Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05090

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
967,467	+		MMP_RS05085	0.14	+0.2
967,483	+		MMP_RS05085	0.16	-0.4
967,570	-		MMP_RS05085	0.27	-0.7
967,732	+		MMP_RS05085	0.49	+0.1
967,741	-		MMP_RS05085	0.50	+1.2
967,742	+		MMP_RS05085	0.50	-0.8
967,781	-		MMP_RS05085	0.55	-0.0
967,795	-		MMP_RS05085	0.57	-0.8
967,853	-		MMP_RS05085	0.65	-0.6
967,871	-		MMP_RS05085	0.67	-0.4
967,892	-		MMP_RS05085	0.70	-0.7
967,910	-		MMP_RS05085	0.72	-0.4
967,911	+		MMP_RS05085	0.73	-1.1
968,129	-				-0.6
968,130	+				-0.5
968,297	+		MMP_RS05090	0.12	-0.4
968,482	-		MMP_RS05090	0.26	-0.0
968,710	-		MMP_RS05090	0.42	-1.4
968,901	-		MMP_RS05090	0.56	-1.0
968,950	-		MMP_RS05090	0.60	-1.1
968,951	+		MMP_RS05090	0.60	-0.1
968,986	+		MMP_RS05090	0.62	-0.8
969,055	-		MMP_RS05090	0.67	-0.1
969,055	-		MMP_RS05090	0.67	-0.7
969,056	+		MMP_RS05090	0.68	-0.7
969,130	-		MMP_RS05090	0.73	-0.8
969,215	-		MMP_RS05090	0.79	-0.9
969,220	+		MMP_RS05090	0.79	-1.0
969,247	-		MMP_RS05090	0.81	-0.6
969,487	-				-0.5
969,606	-		MMP_RS05095	0.18	-0.4
969,607	+		MMP_RS05095	0.18	-0.3
969,674	+		MMP_RS05095	0.31	-0.7
969,674	+		MMP_RS05095	0.31	-0.3
969,674	+		MMP_RS05095	0.31	-0.6
969,694	+		MMP_RS05095	0.35	-0.3
969,812	+		MMP_RS05095	0.58	-0.6
970,159	+				-0.6
970,171	+				-0.7
970,182	-				-0.6
970,212	-				-0.6
970,212	-				-0.4
970,212	-				+0.1
970,213	+				+0.1
970,213	+				-0.7
970,216	-				-1.0