Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27815 and BWI76_RS27820 are separated by 102 nucleotides BWI76_RS27820 and BWI76_RS27825 are separated by 26 nucleotides BWI76_RS27825 and BWI76_RS27830 are separated by 313 nucleotides BWI76_RS27830 and BWI76_RS27835 are separated by 70 nucleotides
BWI76_RS27815: BWI76_RS27815 - acetolactate synthase catalytic subunit, at 5,770,640 to 5,772,328
_RS27815
BWI76_RS27820: BWI76_RS27820 - ilvB operon leader peptide IvbL, at 5,772,431 to 5,772,526
_RS27820
BWI76_RS27825: BWI76_RS27825 - hypothetical protein, at 5,772,553 to 5,772,795
_RS27825
BWI76_RS27830: BWI76_RS27830 - type I toxin-antitoxin system toxin TisB, at 5,773,109 to 5,773,198
_RS27830
BWI76_RS27835: BWI76_RS27835 - acyltransferase, at 5,773,269 to 5,773,715
_RS27835
Position (kb) 5772
5773 Strain fitness (log2 ratio) -2
-1
0
1 at 5771.608 kb on - strand, within BWI76_RS27815 at 5771.655 kb on - strand, within BWI76_RS27815 at 5771.683 kb on + strand, within BWI76_RS27815 at 5771.691 kb on - strand, within BWI76_RS27815 at 5771.700 kb on + strand, within BWI76_RS27815 at 5771.746 kb on - strand, within BWI76_RS27815 at 5771.791 kb on + strand, within BWI76_RS27815 at 5771.846 kb on + strand, within BWI76_RS27815 at 5771.873 kb on + strand, within BWI76_RS27815 at 5771.881 kb on - strand, within BWI76_RS27815 at 5771.882 kb on - strand, within BWI76_RS27815 at 5772.058 kb on + strand, within BWI76_RS27815 at 5772.077 kb on + strand, within BWI76_RS27815 at 5772.092 kb on + strand, within BWI76_RS27815 at 5772.125 kb on - strand, within BWI76_RS27815 at 5772.248 kb on + strand at 5772.499 kb on + strand, within BWI76_RS27820 at 5772.501 kb on + strand, within BWI76_RS27820 at 5772.519 kb on + strand at 5772.519 kb on - strand at 5772.721 kb on + strand, within BWI76_RS27825 at 5772.729 kb on - strand, within BWI76_RS27825 at 5772.729 kb on - strand, within BWI76_RS27825 at 5772.795 kb on - strand at 5772.884 kb on - strand at 5773.054 kb on - strand at 5773.068 kb on - strand at 5773.130 kb on + strand, within BWI76_RS27830 at 5773.178 kb on + strand, within BWI76_RS27830 at 5773.178 kb on + strand, within BWI76_RS27830 at 5773.224 kb on - strand at 5773.305 kb on - strand at 5773.445 kb on - strand, within BWI76_RS27835 at 5773.488 kb on - strand, within BWI76_RS27835
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 5,771,608 - BWI76_RS27815 0.57 -1.8 5,771,655 - BWI76_RS27815 0.60 +0.6 5,771,683 + BWI76_RS27815 0.62 -0.4 5,771,691 - BWI76_RS27815 0.62 +0.3 5,771,700 + BWI76_RS27815 0.63 -0.8 5,771,746 - BWI76_RS27815 0.65 -1.5 5,771,791 + BWI76_RS27815 0.68 -1.2 5,771,846 + BWI76_RS27815 0.71 -1.5 5,771,873 + BWI76_RS27815 0.73 -0.1 5,771,881 - BWI76_RS27815 0.73 -1.6 5,771,882 - BWI76_RS27815 0.74 -0.8 5,772,058 + BWI76_RS27815 0.84 -0.7 5,772,077 + BWI76_RS27815 0.85 -1.3 5,772,092 + BWI76_RS27815 0.86 -1.3 5,772,125 - BWI76_RS27815 0.88 -0.9 5,772,248 + -0.6 5,772,499 + BWI76_RS27820 0.71 -0.9 5,772,501 + BWI76_RS27820 0.73 -0.6 5,772,519 + -1.0 5,772,519 - -0.3 5,772,721 + BWI76_RS27825 0.69 -0.6 5,772,729 - BWI76_RS27825 0.72 +0.5 5,772,729 - BWI76_RS27825 0.72 +0.1 5,772,795 - +0.4 5,772,884 - +1.4 5,773,054 - -0.2 5,773,068 - +0.7 5,773,130 + BWI76_RS27830 0.23 -1.1 5,773,178 + BWI76_RS27830 0.77 -0.1 5,773,178 + BWI76_RS27830 0.77 -0.3 5,773,224 - +0.1 5,773,305 - -1.1 5,773,445 - BWI76_RS27835 0.39 -0.1 5,773,488 - BWI76_RS27835 0.49 -0.4
Or see this region's nucleotide sequence