Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01655

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
305,380	+		MMP_RS01645	0.37	+0.0
305,542	+		MMP_RS01645	0.60	+0.0
305,625	-		MMP_RS01645	0.72	+0.2
305,630	-		MMP_RS01645	0.73	-0.1
305,773	-				+0.2
305,792	-				-0.5
305,792	-				-0.1
305,884	+				-0.4
306,118	-		MMP_RS01650	0.69	+0.3
306,169	+				+0.4
306,174	-				+0.8
306,210	-				+0.5
306,323	-		MMP_RS01655	0.37	+0.5
306,365	-		MMP_RS01655	0.50	+0.3
306,499	+		MMP_RS01655	0.88	-0.1
306,521	+				+0.1
306,545	-				+0.2
306,558	-				-0.7
306,590	+				-0.0
306,603	-				-0.2
306,617	-				+0.5
306,622	-				+0.4
306,636	-				-0.2
306,636	-				-0.0
306,641	-				-0.5
306,647	+				-0.1
306,663	+				-0.0
306,663	+				-0.5
306,744	-		MMP_RS01660	0.14	+0.2
306,745	+		MMP_RS01660	0.14	+0.0
306,756	+		MMP_RS01660	0.16	+0.0
306,999	+		MMP_RS01660	0.57	+0.1
307,249	-				-0.2
307,263	+				-0.5
307,272	-				-0.4
307,272	-				-0.5
307,273	+				-0.7
307,273	+				+0.1
307,276	-				-0.4
307,276	-				-0.8
307,276	-				-0.7
307,276	-				+0.4
307,276	-				-0.2
307,276	-				-0.9
307,277	+				+0.1
307,277	+				+0.2
307,277	+				-0.2
307,288	-				-1.0
307,288	-				-1.1
307,289	+				-0.1
307,337	+				+0.2
307,351	+		MMP_RS01665	0.13	+0.2
307,355	-		MMP_RS01665	0.14	-0.3
307,363	-		MMP_RS01665	0.16	-1.5
307,363	-		MMP_RS01665	0.16	-0.5
307,450	+		MMP_RS01665	0.39	+0.5