.4
5,099,605	-		PFLU_RS22650	0.18	+1.6
5,099,605	-		PFLU_RS22650	0.18	-0.9
5,099,605	-		PFLU_RS22650	0.18	-2.1
5,099,605	-		PFLU_RS22650	0.18	+0.9
5,099,605	-		PFLU_RS22650	0.18	-1.3
5,100,010	+		PFLU_RS22650	0.40	+1.5
5,100,010	+		PFLU_RS22650	0.40	-0.2
5,100,010	+		PFLU_RS22650	0.40	+1.4
5,100,010	+		PFLU_RS22650	0.40	-0.9
5,100,010	+		PFLU_RS22650	0.40	-1.5
5,100,010	+		PFLU_RS22650	0.40	+0.4
5,100,011	-		PFLU_RS22650	0.40	-0.3
5,100,011	-		PFLU_RS22650	0.40	-0.8
5,100,011	-		PFLU_RS22650	0.40	+1.1
5,100,011	-		PFLU_RS22650	0.40	+0.0
5,100,011	-		PFLU_RS22650	0.40	-0.4
5,100,018	+		PFLU_RS22650	0.40	-0.1
5,100,018	+		PFLU_RS22650	0.40	+1.5
5,100,018	+		PFLU_RS22650	0.40	-0.5
5,100,018	+		PFLU_RS22650	0.40	-1.9
5,100,018	+		PFLU_RS22650	0.40	+0.6
5,100,018	+		PFLU_RS22650	0.40	+1.4
5,100,019	-		PFLU_RS22650	0.40	-1.4
5,100,019	-		PFLU_RS22650	0.40	-0.8
5,100,019	-		PFLU_RS22650	0.40	+0.1
5,100,019	-		PFLU_RS22650	0.40	-0.6
5,100,019	-		PFLU_RS22650	0.40	+1.0
5,100,019	-		PFLU_RS22650	0.40	-1.3
5,100,019	-		PFLU_RS22650	0.40	-0.7
5,100,019	-		PFLU_RS22650	0.40	+0.7
5,100,029	+		PFLU_RS22650	0.41	+0.5
5,100,047	-		PFLU_RS22650	0.42	-1.4
5,100,047	-		PFLU_RS22650	0.42	+0.3
5,100,129	+		PFLU_RS22650	0.46	-0.5
5,100,130	-		PFLU_RS22650	0.46	-0.9