Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05610

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
1,265,096	+		PFLU_RS05605	0.69	-1.0
1,265,096	+		PFLU_RS05605	0.69	+0.5
1,265,097	-		PFLU_RS05605	0.69	-2.5
1,265,097	-		PFLU_RS05605	0.69	-0.4
1,265,097	-		PFLU_RS05605	0.69	-1.5
1,265,097	-		PFLU_RS05605	0.69	-0.4
1,265,097	-		PFLU_RS05605	0.69	-2.9
1,265,097	-		PFLU_RS05605	0.69	-0.8
1,265,097	-		PFLU_RS05605	0.69	-2.2
1,265,097	-		PFLU_RS05605	0.69	-2.1
1,265,173	-		PFLU_RS05605	0.73	-0.3
1,265,245	+		PFLU_RS05605	0.77	+0.2
1,265,291	+		PFLU_RS05605	0.80	-0.4
1,265,292	-		PFLU_RS05605	0.80	-1.4
1,265,336	-		PFLU_RS05605	0.83	-2.1
1,265,404	+		PFLU_RS05605	0.86	-0.4
1,265,404	+		PFLU_RS05605	0.86	+1.4
1,265,404	+		PFLU_RS05605	0.86	-1.6
1,265,461	+		PFLU_RS05605	0.90	-1.1
1,265,461	+		PFLU_RS05605	0.90	-2.3
1,265,461	+		PFLU_RS05605	0.90	-0.2
1,265,462	-		PFLU_RS05605	0.90	-2.7
1,265,462	-		PFLU_RS05605	0.90	-2.0
1,265,462	-		PFLU_RS05605	0.90	-1.4
1,265,523	-				-2.1
1,265,523	-				-2.1
1,265,523	-				+0.2
1,265,597	+				-0.2
1,265,597	+				-1.6
1,265,597	+				-2.8
1,265,598	-				-3.6
1,265,598	-				-1.3
1,265,598	-				-0.4
1,265,643	-				-2.1
1,265,880	+		PFLU_RS05610	0.18	-0.8
1,265,881	-		PFLU_RS05610	0.18	-2.7
1,265,881	-		PFLU_RS05610	0.18	-2.0
1,265,926	-		PFLU_RS05610	0.21	-1.2
1,265,926	-		PFLU_RS05610	0.21	-1.6
1,265,931	+		PFLU_RS05610	0.21	-0.2
1,265,931	+		PFLU_RS05610	0.21	-0.4
1,265,931	+		PFLU_RS05610	0.21	-0.6
1,265,931	+		PFLU_RS05610	0.21	-2.0
1,265,931	+		PFLU_RS05610	0.21	-1.2
1,265,931	+		PFLU_RS05610	0.21	+0.6
1,265,932	-		PFLU_RS05610	0.21	-1.0
1,265,932	-		PFLU_RS05610	0.21	-0.5
1,266,534	+		PFLU_RS05610	0.64	-1.2
1,266,534	+		PFLU_RS05610	0.64	-0.8
1,266,534	+		PFLU_RS05610	0.64	-0.0
1,266,534	+		PFLU_RS05610	0.64	-2.1
1,266,535	-		PFLU_RS05610	0.64	-1.2
1,266,535	-		PFLU_RS05610	0.64	-2.5
1,266,535	-		PFLU_RS05610	0.64	-0.8
1,266,535	-		PFLU_RS05610	0.64	-1.6
1,266,535	-		PFLU_RS05610	0.64	+0.4
1,266,535	-		PFLU_RS05610	0.64	-0.4
1,266,537	+		PFLU_RS05610	0.65	-3.0
1,266,538	-		PFLU_RS05610	0.65	-0.2
1,266,650	+		PFLU_RS05610	0.73	-2.2
1,266,650	+		PFLU_RS05610	0.73	-0.8
1,266,650	+		PFLU_RS05610	0.73	-2.6
1,266,651	-		PFLU_RS05610	0.73	-1.3
1,266,651	-		PFLU_RS05610	0.73	-1.8
1,266,651	-		PFLU_RS05610	0.73	-2.1
1,266,651	-		PFLU_RS05610	0.73	-1.0
1,266,694	-		PFLU_RS05610	0.76	-0.3
1,266,792	+		PFLU_RS05610	0.83	-1.0
1,266,792	+		PFLU_RS05610	0.83	-0.0
1,266,793	-		PFLU_RS05610	0.83	-1.5
1,266,793	-		PFLU_RS05610	0.83	+1.2
1,266,900	+				-1.6
1,266,900	+				+0.2
1,266,900	+				-2.3
1,266,900	+				-1.4
1,266,900	+				-0.2
1,266,900	+				-3.0
1,266,900	+				-1.7
1,266,900	+				-0.6
1,266,900	+				-1.4
1,266,900	+				-0.9
1,266,901	-				-0.2
1,266,901	-				-2.4
1,266,901	-				-3.3
1,266,901	-				-0.0
1,266,901	-				-1.3
1,266,901	-				+2.0
1,266,901	-				-1.1
1,266,901	-				-0.0
1,266,901	-				-3.2
1,266,901	-				-1.8
1,266,901	-				-0.8
1,266,901	-				-1.0
1,266,902	+				-2.3
1,266,903	-				-2.7
1,267,021	+				-1.2
1,267,021	+				-0.4
1,267,021	+				-1.4
1,267,034	+				-1.1
1,267,035	-				+0.8
1,267,035	-				-0.6
1,267,035	-				+0.4
1,267,035	-				-1.2
1,267,035	-				+1.1
1,267,035	-				+0.1
1,267,086	+				+1.9
1,267,086	+				-0.4
1,267,086	+				+1.6
1,267,114	-				+2.6
1,267,114	-				-1.2
1,267,114	-				+0.8
1,267,114	-				-0.6
1,267,271	+		PFLU_RS05615	0.32	+1.3
1,267,271	+		PFLU_RS05615	0.32	+1.2
1,267,271	+		PFLU_RS05615	0.32	+1.1
1,267,271	+		PFLU_RS05615	0.32	+2.1
1,267,271	+		PFLU_RS05615	0.32	-0.2
1,267,271	+		PFLU_RS05615	0.32	-0.0
1,267,271	+		PFLU_RS05615	0.32	+0.1
1,267,271	+		PFLU_RS05615	0.32	-0.3
1,267,271	+		PFLU_RS05615	0.32	-1.6
1,267,271	+		PFLU_RS05615	0.32	-0.2
1,267,271	+		PFLU_RS05615	0.32	-0.6
1,267,271	+		PFLU_RS05615	0.32	+1.0
1,267,271	+		PFLU_RS05615	0.32	+0.1
1,267,271	+		PFLU_RS05615	0.32	+0.2
1,267,271	+		PFLU_RS05615	0.32	+1.6
1,267,271	+		PFLU_RS05615	0.32	+1.0
1,267,271	+		PFLU_RS05615	0.32	-0.6
1,267,271	+		PFLU_RS05615	0.32	-0.6
1,267,271	+		PFLU_RS05615	0.32	+0.2
1,267,271	+		PFLU_RS05615	0.32	+1.2
1,267,271	+		PFLU_RS05615	0.32	+0.2
1,267,271	+		PFLU_RS05615	0.32	-0.2
1,267,271	+		PFLU_RS05615	0.32	+1.6
1,267,271	+		PFLU_RS05615	0.32	+1.0
1,267,271	+		PFLU_RS05615	0.32	+1.9
1,267,271	+		PFLU_RS05615	0.32	-1.2
1,267,272	-		PFLU_RS05615	0.32	-0.3
1,267,272	-		PFLU_RS05615	0.32	-0.5
1,267,272	-		PFLU_RS05615	0.32	-0.4
1,267,272	-		PFLU_RS05615	0.32	-0.7
1,267,272	-		PFLU_RS05615	0.32	+0.4
1,267,272	-		PFLU_RS05615	0.32	+0.2
1,267,272	-		PFLU_RS05615	0.32	-0.8
1,267,272	-		PFLU_RS05615	0.32	-1.0
1,267,272	-		PFLU_RS05615	0.32	-0.8
1,267,272	-		PFLU_RS05615	0.32	-1.0
1,267,272	-		PFLU_RS05615	0.32	+0.6
1,267,272	-		PFLU_RS05615	0.32	-0.4
1,267,272	-		PFLU_RS05615	0.32	+0.6
1,267,272	-		PFLU_RS05615	0.32	-2.5
1,267,272	-		PFLU_RS05615	0.32	-0.0
1,267,272	-		PFLU_RS05615	0.32	+0.6
1,267,272	-		PFLU_RS05615	0.32	-0.3
1,267,272	-		PFLU_RS05615	0.32	+1.6
1,267,272	-		PFLU_RS05615	0.32	+0.4
1,267,272	-		PFLU_RS05615	0.32	-0.4
1,267,272	-		PFLU_RS05615	0.32	-0.2
1,267,272	-		PFLU_RS05615	0.32	-0.2
1,267,272	-		PFLU_RS05615	0.32	-0.8
1,267,272	-		PFLU_RS05615	0.32	+0.3
1,267,272	-		PFLU_RS05615	0.32	+0.7
1,267,272	-		PFLU_RS05615	0.32	-0.6
1,267,272	-		PFLU_RS05615	0.32	+2.2
1,267,286	+		PFLU_RS05615	0.37	+0.9
1,267,295	+		PFLU_RS05615	0.39	-0.0
1,267,295	+		PFLU_RS05615	0.39	-0.8
1,267,295	+		PFLU_RS05615	0.39	-0.3
1,267,296	-		PFLU_RS05615	0.40	+1.4
1,267,370	+		PFLU_RS05615	0.61	-1.6
1,267,370	+		PFLU_RS05615	0.61	-0.3
1,267,370	+		PFLU_RS05615	0.61	-1.8
1,267,370	+		PFLU_RS05615	0.61	-1.6
1,267,370	+		PFLU_RS05615	0.61	-1.8
1,267,370	+		PFLU_RS05615	0.61	+0.7
1,267,371	-		PFLU_RS05615	0.62	-1.0
1,267,371	-		PFLU_RS05615	0.62	+0.3
1,267,371	-		PFLU_RS05615	0.62	-0.2
1,267,371	-		PFLU_RS05615	0.62	-1.6
1,267,371	-		PFLU_RS05615	0.62	+0.2
1,267,421	+		PFLU_RS05615	0.76	-0.3
1,267,421	+		PFLU_RS05615	0.76	+0.7
1,267,421	+		PFLU_RS05615	0.76	+0.4
1,267,421	+		PFLU_RS05615	0.76	-0.7
1,267,422	-		PFLU_RS05615	0.77	+1.3
1,267,422	-		PFLU_RS05615	0.77	-1.0
1,267,422	-		PFLU_RS05615	0.77	+1.1
1,267,422	-		PFLU_RS05615	0.77	-0.1
1,267,422	-		PFLU_RS05615	0.77	-1.0
1,267,422	-		PFLU_RS05615	0.77	-1.2
1,267,422	-		PFLU_RS05615	0.77	+0.6
1,267,424	+		PFLU_RS05615	0.77	+1.8
1,267,424	+		PFLU_RS05615	0.77	-0.8
1,267,424	+		PFLU_RS05615	0.77	-0.5
1,267,424	+		PFLU_RS05615	0.77	-2.1
1,267,424	+		PFLU_RS05615	0.77	+0.9
1,267,424	+		PFLU_RS05615	0.77	-0.3
1,267,424	+		PFLU_RS05615	0.77	-0.2
1,267,424	+		PFLU_RS05615	0.77	+0.1
1,267,424	+		PFLU_RS05615	0.77	-1.8
1,267,424	+		PFLU_RS05615	0.77	+0.6
1,267,424	+		PFLU_RS05615	0.77	+0.7
1,267,424	+		PFLU_RS05615	0.77	-0.2
1,267,425	-		PFLU_RS05615	0.78	+0.5
1,267,425	-		PFLU_RS05615	0.78	+0.3
1,267,425	-		PFLU_RS05615	0.78	+1.2
1,267,425	-		PFLU_RS05615	0.78	-0.2
1,267,425	-		PFLU_RS05615	0.78	+0.6
1,267,425	-		PFLU_RS05615	0.78	-1.6
1,267,425	-		PFLU_RS05615	0.78	+1.2
1,267,425	-		PFLU_RS05615	0.78	+0.4
1,267,425	-		PFLU_RS05615	0.78	+0.4
1,267,425	-		PFLU_RS05615	0.78	+2.3
1,267,490	-				+2.2
1,267,517	-				-0.9
1,267,646	+		PFLU_RS05620	0.11	+2.6
1,267,915	+		PFLU_RS05620	0.31	-1.6
1,267,915	+		PFLU_RS05620	0.31	-0.3
1,267,915	+		PFLU_RS05620	0.31	+1.4
1,267,915	+		PFLU_RS05620	0.31	+0.4
1,267,915	+		PFLU_RS05620	0.31	+1.2
1,267,915	+		PFLU_RS05620	0.31	+1.2
1,267,916	-		PFLU_RS05620	0.31	+0.6
1,267,916	-		PFLU_RS05620	0.31	-0.7
1,267,918	+		PFLU_RS05620	0.31	-0.4
1,267,918	+		PFLU_RS05620	0.31	+1.4
1,267,918	+		PFLU_RS05620	0.31	+1.0
1,267,918	+		PFLU_RS05620	0.31	-0.0
1,267,919	-		PFLU_RS05620	0.32	+0.1
1,267,919	-		PFLU_RS05620	0.32	+0.1
1,267,919	-		PFLU_RS05620	0.32	+1.1
1,267,919	-		PFLU_RS05620	0.32	+1.2