Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05635

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,081,631	+				-1.2
1,081,663	-				-0.1
1,081,865	+				+0.1
1,081,895	+				-0.8
1,081,921	+				+1.8
1,081,958	-				+0.8
1,081,990	-				+0.0
1,082,085	+				-2.4
1,082,155	-				+0.9
1,082,160	+				+0.3
1,082,281	-				-0.2
1,082,331	-				+0.1
1,082,349	-				-1.2
1,082,427	+				+0.6
1,082,495	-				+0.7
1,082,534	-				-0.9
1,082,545	+				+1.1
1,082,590	+				+0.2
1,082,595	-				+0.5
1,082,785	+		MMP_RS05635	0.29	+0.7
1,082,859	-		MMP_RS05635	0.37	-0.8
1,082,948	-		MMP_RS05635	0.47	+0.5
1,082,948	-		MMP_RS05635	0.47	+0.3
1,082,948	-		MMP_RS05635	0.47	-0.1
1,082,956	+		MMP_RS05635	0.48	+0.0
1,082,972	-		MMP_RS05635	0.50	+1.1
1,082,972	-		MMP_RS05635	0.50	+0.7
1,083,024	-		MMP_RS05635	0.56	+0.6
1,083,088	-		MMP_RS05635	0.63	+0.2
1,083,108	+		MMP_RS05635	0.65	+0.3
1,083,217	-		MMP_RS05635	0.78	+0.2
1,083,309	-		MMP_RS05635	0.88	+1.1
1,083,314	+		MMP_RS05635	0.89	+0.6
1,083,352	-				+0.1
1,083,357	-				-0.0
1,083,358	+				+0.4
1,083,358	+				+0.4
1,083,397	-				+0.5
1,083,431	-				+0.4
1,083,431	-				+0.6
1,083,435	+				+0.5
1,083,435	+				+0.3
1,083,438	-				+1.5
1,083,438	-				-0.0
1,083,439	+				+1.3
1,083,439	+				+0.2
1,083,458	-				+0.1
1,083,458	-				+0.2
1,083,458	-				-0.1
1,083,459	+				+0.5
1,083,459	+				+0.6
1,083,469	-				-0.0
1,083,469	-				+0.1
1,083,472	+				+0.1
1,083,472	+				-0.3
1,083,472	+				-0.0
1,083,489	+				+0.0
1,083,489	+				+0.3
1,083,490	-				+0.2
1,083,490	-				+0.4
1,083,490	-				+0.1
1,083,491	+				+0.3
1,083,491	+				+0.6
1,083,491	+				+0.1
1,083,491	+				+0.5
1,083,497	-				+0.4
1,083,497	-				+0.2
1,083,532	-				-0.1
1,083,561	-				-0.5
1,083,623	+		MMP_RS05640	0.10	+1.1
1,083,708	+		MMP_RS05640	0.20	-0.1
1,083,773	-		MMP_RS05640	0.28	+0.4
1,083,774	+		MMP_RS05640	0.28	+1.1
1,083,778	+		MMP_RS05640	0.29	+0.6
1,083,816	+		MMP_RS05640	0.33	-0.7
1,083,816	+		MMP_RS05640	0.33	-0.4
1,083,892	-		MMP_RS05640	0.42	+1.1
1,084,008	+		MMP_RS05640	0.56	-0.1
1,084,087	-		MMP_RS05640	0.65	+0.6
1,084,088	+		MMP_RS05640	0.65	+1.6
1,084,089	-		MMP_RS05640	0.65	+0.8
1,084,092	-		MMP_RS05640	0.65	+0.2
1,084,222	-		MMP_RS05640	0.81	-0.0
1,084,235	+		MMP_RS05640	0.82	+0.0
1,084,268	-		MMP_RS05640	0.86	+0.5
1,084,269	+		MMP_RS05640	0.86	+0.7
1,084,272	-		MMP_RS05640	0.87	+1.1
1,084,273	+		MMP_RS05640	0.87	-0.8
1,084,278	+		MMP_RS05640	0.87	-0.0
1,084,389	-				-0.1
1,084,405	-				-0.2
1,084,405	-				+0.7
1,084,411	+				-0.1