Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18165

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
4,121,598	+				+0.6
4,121,598	+				-0.4
4,121,599	-				+0.5
4,121,599	-				-0.3
4,121,622	-				-2.4
4,121,622	-				-1.1
4,121,683	+				-0.1
4,121,683	+				+1.1
4,121,683	+				-0.7
4,121,683	+				-0.7
4,121,683	+				+0.3
4,121,684	-				-0.4
4,121,684	-				-2.4
4,121,684	-				-1.2
4,121,725	-				-0.3
4,121,818	+		PFLU_RS18160	0.20	+0.0
4,121,818	+		PFLU_RS18160	0.20	-1.7
4,121,818	+		PFLU_RS18160	0.20	+0.7
4,121,818	+		PFLU_RS18160	0.20	-1.1
4,121,819	-		PFLU_RS18160	0.20	-1.5
4,121,819	-		PFLU_RS18160	0.20	-2.0
4,121,819	-		PFLU_RS18160	0.20	-2.4
4,121,819	-		PFLU_RS18160	0.20	-1.7
4,121,819	-		PFLU_RS18160	0.20	-0.1
4,121,840	-		PFLU_RS18160	0.22	-0.9
4,121,867	-		PFLU_RS18160	0.25	-1.5
4,121,867	-		PFLU_RS18160	0.25	-0.4
4,122,056	-		PFLU_RS18160	0.45	-1.4
4,122,093	+		PFLU_RS18160	0.49	-3.2
4,122,093	+		PFLU_RS18160	0.49	+0.9
4,122,093	+		PFLU_RS18160	0.49	-0.7
4,122,093	+		PFLU_RS18160	0.49	-3.0
4,122,094	-		PFLU_RS18160	0.49	-1.7
4,122,094	-		PFLU_RS18160	0.49	-1.8
4,122,094	-		PFLU_RS18160	0.49	-1.4
4,122,094	-		PFLU_RS18160	0.49	-0.1
4,122,094	-		PFLU_RS18160	0.49	-1.1
4,122,120	+		PFLU_RS18160	0.52	+0.6
4,122,120	+		PFLU_RS18160	0.52	+0.2
4,122,121	-		PFLU_RS18160	0.52	-0.7
4,122,121	-		PFLU_RS18160	0.52	-2.6
4,122,121	-		PFLU_RS18160	0.52	-2.4
4,122,199	+		PFLU_RS18160	0.60	-2.7
4,122,200	-		PFLU_RS18160	0.60	-2.1
4,122,200	-		PFLU_RS18160	0.60	-1.1
4,122,200	-		PFLU_RS18160	0.60	-2.2
4,122,237	+		PFLU_RS18160	0.64	-1.3
4,122,285	+		PFLU_RS18160	0.70	-1.5
4,122,286	-		PFLU_RS18160	0.70	-0.7
4,122,886	+		PFLU_RS18165	0.39	+0.9
4,122,886	+		PFLU_RS18165	0.39	-0.1
4,122,887	-		PFLU_RS18165	0.39	-0.1
4,122,887	-		PFLU_RS18165	0.39	-3.1
4,122,955	+		PFLU_RS18165	0.47	-2.8
4,122,955	+		PFLU_RS18165	0.47	-1.7
4,122,955	+		PFLU_RS18165	0.47	-0.7
4,122,955	+		PFLU_RS18165	0.47	-1.1
4,122,955	+		PFLU_RS18165	0.47	+2.5
4,122,955	+		PFLU_RS18165	0.47	+0.4
4,122,955	+		PFLU_RS18165	0.47	-0.4
4,122,955	+		PFLU_RS18165	0.47	-0.7
4,122,955	+		PFLU_RS18165	0.47	-2.5
4,122,955	+		PFLU_RS18165	0.47	+0.7
4,122,956	-		PFLU_RS18165	0.48	-2.4
4,122,956	-		PFLU_RS18165	0.48	-0.2
4,122,956	-		PFLU_RS18165	0.48	-0.9
4,122,956	-		PFLU_RS18165	0.48	-3.2
4,122,956	-		PFLU_RS18165	0.48	-1.3
4,122,956	-		PFLU_RS18165	0.48	-1.1
4,122,956	-		PFLU_RS18165	0.48	-2.2
4,122,956	-		PFLU_RS18165	0.48	-0.9
4,123,105	+		PFLU_RS18165	0.65	+1.9
4,123,105	+		PFLU_RS18165	0.65	-0.7
4,123,105	+		PFLU_RS18165	0.65	+1.0
4,123,105	+		PFLU_RS18165	0.65	+2.2
4,123,105	+		PFLU_RS18165	0.65	-0.8
4,123,106	-		PFLU_RS18165	0.65	-0.6
4,123,106	-		PFLU_RS18165	0.65	-1.2
4,123,106	-		PFLU_RS18165	0.65	-3.0
4,123,106	-		PFLU_RS18165	0.65	-1.9
4,123,133	-		PFLU_RS18165	0.69	-0.7
4,123,156	+		PFLU_RS18165	0.71	-1.3
4,123,156	+		PFLU_RS18165	0.71	-2.0
4,123,156	+		PFLU_RS18165	0.71	-1.4
4,123,156	+		PFLU_RS18165	0.71	-1.4
4,123,156	+		PFLU_RS18165	0.71	-0.3
4,123,157	-		PFLU_RS18165	0.72	+0.1
4,123,157	-		PFLU_RS18165	0.72	+0.9
4,123,157	-		PFLU_RS18165	0.72	+0.3
4,123,190	+		PFLU_RS18165	0.76	+1.2
4,123,192	+		PFLU_RS18165	0.76	-1.4
4,123,192	+		PFLU_RS18165	0.76	+1.3
4,123,192	+		PFLU_RS18165	0.76	-2.8
4,123,192	+		PFLU_RS18165	0.76	-0.2
4,123,192	+		PFLU_RS18165	0.76	+0.2
4,123,192	+		PFLU_RS18165	0.76	-1.7
4,123,192	+		PFLU_RS18165	0.76	-1.8
4,123,192	+		PFLU_RS18165	0.76	+1.2
4,123,192	+		PFLU_RS18165	0.76	-2.2
4,123,192	+		PFLU_RS18165	0.76	-2.7
4,123,192	+		PFLU_RS18165	0.76	-0.4
4,123,192	+		PFLU_RS18165	0.76	+0.7
4,123,192	+		PFLU_RS18165	0.76	-0.7
4,123,192	+		PFLU_RS18165	0.76	-1.2
4,123,192	+		PFLU_RS18165	0.76	-1.4
4,123,192	+		PFLU_RS18165	0.76	-0.1
4,123,192	+		PFLU_RS18165	0.76	-0.1
4,123,192	+		PFLU_RS18165	0.76	+0.2
4,123,192	+		PFLU_RS18165	0.76	-1.2
4,123,192	+		PFLU_RS18165	0.76	-0.7
4,123,192	+		PFLU_RS18165	0.76	-1.4
4,123,192	+		PFLU_RS18165	0.76	+1.4
4,123,192	+		PFLU_RS18165	0.76	-1.5
4,123,192	+		PFLU_RS18165	0.76	-1.4
4,123,192	+		PFLU_RS18165	0.76	-2.1
4,123,192	+		PFLU_RS18165	0.76	+0.7
4,123,192	+		PFLU_RS18165	0.76	+0.1
4,123,193	-		PFLU_RS18165	0.76	-0.8
4,123,193	-		PFLU_RS18165	0.76	-1.1
4,123,193	-		PFLU_RS18165	0.76	-1.1
4,123,193	-		PFLU_RS18165	0.76	+0.2
4,123,193	-		PFLU_RS18165	0.76	-2.4
4,123,193	-		PFLU_RS18165	0.76	-1.5
4,123,193	-		PFLU_RS18165	0.76	-2.4
4,123,193	-		PFLU_RS18165	0.76	-0.4
4,123,193	-		PFLU_RS18165	0.76	-1.7
4,123,193	-		PFLU_RS18165	0.76	-3.7
4,123,193	-		PFLU_RS18165	0.76	-0.9
4,123,193	-		PFLU_RS18165	0.76	-2.2
4,123,193	-		PFLU_RS18165	0.76	-1.2
4,123,193	-		PFLU_RS18165	0.76	-2.9
4,123,193	-		PFLU_RS18165	0.76	-1.7
4,123,193	-		PFLU_RS18165	0.76	-0.7
4,123,193	-		PFLU_RS18165	0.76	+1.5
4,123,193	-		PFLU_RS18165	0.76	-1.0
4,123,193	-		PFLU_RS18165	0.76	-2.2
4,123,196	+		PFLU_RS18165	0.76	-0.7
4,123,217	+		PFLU_RS18165	0.79	-1.9
4,123,218	-		PFLU_RS18165	0.79	-0.4
4,123,378	+				+0.5
4,123,476	+				+0.4
4,123,538	-				+1.3
4,123,550	+				+0.4
4,123,550	+				+1.2
4,123,551	-				-1.4
4,123,588	-				-1.1
4,123,591	+				+1.2
4,123,591	+				+0.7
4,123,592	-				-0.5
4,123,592	-				-1.1
4,123,627	+				+0.8
4,123,647	+				+0.9
4,123,772	+				-0.1
4,123,772	+				-1.3
4,123,772	+				+0.2
4,123,773	-				-2.8
4,123,773	-				+0.9
4,123,773	-				-0.5
4,124,059	-		PFLU_RS18170	0.30	-0.2
4,124,152	-		PFLU_RS18170	0.39	+0.2
4,124,152	-		PFLU_RS18170	0.39	-1.4
4,124,152	-		PFLU_RS18170	0.39	-0.7
4,124,182	+		PFLU_RS18170	0.42	+0.9
4,124,379	+		PFLU_RS18170	0.62	-1.2
4,124,379	+		PFLU_RS18170	0.62	-0.3
4,124,379	+		PFLU_RS18170	0.62	+0.9
4,124,380	-		PFLU_RS18170	0.62	-0.7
4,124,380	-		PFLU_RS18170	0.62	+0.3
4,124,380	-		PFLU_RS18170	0.62	-0.0
4,124,380	-		PFLU_RS18170	0.62	-0.3
4,124,380	-		PFLU_RS18170	0.62	+0.1
4,124,380	-		PFLU_RS18170	0.62	-0.3