Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27820

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27815 and BWI76_RS27820 are separated by 102 nucleotidesBWI76_RS27820 and BWI76_RS27825 are separated by 26 nucleotidesBWI76_RS27825 and BWI76_RS27830 are separated by 313 nucleotidesBWI76_RS27830 and BWI76_RS27835 are separated by 70 nucleotides BWI76_RS27815: BWI76_RS27815 - acetolactate synthase catalytic subunit, at 5,770,640 to 5,772,328 _RS27815 BWI76_RS27820: BWI76_RS27820 - ilvB operon leader peptide IvbL, at 5,772,431 to 5,772,526 _RS27820 BWI76_RS27825: BWI76_RS27825 - hypothetical protein, at 5,772,553 to 5,772,795 _RS27825 BWI76_RS27830: BWI76_RS27830 - type I toxin-antitoxin system toxin TisB, at 5,773,109 to 5,773,198 _RS27830 BWI76_RS27835: BWI76_RS27835 - acyltransferase, at 5,773,269 to 5,773,715 _RS27835 Position (kb) 5772 5773Strain fitness (log2 ratio) -2 -1 0 1at 5771.608 kb on - strand, within BWI76_RS27815at 5771.655 kb on - strand, within BWI76_RS27815at 5771.683 kb on + strand, within BWI76_RS27815at 5771.691 kb on - strand, within BWI76_RS27815at 5771.700 kb on + strand, within BWI76_RS27815at 5771.746 kb on - strand, within BWI76_RS27815at 5771.791 kb on + strand, within BWI76_RS27815at 5771.846 kb on + strand, within BWI76_RS27815at 5771.873 kb on + strand, within BWI76_RS27815at 5771.881 kb on - strand, within BWI76_RS27815at 5771.882 kb on - strand, within BWI76_RS27815at 5772.058 kb on + strand, within BWI76_RS27815at 5772.077 kb on + strand, within BWI76_RS27815at 5772.092 kb on + strand, within BWI76_RS27815at 5772.125 kb on - strand, within BWI76_RS27815at 5772.248 kb on + strandat 5772.499 kb on + strand, within BWI76_RS27820at 5772.501 kb on + strand, within BWI76_RS27820at 5772.519 kb on + strandat 5772.519 kb on - strandat 5772.721 kb on + strand, within BWI76_RS27825at 5772.729 kb on - strand, within BWI76_RS27825at 5772.729 kb on - strand, within BWI76_RS27825at 5772.795 kb on - strandat 5772.884 kb on - strandat 5773.054 kb on - strandat 5773.068 kb on - strandat 5773.130 kb on + strand, within BWI76_RS27830at 5773.178 kb on + strand, within BWI76_RS27830at 5773.178 kb on + strand, within BWI76_RS27830at 5773.224 kb on - strandat 5773.305 kb on - strandat 5773.445 kb on - strand, within BWI76_RS27835at 5773.488 kb on - strand, within BWI76_RS27835

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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5,771,608 - BWI76_RS27815 0.57 -1.8
5,771,655 - BWI76_RS27815 0.60 +0.6
5,771,683 + BWI76_RS27815 0.62 -0.4
5,771,691 - BWI76_RS27815 0.62 +0.3
5,771,700 + BWI76_RS27815 0.63 -0.8
5,771,746 - BWI76_RS27815 0.65 -1.5
5,771,791 + BWI76_RS27815 0.68 -1.2
5,771,846 + BWI76_RS27815 0.71 -1.5
5,771,873 + BWI76_RS27815 0.73 -0.1
5,771,881 - BWI76_RS27815 0.73 -1.6
5,771,882 - BWI76_RS27815 0.74 -0.8
5,772,058 + BWI76_RS27815 0.84 -0.7
5,772,077 + BWI76_RS27815 0.85 -1.3
5,772,092 + BWI76_RS27815 0.86 -1.3
5,772,125 - BWI76_RS27815 0.88 -0.9
5,772,248 + -0.6
5,772,499 + BWI76_RS27820 0.71 -0.9
5,772,501 + BWI76_RS27820 0.73 -0.6
5,772,519 + -1.0
5,772,519 - -0.3
5,772,721 + BWI76_RS27825 0.69 -0.6
5,772,729 - BWI76_RS27825 0.72 +0.5
5,772,729 - BWI76_RS27825 0.72 +0.1
5,772,795 - +0.4
5,772,884 - +1.4
5,773,054 - -0.2
5,773,068 - +0.7
5,773,130 + BWI76_RS27830 0.23 -1.1
5,773,178 + BWI76_RS27830 0.77 -0.1
5,773,178 + BWI76_RS27830 0.77 -0.3
5,773,224 - +0.1
5,773,305 - -1.1
5,773,445 - BWI76_RS27835 0.39 -0.1
5,773,488 - BWI76_RS27835 0.49 -0.4

Or see this region's nucleotide sequence