Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07380

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,404,887	+				-0.0
1,404,957	+				-2.4
1,405,255	-				-1.7
1,405,646	+				-1.3
1,405,673	+				-0.9
1,405,720	+				+0.3
1,405,771	-		MMP_RS07380	0.12	-0.9
1,405,790	-		MMP_RS07380	0.16	-0.9
1,405,831	-		MMP_RS07380	0.26	-1.3
1,405,958	-		MMP_RS07380	0.54	-2.2
1,405,970	-		MMP_RS07380	0.57	-0.6
1,406,194	-				-1.6
1,406,219	+				-2.2
1,406,241	+				-0.7
1,406,245	-				-0.1
1,406,245	-				-1.0
1,406,246	+				-2.4
1,406,247	-				-0.9
1,406,248	+				-2.3
1,406,248	+				-1.4
1,406,249	-				+0.3
1,406,249	-				-0.4
1,406,249	-				+1.2
1,406,249	-				-0.4
1,406,249	-				-0.7
1,406,249	-				-0.3
1,406,249	-				-1.3
1,406,249	-				-2.7
1,406,250	+				+0.6
1,406,250	+				-0.4
1,406,250	+				-0.2
1,406,250	+				-1.4
1,406,250	+				+0.2
1,406,250	+				-0.3
1,406,250	+				-0.6
1,406,250	+				-0.3
1,406,251	-				-0.3
1,406,252	+				-0.9
1,406,252	+				-0.4
1,406,319	-		MMP_RS07385	0.10	+0.6
1,406,366	-		MMP_RS07385	0.30	-1.7
1,406,369	+		MMP_RS07385	0.31	-0.9
1,406,401	+		MMP_RS07385	0.45	+1.0
1,406,401	+		MMP_RS07385	0.45	-2.5
1,406,443	-		MMP_RS07385	0.62	-0.7
1,406,578	-				-0.5
1,406,586	+				-0.9
1,406,720	-		MMP_RS07390	0.14	-1.9
1,406,975	-		MMP_RS07390	0.38	+0.1
1,407,088	-		MMP_RS07390	0.48	-1.5