Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23010 and BWI76_RS23015 overlap by 4 nucleotides BWI76_RS23015 and BWI76_RS23020 are separated by 8 nucleotides BWI76_RS23020 and BWI76_RS23025 overlap by 14 nucleotides BWI76_RS23025 and BWI76_RS23030 are separated by 1 nucleotides
BWI76_RS23010: BWI76_RS23010 - cobyric acid synthase CobQ, at 4,800,515 to 4,802,038
_RS23010
BWI76_RS23015: BWI76_RS23015 - cobalt transporter ATP-binding subunit, at 4,802,035 to 4,802,850
_RS23015
BWI76_RS23020: BWI76_RS23020 - cobalamin biosynthesis protein CbiQ, at 4,802,859 to 4,803,536
_RS23020
BWI76_RS23025: BWI76_RS23025 - cobalt ABC transporter substrate-binding protein CbiN, at 4,803,523 to 4,803,804
_RS23025
BWI76_RS23030: BWI76_RS23030 - cobalamin biosynthesis protein CbiM, at 4,803,806 to 4,804,543
_RS23030
Position (kb) 4802
4803 Strain fitness (log2 ratio) -1
0
1
2 at 4801.437 kb on - strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.624 kb on + strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.714 kb on + strand, within BWI76_RS23010 at 4801.839 kb on - strand, within BWI76_RS23010 at 4801.871 kb on + strand, within BWI76_RS23010 at 4802.113 kb on - strand at 4802.288 kb on + strand, within BWI76_RS23015 at 4802.858 kb on - strand at 4802.875 kb on + strand at 4802.875 kb on + strand at 4803.106 kb on + strand, within BWI76_RS23020 at 4803.114 kb on - strand, within BWI76_RS23020 at 4803.392 kb on - strand, within BWI76_RS23020 at 4803.606 kb on - strand, within BWI76_RS23025 at 4803.768 kb on - strand, within BWI76_RS23025
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,801,437 - BWI76_RS23010 0.60 -0.1 4,801,464 + BWI76_RS23010 0.62 -0.5 4,801,464 + BWI76_RS23010 0.62 -0.1 4,801,472 - BWI76_RS23010 0.63 -0.3 4,801,472 - BWI76_RS23010 0.63 -0.9 4,801,472 - BWI76_RS23010 0.63 +0.8 4,801,624 + BWI76_RS23010 0.73 -0.3 4,801,687 - BWI76_RS23010 0.77 -0.1 4,801,687 - BWI76_RS23010 0.77 +0.2 4,801,687 - BWI76_RS23010 0.77 -0.4 4,801,714 + BWI76_RS23010 0.79 -0.0 4,801,839 - BWI76_RS23010 0.87 -0.4 4,801,871 + BWI76_RS23010 0.89 -0.4 4,802,113 - +0.6 4,802,288 + BWI76_RS23015 0.31 +0.6 4,802,858 - -0.4 4,802,875 + -0.6 4,802,875 + +2.4 4,803,106 + BWI76_RS23020 0.36 +0.6 4,803,114 - BWI76_RS23020 0.38 -1.1 4,803,392 - BWI76_RS23020 0.79 +0.0 4,803,606 - BWI76_RS23025 0.29 +0.4 4,803,768 - BWI76_RS23025 0.87 +0.2
Or see this region's nucleotide sequence