Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07125

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,362,853	+		MMP_RS07120	0.31	+0.3
1,362,904	+		MMP_RS07120	0.35	+0.7
1,363,039	+		MMP_RS07120	0.46	+0.5
1,363,111	+		MMP_RS07120	0.51	+0.3
1,363,111	+		MMP_RS07120	0.51	+1.0
1,363,115	-		MMP_RS07120	0.52	+0.5
1,363,116	+		MMP_RS07120	0.52	-0.1
1,363,193	-		MMP_RS07120	0.58	+1.2
1,363,247	-		MMP_RS07120	0.62	+0.6
1,363,248	+		MMP_RS07120	0.62	+0.4
1,363,399	+		MMP_RS07120	0.75	+0.4
1,363,535	-		MMP_RS07120	0.86	+0.4
1,363,617	-				+0.4
1,363,638	-				+0.0
1,363,638	-				+0.1
1,363,824	+				+0.4
1,363,899	-		MMP_RS07125	0.16	+0.4
1,363,971	-		MMP_RS07125	0.29	+0.6
1,364,098	-		MMP_RS07125	0.54	+0.4
1,364,176	+		MMP_RS07125	0.68	+0.6
1,364,308	+				+0.7
1,364,381	-				+1.2
1,364,508	+		MMP_RS07130	0.22	+1.0
1,364,513	-		MMP_RS07130	0.23	+0.2
1,364,594	-		MMP_RS07130	0.35	+1.2
1,364,598	+		MMP_RS07130	0.35	+0.6
1,364,631	-		MMP_RS07130	0.40	+0.1
1,364,753	-		MMP_RS07130	0.58	+0.5
1,364,754	+		MMP_RS07130	0.58	+0.1
1,364,798	-		MMP_RS07130	0.64	+0.4
1,364,798	-		MMP_RS07130	0.64	+0.6
1,364,807	+		MMP_RS07130	0.66	+0.2
1,364,928	+		MMP_RS07130	0.83	+0.9
1,364,928	+		MMP_RS07130	0.83	+0.3
1,364,932	+		MMP_RS07130	0.84	+0.3
1,365,035	-				-0.5
1,365,040	-				+0.2
1,365,040	-				+0.6
1,365,040	-				+0.2
1,365,098	-				+0.2
1,365,188	-		MMP_RS07135	0.13	+0.5
1,365,262	+		MMP_RS07135	0.22	+0.8
1,365,304	+		MMP_RS07135	0.27	+0.9