Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06140

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,173,262	-				-3.6
1,173,397	-				-0.8
1,173,920	-				-2.1
1,173,967	-				-1.2
1,174,096	-				-0.3
1,174,128	-				+0.7
1,174,139	+				-0.1
1,174,145	-				+0.2
1,174,149	-				+0.1
1,174,152	+				-0.2
1,174,156	+				+0.2
1,174,157	-				+0.1
1,174,157	-				+0.2
1,174,178	-				+0.6
1,174,178	-				-0.3
1,174,327	+				-0.1
1,174,329	+				+0.1
1,174,358	-				-0.0
1,174,526	-		MMP_RS06140	0.25	+0.0
1,174,794	-		MMP_RS06140	0.49	-0.3
1,174,906	-		MMP_RS06140	0.59	+0.2
1,174,907	+		MMP_RS06140	0.59	+2.2
1,174,949	+		MMP_RS06140	0.63	+0.3
1,175,091	-		MMP_RS06140	0.75	-0.1
1,175,271	+				+0.1
1,175,819	-				+0.3
1,175,916	+				-0.4
1,176,022	-				+0.5
1,176,023	+				+0.1
1,176,071	-				-0.2
1,176,074	-				+0.2
1,176,075	+				+0.9
1,176,118	-				+0.7
1,176,131	-				-0.1
1,176,132	+				+0.3
1,176,146	-				-0.2
1,176,165	+				+0.2
1,176,167	-				+0.4
1,176,167	-				-0.1
1,176,234	-				-0.5
1,176,234	-				-0.1
1,176,235	+				-0.6
1,176,265	-				-0.0
1,176,265	-				+0.4
1,176,266	+				-0.1
1,176,276	-				-0.1
1,176,277	+				+0.1