Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07185

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,375,299	-		MMP_RS07180	0.73	+1.0
1,375,299	-		MMP_RS07180	0.73	+0.1
1,375,300	+		MMP_RS07180	0.74	+0.4
1,375,454	+		MMP_RS07180	0.80	-0.9
1,375,565	-		MMP_RS07180	0.85	+0.6
1,375,676	+				-0.3
1,375,689	+				-0.1
1,375,802	-				-0.7
1,375,852	-				+0.2
1,375,889	-				+0.3
1,375,890	+				+0.2
1,375,890	+				-0.3
1,375,946	-				-0.0
1,375,962	+				+0.2
1,375,965	-				+0.1
1,375,966	+				+0.6
1,375,969	-				+0.6
1,376,007	+				+0.2
1,376,013	+				+0.3
1,376,013	+				-0.2
1,376,016	-				+0.7
1,376,221	+		MMP_RS07185	0.13	-0.2
1,376,222	-		MMP_RS07185	0.13	-0.4
1,376,233	-		MMP_RS07185	0.14	+0.3
1,376,234	+		MMP_RS07185	0.14	+0.4
1,376,234	+		MMP_RS07185	0.14	+0.4
1,376,234	+		MMP_RS07185	0.14	+0.2
1,376,284	-		MMP_RS07185	0.18	+0.1
1,376,331	+		MMP_RS07185	0.21	-0.1
1,376,336	-		MMP_RS07185	0.22	-0.9
1,376,337	+		MMP_RS07185	0.22	+1.2
1,376,346	-		MMP_RS07185	0.22	-0.6
1,376,347	+		MMP_RS07185	0.22	+0.2
1,376,347	+		MMP_RS07185	0.22	+0.4
1,376,375	-		MMP_RS07185	0.25	+0.5
1,376,404	+		MMP_RS07185	0.27	-0.3
1,376,404	+		MMP_RS07185	0.27	+1.1
1,376,428	+		MMP_RS07185	0.29	+0.5
1,376,451	-		MMP_RS07185	0.30	+0.4
1,376,460	-		MMP_RS07185	0.31	-0.1
1,376,477	-		MMP_RS07185	0.32	+1.0
1,376,553	-		MMP_RS07185	0.38	+0.6
1,376,670	+		MMP_RS07185	0.47	+0.2
1,376,682	+		MMP_RS07185	0.48	+0.2
1,376,685	-		MMP_RS07185	0.48	-0.3
1,376,685	-		MMP_RS07185	0.48	+0.5
1,376,686	+		MMP_RS07185	0.48	+0.9
1,376,686	+		MMP_RS07185	0.48	-0.4
1,376,706	-		MMP_RS07185	0.50	+0.8
1,376,707	+		MMP_RS07185	0.50	-0.1
1,376,722	+		MMP_RS07185	0.51	+0.5
1,376,724	+		MMP_RS07185	0.51	+0.3
1,376,724	+		MMP_RS07185	0.51	-0.4
1,377,393	+				+0.3
1,377,581	+				+0.7
1,377,590	-				-0.1
1,377,611	+				+0.2
1,377,624	-				-0.1
1,377,651	-				+0.6
1,377,652	+				+0.2
1,377,652	+				+0.9
1,377,654	-				+0.1
1,377,655	+				+0.9
1,377,655	+				-0.0
1,377,656	-				-0.2
1,377,733	+				+0.3
1,377,866	-				-0.6
1,377,867	+				+1.1
1,377,931	+				-0.4
1,378,017	-				-0.2
1,378,113	+		MMP_RS07190	0.11	-0.8