Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07790

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,475,991	+				-2.9
1,476,162	+				-2.8
1,476,384	+				-0.3
1,476,447	+		MMP_RS07790	0.12	-0.5
1,476,470	+		MMP_RS07790	0.15	-0.1
1,476,540	+		MMP_RS07790	0.26	-0.4
1,476,551	-		MMP_RS07790	0.27	-0.5
1,476,551	-		MMP_RS07790	0.27	-0.9
1,476,554	+		MMP_RS07790	0.28	-0.5
1,476,597	-		MMP_RS07790	0.34	-1.0
1,476,597	-		MMP_RS07790	0.34	-0.6
1,476,598	+		MMP_RS07790	0.34	-0.4
1,476,765	-		MMP_RS07790	0.59	-0.9
1,476,765	-		MMP_RS07790	0.59	-0.7
1,476,766	+		MMP_RS07790	0.59	-0.2
1,476,927	+		MMP_RS07790	0.84	-0.2
1,476,950	-		MMP_RS07790	0.87	-0.2
1,476,950	-		MMP_RS07790	0.87	-0.1
1,477,148	-		MMP_RS07795	0.15	-0.1
1,477,180	-		MMP_RS07795	0.21	-0.4
1,477,184	-		MMP_RS07795	0.21	-0.8
1,477,208	+		MMP_RS07795	0.25	+0.0
1,477,216	+		MMP_RS07795	0.27	-0.0
1,477,216	+		MMP_RS07795	0.27	-0.2
1,477,227	-		MMP_RS07795	0.29	+0.9
1,477,231	+		MMP_RS07795	0.29	+0.3
1,477,231	+		MMP_RS07795	0.29	-0.1
1,477,342	-		MMP_RS07795	0.48	+0.3
1,477,343	+		MMP_RS07795	0.48	+0.2
1,477,344	-		MMP_RS07795	0.48	+0.1
1,477,344	-		MMP_RS07795	0.48	+0.2
1,477,344	-		MMP_RS07795	0.48	+0.2
1,477,345	+		MMP_RS07795	0.48	+0.3
1,477,345	+		MMP_RS07795	0.48	-0.2
1,477,346	-		MMP_RS07795	0.48	+0.4
1,477,543	-		MMP_RS07795	0.81	+0.0
1,477,574	-		MMP_RS07795	0.86	-0.0
1,477,575	+		MMP_RS07795	0.86	+0.2
1,477,579	-		MMP_RS07795	0.87	+0.0
1,477,579	-		MMP_RS07795	0.87	-0.1
1,477,580	+		MMP_RS07795	0.87	+0.0
1,477,627	-				-0.2
1,477,675	+				+0.1
1,477,714	-				+0.0
1,477,714	-				+0.0
1,477,723	-				-0.0
1,477,724	+				+0.3
1,477,724	+				+0.3
1,477,771	+				+0.3
1,477,786	-				+0.0
1,477,786	-				+0.4
1,477,819	-				+0.0
1,477,823	+				-0.1