Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19565

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
4,425,487	+		PFLU_RS19560	0.57	-0.5
4,425,487	+		PFLU_RS19560	0.57	+0.3
4,425,487	+		PFLU_RS19560	0.57	+0.1
4,425,487	+		PFLU_RS19560	0.57	+0.1
4,425,487	+		PFLU_RS19560	0.57	+0.4
4,425,487	+		PFLU_RS19560	0.57	-1.4
4,425,487	+		PFLU_RS19560	0.57	+0.4
4,425,488	-		PFLU_RS19560	0.57	+1.1
4,425,488	-		PFLU_RS19560	0.57	-0.3
4,425,488	-		PFLU_RS19560	0.57	-0.0
4,425,488	-		PFLU_RS19560	0.57	-1.6
4,425,488	-		PFLU_RS19560	0.57	+0.3
4,425,488	-		PFLU_RS19560	0.57	-0.1
4,425,488	-		PFLU_RS19560	0.57	-0.7
4,425,531	+		PFLU_RS19560	0.60	-0.1
4,425,531	+		PFLU_RS19560	0.60	+0.4
4,425,532	-		PFLU_RS19560	0.60	+0.2
4,425,532	-		PFLU_RS19560	0.60	-1.5
4,425,631	+		PFLU_RS19560	0.66	-2.5
4,425,632	-		PFLU_RS19560	0.66	-0.6
4,425,632	-		PFLU_RS19560	0.66	+0.1
4,425,632	-		PFLU_RS19560	0.66	+2.1
4,425,632	-		PFLU_RS19560	0.66	-0.9
4,425,632	-		PFLU_RS19560	0.66	+0.2
4,425,655	+		PFLU_RS19560	0.67	+0.4
4,425,655	+		PFLU_RS19560	0.67	-1.5
4,425,656	-		PFLU_RS19560	0.67	-1.3
4,425,699	+		PFLU_RS19560	0.70	+0.2
4,425,700	-		PFLU_RS19560	0.70	+2.4
4,425,727	-		PFLU_RS19560	0.71	+2.5
4,425,758	+		PFLU_RS19560	0.73	-0.9
4,425,964	+		PFLU_RS19560	0.86	+1.4
4,425,965	-		PFLU_RS19560	0.86	-0.4
4,426,000	+		PFLU_RS19560	0.88	+1.1
4,426,156	+				-1.7
4,426,156	+				+0.5
4,426,156	+				-1.5
4,426,156	+				-1.9
4,426,156	+				+1.1
4,426,156	+				-1.5
4,426,156	+				+0.7
4,426,156	+				-0.7
4,426,156	+				+0.5
4,426,156	+				-0.5
4,426,156	+				+0.3
4,426,156	+				+1.0
4,426,156	+				-0.7
4,426,157	-				+0.9
4,426,157	-				+0.4
4,426,157	-				+0.3
4,426,157	-				+1.0
4,426,157	-				-0.5
4,426,157	-				-0.9
4,426,157	-				+1.1
4,426,157	-				+0.1
4,426,157	-				-1.2
4,426,157	-				+0.1
4,426,157	-				-0.2
4,426,157	-				+0.8
4,426,157	-				+0.7
4,426,184	-				+1.9
4,426,184	-				-0.0
4,426,240	+				+0.2
4,426,241	-				+0.4
4,426,241	-				+0.9
4,426,353	+		PFLU_RS19565	0.10	-0.7
4,426,353	+		PFLU_RS19565	0.10	+0.9
4,426,354	-		PFLU_RS19565	0.10	-0.3
4,426,365	+		PFLU_RS19565	0.11	-1.0
4,426,365	+		PFLU_RS19565	0.11	-1.2
4,426,366	-		PFLU_RS19565	0.11	-2.5
4,426,386	+		PFLU_RS19565	0.12	+0.3
4,426,386	+		PFLU_RS19565	0.12	+0.4
4,426,386	+		PFLU_RS19565	0.12	-0.1
4,426,387	-		PFLU_RS19565	0.12	+1.1
4,426,463	-		PFLU_RS19565	0.17	-0.1
4,426,463	-		PFLU_RS19565	0.17	-0.1
4,426,509	+		PFLU_RS19565	0.20	+0.6
4,426,509	+		PFLU_RS19565	0.20	-1.0
4,426,509	+		PFLU_RS19565	0.20	-0.1
4,426,509	+		PFLU_RS19565	0.20	-0.1
4,426,510	-		PFLU_RS19565	0.20	-1.2
4,426,574	+		PFLU_RS19565	0.25	-0.9
4,426,574	+		PFLU_RS19565	0.25	-0.5
4,426,575	-		PFLU_RS19565	0.25	+1.3
4,426,575	-		PFLU_RS19565	0.25	-1.3
4,426,575	-		PFLU_RS19565	0.25	+0.0
4,426,575	-		PFLU_RS19565	0.25	+0.3
4,426,581	+		PFLU_RS19565	0.25	+1.1
4,426,581	+		PFLU_RS19565	0.25	-0.9
4,426,581	+		PFLU_RS19565	0.25	-3.3
4,426,581	+		PFLU_RS19565	0.25	+0.6
4,426,581	+		PFLU_RS19565	0.25	-1.1
4,426,581	+		PFLU_RS19565	0.25	-0.5
4,426,581	+		PFLU_RS19565	0.25	+0.4
4,426,581	+		PFLU_RS19565	0.25	+1.4
4,426,581	+		PFLU_RS19565	0.25	+1.1
4,426,581	+		PFLU_RS19565	0.25	+0.9
4,426,582	-		PFLU_RS19565	0.25	-0.4
4,426,582	-		PFLU_RS19565	0.25	-0.3
4,426,582	-		PFLU_RS19565	0.25	+1.0
4,426,582	-		PFLU_RS19565	0.25	+0.4
4,426,582	-		PFLU_RS19565	0.25	-1.2
4,426,582	-		PFLU_RS19565	0.25	-1.5
4,426,656	+		PFLU_RS19565	0.30	+0.9
4,426,768	+		PFLU_RS19565	0.37	-1.2
4,426,769	-		PFLU_RS19565	0.37	-1.9
4,426,800	+		PFLU_RS19565	0.39	+1.0
4,426,800	+		PFLU_RS19565	0.39	+0.3
4,426,800	+		PFLU_RS19565	0.39	+0.4
4,426,800	+		PFLU_RS19565	0.39	-0.5
4,426,801	-		PFLU_RS19565	0.40	-0.6
4,426,801	-		PFLU_RS19565	0.40	-0.0
4,426,857	+		PFLU_RS19565	0.43	-1.7
4,426,857	+		PFLU_RS19565	0.43	-0.7
4,426,857	+		PFLU_RS19565	0.43	-0.0
4,426,857	+		PFLU_RS19565	0.43	-1.3
4,426,857	+		PFLU_RS19565	0.43	+0.2
4,426,857	+		PFLU_RS19565	0.43	-0.5
4,426,857	+		PFLU_RS19565	0.43	-0.7
4,426,857	+		PFLU_RS19565	0.43	-1.9
4,426,857	+		PFLU_RS19565	0.43	+0.7
4,426,857	+		PFLU_RS19565	0.43	-2.0
4,426,858	-		PFLU_RS19565	0.43	-0.4
4,426,858	-		PFLU_RS19565	0.43	-0.0
4,426,902	+		PFLU_RS19565	0.46	+2.1
4,426,903	-		PFLU_RS19565	0.46	-0.8
4,426,903	-		PFLU_RS19565	0.46	-1.4
4,426,989	+		PFLU_RS19565	0.52	+1.0
4,426,989	+		PFLU_RS19565	0.52	-0.2
4,426,989	+		PFLU_RS19565	0.52	+1.9
4,426,989	+		PFLU_RS19565	0.52	-0.1
4,426,990	-		PFLU_RS19565	0.52	+0.6
4,426,990	-		PFLU_RS19565	0.52	+1.9
4,426,998	+		PFLU_RS19565	0.52	-2.2
4,426,998	+		PFLU_RS19565	0.52	+0.4
4,426,998	+		PFLU_RS19565	0.52	-1.2
4,426,998	+		PFLU_RS19565	0.52	+0.5
4,426,999	-		PFLU_RS19565	0.53	+0.9
4,426,999	-		PFLU_RS19565	0.53	-0.5
4,426,999	-		PFLU_RS19565	0.53	-2.7
4,427,010	+		PFLU_RS19565	0.53	+1.4
4,427,011	-		PFLU_RS19565	0.53	+0.1
4,427,089	+		PFLU_RS19565	0.58	+0.7
4,427,089	+		PFLU_RS19565	0.58	+0.5
4,427,089	+		PFLU_RS19565	0.58	+0.8
4,427,089	+		PFLU_RS19565	0.58	+0.4
4,427,089	+		PFLU_RS19565	0.58	+0.5
4,427,089	+		PFLU_RS19565	0.58	-1.2
4,427,089	+		PFLU_RS19565	0.58	-0.4
4,427,089	+		PFLU_RS19565	0.58	+0.6
4,427,089	+		PFLU_RS19565	0.58	-0.9
4,427,089	+		PFLU_RS19565	0.58	+0.9
4,427,089	+		PFLU_RS19565	0.58	-2.1
4,427,089	+		PFLU_RS19565	0.58	+0.9
4,427,089	+		PFLU_RS19565	0.58	+0.4
4,427,090	-		PFLU_RS19565	0.59	-1.2
4,427,090	-		PFLU_RS19565	0.59	-0.9
4,427,090	-		PFLU_RS19565	0.59	-0.6
4,427,090	-		PFLU_RS19565	0.59	+0.9
4,427,157	+		PFLU_RS19565	0.63	+0.1
4,427,158	-		PFLU_RS19565	0.63	+0.2
4,427,158	-		PFLU_RS19565	0.63	-0.4
4,427,158	-		PFLU_RS19565	0.63	-2.0
4,427,158	-		PFLU_RS19565	0.63	+0.1
4,427,160	+		PFLU_RS19565	0.63	+0.8
4,427,160	+		PFLU_RS19565	0.63	-0.5
4,427,160	+		PFLU_RS19565	0.63	-1.2
4,427,160	+		PFLU_RS19565	0.63	-0.0
4,427,160	+		PFLU_RS19565	0.63	+0.4
4,427,160	+		PFLU_RS19565	0.63	+0.3
4,427,160	+		PFLU_RS19565	0.63	-0.1
4,427,160	+		PFLU_RS19565	0.63	+0.5
4,427,160	+		PFLU_RS19565	0.63	-0.0
4,427,160	+		PFLU_RS19565	0.63	-2.7
4,427,160	+		PFLU_RS19565	0.63	+0.1
4,427,160	+		PFLU_RS19565	0.63	-1.7
4,427,161	-		PFLU_RS19565	0.63	+1.1
4,427,161	-		PFLU_RS19565	0.63	+0.5
4,427,161	-		PFLU_RS19565	0.63	+0.4
4,427,161	-		PFLU_RS19565	0.63	+0.5
4,427,161	-		PFLU_RS19565	0.63	+0.7
4,427,287	+		PFLU_RS19565	0.71	-0.6
4,427,287	+		PFLU_RS19565	0.71	-1.2
4,427,288	-		PFLU_RS19565	0.72	+0.1
4,427,288	-		PFLU_RS19565	0.72	+1.4
4,427,288	-		PFLU_RS19565	0.72	-0.9
4,427,437	-		PFLU_RS19565	0.81	-0.4
4,427,463	+		PFLU_RS19565	0.83	+1.9
4,427,463	+		PFLU_RS19565	0.83	+0.5
4,427,463	+		PFLU_RS19565	0.83	+1.1
4,427,463	+		PFLU_RS19565	0.83	-1.0
4,427,463	+		PFLU_RS19565	0.83	+0.4
4,427,464	-		PFLU_RS19565	0.83	-1.5
4,427,464	-		PFLU_RS19565	0.83	+0.8
4,427,464	-		PFLU_RS19565	0.83	+1.1
4,427,464	-		PFLU_RS19565	0.83	+1.9
4,427,464	-		PFLU_RS19565	0.83	+2.9
4,427,464	-		PFLU_RS19565	0.83	+0.1
4,427,466	+		PFLU_RS19565	0.83	+0.8
4,427,466	+		PFLU_RS19565	0.83	-0.6
4,427,466	+		PFLU_RS19565	0.83	+0.4
4,427,466	+		PFLU_RS19565	0.83	+0.2
4,427,466	+		PFLU_RS19565	0.83	+1.3
4,427,466	+		PFLU_RS19565	0.83	+0.1
4,427,466	+		PFLU_RS19565	0.83	-2.3
4,427,466	+		PFLU_RS19565	0.83	+0.7
4,427,466	+		PFLU_RS19565	0.83	-0.7
4,427,466	+		PFLU_RS19565	0.83	-0.0
4,427,466	+		PFLU_RS19565	0.83	-1.5
4,427,467	-		PFLU_RS19565	0.83	+0.6
4,427,467	-		PFLU_RS19565	0.83	-0.5
4,427,467	-		PFLU_RS19565	0.83	-0.0
4,427,467	-		PFLU_RS19565	0.83	+0.6
4,427,467	-		PFLU_RS19565	0.83	+3.3
4,427,467	-		PFLU_RS19565	0.83	+0.7
4,427,467	-		PFLU_RS19565	0.83	+0.2
4,427,467	-		PFLU_RS19565	0.83	+0.4
4,427,467	-		PFLU_RS19565	0.83	+0.7
4,427,467	-		PFLU_RS19565	0.83	-0.3
4,427,467	-		PFLU_RS19565	0.83	+0.1
4,427,467	-		PFLU_RS19565	0.83	-0.8
4,427,467	-		PFLU_RS19565	0.83	+0.3
4,427,467	-		PFLU_RS19565	0.83	-1.7
4,427,467	-		PFLU_RS19565	0.83	-0.9
4,427,467	-		PFLU_RS19565	0.83	+0.2
4,427,467	-		PFLU_RS19565	0.83	-3.0
4,427,467	-		PFLU_RS19565	0.83	-0.0
4,427,467	-		PFLU_RS19565	0.83	+1.2
4,427,467	-		PFLU_RS19565	0.83	-0.0
4,427,467	-		PFLU_RS19565	0.83	-1.3
4,427,467	-		PFLU_RS19565	0.83	+0.0
4,427,467	-		PFLU_RS19565	0.83	+0.5
4,427,570	+				+1.3
4,427,570	+				-1.8
4,427,570	+				+1.7
4,427,570	+				+0.6
4,427,570	+				-0.8
4,427,570	+				+0.1
4,427,570	+				-0.9
4,427,571	-				+1.1
4,427,639	+				-0.4
4,427,703	-				-2.3
4,427,703	-				+0.8
4,427,923	+				+1.1
4,427,924	-				+1.9
4,427,924	-				-0.1
4,427,924	-				-0.0
4,428,034	+		PFLU_RS19570	0.10	+1.1
4,428,034	+		PFLU_RS19570	0.10	-1.3
4,428,034	+		PFLU_RS19570	0.10	+0.2
4,428,034	+		PFLU_RS19570	0.10	+0.7
4,428,035	-		PFLU_RS19570	0.10	+0.1
4,428,035	-		PFLU_RS19570	0.10	-0.7
4,428,035	-		PFLU_RS19570	0.10	+0.5
4,428,035	-		PFLU_RS19570	0.10	+0.5
4,428,035	-		PFLU_RS19570	0.10	+2.2
4,428,035	-		PFLU_RS19570	0.10	+2.4
4,428,035	-		PFLU_RS19570	0.10	-0.7
4,428,035	-		PFLU_RS19570	0.10	-0.7
4,428,035	-		PFLU_RS19570	0.10	+1.8
4,428,035	-		PFLU_RS19570	0.10	-3.0
4,428,035	-		PFLU_RS19570	0.10	+1.6
4,428,035	-		PFLU_RS19570	0.10	-0.9
4,428,035	-		PFLU_RS19570	0.10	+1.3
4,428,035	-		PFLU_RS19570	0.10	+0.5
4,428,035	-		PFLU_RS19570	0.10	+0.3
4,428,035	-		PFLU_RS19570	0.10	-0.5
4,428,035	-		PFLU_RS19570	0.10	-1.4
4,428,035	-		PFLU_RS19570	0.10	+0.7
4,428,169	-		PFLU_RS19570	0.30	-0.1
4,428,547	+		PFLU_RS19570	0.85	+0.0
4,428,547	+		PFLU_RS19570	0.85	+0.7
4,428,548	-		PFLU_RS19570	0.85	-0.2
4,428,548	-		PFLU_RS19570	0.85	-0.0
4,428,551	+		PFLU_RS19570	0.86	-0.3
4,428,551	+		PFLU_RS19570	0.86	-0.0
4,428,551	+		PFLU_RS19570	0.86	-0.4
4,428,552	-		PFLU_RS19570	0.86	-1.7
4,428,589	+				-0.5
4,428,589	+				-2.6
4,428,589	+				-1.0
4,428,589	+				+0.3
4,428,589	+				+0.1
4,428,589	+				-0.7
4,428,589	+				+0.5
4,428,589	+				+0.9
4,428,589	+				-0.1
4,428,589	+				-0.6
4,428,589	+				-3.1
4,428,589	+				-1.0
4,428,589	+				-1.9
4,428,589	+				-1.3
4,428,589	+				+1.5
4,428,589	+				-0.1
4,428,589	+				-0.7
4,428,590	-				+2.1
4,428,590	-				+0.4
4,428,590	-				+0.5
4,428,590	-				+0.4
4,428,590	-				-0.6
4,428,590	-				+1.3
4,428,590	-				+1.0
4,428,590	-				-0.1
4,428,590	-				+1.1
4,428,590	-				+0.6
4,428,590	-				-1.8
4,428,590	-				-0.5
4,428,590	-				-2.3
4,428,590	-				+0.7
4,428,590	-				+0.1
4,428,590	-				+0.9
4,428,590	-				+0.5
4,428,590	-				+0.2
4,428,590	-				+0.3
4,428,590	-				-2.5
4,428,590	-				+0.3
4,428,590	-				+1.3
4,428,590	-				+0.1
4,428,590	-				+0.2
4,428,651	+				-0.1
4,428,679	+				+2.9
4,428,679	+				-0.0
4,428,680	-				-0.1
4,428,680	-				-0.1
4,428,680	-				+0.5