Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05095

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
968,710	-		MMP_RS05090	0.42	-1.4
968,901	-		MMP_RS05090	0.56	-1.0
968,950	-		MMP_RS05090	0.60	-1.1
968,951	+		MMP_RS05090	0.60	-0.1
968,986	+		MMP_RS05090	0.62	-0.8
969,055	-		MMP_RS05090	0.67	-0.1
969,055	-		MMP_RS05090	0.67	-0.7
969,056	+		MMP_RS05090	0.68	-0.7
969,130	-		MMP_RS05090	0.73	-0.8
969,215	-		MMP_RS05090	0.79	-0.9
969,220	+		MMP_RS05090	0.79	-1.0
969,247	-		MMP_RS05090	0.81	-0.6
969,487	-				-0.5
969,606	-		MMP_RS05095	0.18	-0.4
969,607	+		MMP_RS05095	0.18	-0.3
969,674	+		MMP_RS05095	0.31	-0.7
969,674	+		MMP_RS05095	0.31	-0.3
969,674	+		MMP_RS05095	0.31	-0.6
969,694	+		MMP_RS05095	0.35	-0.3
969,812	+		MMP_RS05095	0.58	-0.6
970,159	+				-0.6
970,171	+				-0.7
970,182	-				-0.6
970,212	-				-0.6
970,212	-				-0.4
970,212	-				+0.1
970,213	+				+0.1
970,213	+				-0.7
970,216	-				-1.0
970,543	+		MMP_RS05100	0.21	-0.6
970,543	+		MMP_RS05100	0.21	-0.4
970,549	-		MMP_RS05100	0.22	-0.5
970,549	-		MMP_RS05100	0.22	-0.3
970,628	-		MMP_RS05100	0.25	+0.3
970,628	-		MMP_RS05100	0.25	-1.0
970,726	-		MMP_RS05100	0.29	-0.4
970,727	+		MMP_RS05100	0.29	-0.9
970,727	+		MMP_RS05100	0.29	-0.6
970,727	+		MMP_RS05100	0.29	-0.9
970,761	-		MMP_RS05100	0.31	+0.4
970,772	+		MMP_RS05100	0.31	-0.7
970,802	-		MMP_RS05100	0.32	-0.7
970,854	-		MMP_RS05100	0.35	-1.2
970,854	-		MMP_RS05100	0.35	-0.4
970,992	-		MMP_RS05100	0.41	-0.5
970,993	+		MMP_RS05100	0.41	-0.4