Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08590

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,610,379	+		MMP_RS08580	0.65	+1.0
1,610,444	-		MMP_RS08580	0.76	-0.0
1,610,445	+		MMP_RS08580	0.76	-0.1
1,610,553	-				+0.1
1,610,569	-				+0.1
1,610,889	+		MMP_RS08585	0.39	+0.2
1,610,889	+		MMP_RS08585	0.39	+0.3
1,610,889	+		MMP_RS08585	0.39	-0.0
1,610,893	+		MMP_RS08585	0.39	-0.9
1,610,974	-		MMP_RS08585	0.52	+0.4
1,610,975	+		MMP_RS08585	0.52	-0.2
1,610,979	+		MMP_RS08585	0.53	+0.1
1,610,994	+		MMP_RS08585	0.55	+0.3
1,611,003	-		MMP_RS08585	0.56	+0.3
1,611,023	-		MMP_RS08585	0.59	+0.2
1,611,031	-		MMP_RS08585	0.61	+0.1
1,611,078	-		MMP_RS08585	0.68	+0.3
1,611,145	+		MMP_RS08585	0.78	-0.4
1,611,160	+		MMP_RS08585	0.80	-1.2
1,611,233	+				+0.1
1,611,279	-				+0.1
1,611,280	+				+0.3
1,611,284	-				+0.4
1,611,298	+				+0.1
1,611,424	+		MMP_RS08590	0.17	+0.2
1,611,500	-		MMP_RS08590	0.29	+0.1
1,611,541	+		MMP_RS08590	0.35	+0.1
1,611,699	-		MMP_RS08590	0.60	-0.1
1,611,816	+		MMP_RS08590	0.79	+0.4
1,611,818	+		MMP_RS08590	0.79	+0.5
1,611,822	-		MMP_RS08590	0.79	+0.5
1,611,920	-				+0.2
1,611,958	-				+0.1
1,611,962	+				+0.1
1,611,994	+				+0.0
1,612,250	+		MMP_RS08595	0.51	+0.6
1,612,426	-		MMP_RS08595	0.83	-0.5
1,612,854	-		MMP_RS08600	0.35	+0.4
1,612,855	+		MMP_RS08600	0.35	-0.2