Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22920

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22915 and BWI76_RS22920 are separated by 559 nucleotidesBWI76_RS22920 and BWI76_RS22925 are separated by 31 nucleotides BWI76_RS22915: BWI76_RS22915 - L-fuculose phosphate aldolase (EC 4.1.2.17) (from data), at 4,784,123 to 4,784,770 _RS22915 BWI76_RS22920: BWI76_RS22920 - MFS transporter, at 4,785,330 to 4,786,640 _RS22920 BWI76_RS22925: BWI76_RS22925 - L-fucose isomerase, at 4,786,672 to 4,788,447 _RS22925 Position (kb) 4785 4786 4787Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 4784.356 kb on + strand, within BWI76_RS22915at 4784.409 kb on - strand, within BWI76_RS22915at 4784.409 kb on - strand, within BWI76_RS22915at 4784.419 kb on - strand, within BWI76_RS22915at 4784.495 kb on + strand, within BWI76_RS22915at 4784.512 kb on + strandat 4784.558 kb on + strand, within BWI76_RS22915at 4784.605 kb on - strand, within BWI76_RS22915at 4784.605 kb on - strand, within BWI76_RS22915at 4784.624 kb on - strand, within BWI76_RS22915at 4784.641 kb on + strand, within BWI76_RS22915at 4784.651 kb on + strand, within BWI76_RS22915at 4784.664 kb on - strand, within BWI76_RS22915at 4784.664 kb on - strand, within BWI76_RS22915at 4784.670 kb on - strand, within BWI76_RS22915at 4784.684 kb on - strand, within BWI76_RS22915at 4784.684 kb on - strand, within BWI76_RS22915at 4784.691 kb on + strand, within BWI76_RS22915at 4784.699 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.704 kb on - strand, within BWI76_RS22915at 4784.709 kb on - strandat 4784.709 kb on - strandat 4784.709 kb on - strandat 4784.709 kb on - strandat 4784.730 kb on - strandat 4784.730 kb on - strandat 4784.730 kb on - strandat 4784.730 kb on - strandat 4784.732 kb on + strandat 4784.740 kb on - strandat 4784.740 kb on - strandat 4784.740 kb on - strandat 4784.753 kb on - strandat 4784.762 kb on - strandat 4784.762 kb on - strandat 4784.762 kb on - strandat 4784.763 kb on - strandat 4784.763 kb on - strandat 4784.763 kb on - strandat 4784.767 kb on - strandat 4784.794 kb on - strandat 4784.827 kb on - strandat 4784.835 kb on + strandat 4784.835 kb on + strandat 4784.837 kb on + strandat 4784.843 kb on - strandat 4784.866 kb on - strandat 4784.887 kb on - strandat 4784.905 kb on + strandat 4784.905 kb on + strandat 4784.910 kb on + strandat 4784.910 kb on + strandat 4784.913 kb on - strandat 4784.913 kb on - strandat 4785.026 kb on - strandat 4785.149 kb on + strandat 4785.155 kb on + strandat 4785.230 kb on + strandat 4785.236 kb on - strandat 4785.248 kb on - strandat 4785.256 kb on + strandat 4785.265 kb on + strandat 4785.284 kb on + strandat 4785.285 kb on + strandat 4785.285 kb on + strandat 4785.285 kb on + strandat 4785.292 kb on - strandat 4785.293 kb on - strandat 4785.293 kb on - strandat 4785.308 kb on + strandat 4785.308 kb on + strandat 4785.308 kb on + strandat 4785.316 kb on - strandat 4785.316 kb on - strandat 4785.343 kb on - strandat 4785.368 kb on + strandat 4785.386 kb on - strandat 4785.394 kb on + strandat 4785.397 kb on - strandat 4785.397 kb on - strandat 4785.397 kb on - strandat 4785.402 kb on - strandat 4785.404 kb on - strandat 4785.410 kb on - strandat 4785.411 kb on - strandat 4785.416 kb on - strandat 4785.416 kb on - strandat 4785.416 kb on - strandat 4785.416 kb on - strandat 4785.416 kb on - strandat 4785.416 kb on - strandat 4785.421 kb on - strandat 4785.421 kb on - strandat 4785.495 kb on - strand, within BWI76_RS22920at 4785.495 kb on - strand, within BWI76_RS22920at 4785.495 kb on - strand, within BWI76_RS22920at 4785.518 kb on + strand, within BWI76_RS22920at 4785.561 kb on - strand, within BWI76_RS22920at 4785.617 kb on + strand, within BWI76_RS22920at 4785.617 kb on + strand, within BWI76_RS22920at 4785.617 kb on + strand, within BWI76_RS22920at 4785.620 kb on - strand, within BWI76_RS22920at 4785.639 kb on + strand, within BWI76_RS22920at 4785.639 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.644 kb on + strand, within BWI76_RS22920at 4785.647 kb on - strand, within BWI76_RS22920at 4785.647 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strandat 4785.652 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strand, within BWI76_RS22920at 4785.652 kb on - strand, within BWI76_RS22920at 4785.655 kb on + strand, within BWI76_RS22920at 4785.663 kb on + strand, within BWI76_RS22920at 4785.671 kb on - strandat 4785.676 kb on + strand, within BWI76_RS22920at 4785.676 kb on - strand, within BWI76_RS22920at 4785.695 kb on + strand, within BWI76_RS22920at 4785.695 kb on + strand, within BWI76_RS22920at 4785.703 kb on - strand, within BWI76_RS22920at 4785.703 kb on - strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.785 kb on + strand, within BWI76_RS22920at 4785.795 kb on + strand, within BWI76_RS22920at 4785.802 kb on + strand, within BWI76_RS22920at 4785.802 kb on + strand, within BWI76_RS22920at 4785.804 kb on + strand, within BWI76_RS22920at 4785.810 kb on - strand, within BWI76_RS22920at 4785.819 kb on - strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.855 kb on - strand, within BWI76_RS22920at 4785.855 kb on - strand, within BWI76_RS22920at 4785.856 kb on + strand, within BWI76_RS22920at 4785.892 kb on + strand, within BWI76_RS22920at 4785.901 kb on + strand, within BWI76_RS22920at 4785.901 kb on + strand, within BWI76_RS22920at 4785.909 kb on - strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.920 kb on - strand, within BWI76_RS22920at 4785.921 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.931 kb on + strand, within BWI76_RS22920at 4785.931 kb on + strand, within BWI76_RS22920at 4785.935 kb on + strand, within BWI76_RS22920at 4785.962 kb on - strand, within BWI76_RS22920at 4785.978 kb on + strand, within BWI76_RS22920at 4786.053 kb on - strand, within BWI76_RS22920at 4786.113 kb on + strand, within BWI76_RS22920at 4786.124 kb on + strand, within BWI76_RS22920at 4786.132 kb on - strand, within BWI76_RS22920at 4786.323 kb on - strand, within BWI76_RS22920at 4786.514 kb on - strandat 4786.524 kb on - strandat 4786.759 kb on + strandat 4786.820 kb on - strandat 4786.948 kb on - strand, within BWI76_RS22925at 4787.415 kb on + strand, within BWI76_RS22925at 4787.423 kb on - strand, within BWI76_RS22925at 4787.439 kb on - strand, within BWI76_RS22925at 4787.633 kb on - strand, within BWI76_RS22925

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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4,784,356 + BWI76_RS22915 0.36 -4.4
4,784,409 - BWI76_RS22915 0.44 -2.6
4,784,409 - BWI76_RS22915 0.44 -3.1
4,784,419 - BWI76_RS22915 0.46 -4.4
4,784,495 + BWI76_RS22915 0.57 -2.4
4,784,512 + +0.4
4,784,558 + BWI76_RS22915 0.67 -4.6
4,784,605 - BWI76_RS22915 0.74 -6.0
4,784,605 - BWI76_RS22915 0.74 -3.3
4,784,624 - BWI76_RS22915 0.77 -1.1
4,784,641 + BWI76_RS22915 0.80 -4.0
4,784,651 + BWI76_RS22915 0.81 -4.7
4,784,664 - BWI76_RS22915 0.83 -2.4
4,784,664 - BWI76_RS22915 0.83 -5.0
4,784,670 - BWI76_RS22915 0.84 -2.9
4,784,684 - BWI76_RS22915 0.87 -4.3
4,784,684 - BWI76_RS22915 0.87 -3.8
4,784,691 + BWI76_RS22915 0.88 -4.6
4,784,699 - BWI76_RS22915 0.89 -3.0
4,784,704 - BWI76_RS22915 0.90 -3.3
4,784,704 - BWI76_RS22915 0.90 -3.6
4,784,704 - BWI76_RS22915 0.90 -2.9
4,784,704 - BWI76_RS22915 0.90 -3.3
4,784,704 - BWI76_RS22915 0.90 -4.5
4,784,704 - BWI76_RS22915 0.90 -2.0
4,784,709 - -1.8
4,784,709 - -5.4
4,784,709 - -1.2
4,784,709 - -2.7
4,784,730 - -1.6
4,784,730 - -3.5
4,784,730 - -2.3
4,784,730 - -4.8
4,784,732 + -3.5
4,784,740 - -3.8
4,784,740 - -0.8
4,784,740 - -1.6
4,784,753 - -3.9
4,784,762 - -1.6
4,784,762 - -1.7
4,784,762 - -2.9
4,784,763 - -0.9
4,784,763 - -3.1
4,784,763 - -2.9
4,784,767 - -2.8
4,784,794 - -2.2
4,784,827 - -3.6
4,784,835 + -1.9
4,784,835 + -0.2
4,784,837 + -0.9
4,784,843 - -0.6
4,784,866 - -1.6
4,784,887 - -3.0
4,784,905 + -2.3
4,784,905 + -2.2
4,784,910 + -1.3
4,784,910 + -2.5
4,784,913 - -1.6
4,784,913 - -2.4
4,785,026 - -0.1
4,785,149 + -1.3
4,785,155 + -0.3
4,785,230 + +1.4
4,785,236 - -1.4
4,785,248 - +0.4
4,785,256 + -0.8
4,785,265 + -0.3
4,785,284 + -1.3
4,785,285 + -1.7
4,785,285 + +1.0
4,785,285 + -0.2
4,785,292 - -1.5
4,785,293 - -0.8
4,785,293 - -4.7
4,785,308 + +0.2
4,785,308 + -0.4
4,785,308 + -1.8
4,785,316 - +0.4
4,785,316 - -1.9
4,785,343 - -2.0
4,785,368 + -0.4
4,785,386 - -1.7
4,785,394 + -2.1
4,785,397 - -1.2
4,785,397 - +0.6
4,785,397 - -2.4
4,785,402 - -1.3
4,785,404 - -2.0
4,785,410 - -2.3
4,785,411 - -0.7
4,785,416 - -1.4
4,785,416 - -0.2
4,785,416 - +1.4
4,785,416 - -2.1
4,785,416 - -1.4
4,785,416 - -2.5
4,785,421 - -1.6
4,785,421 - -1.1
4,785,495 - BWI76_RS22920 0.13 -0.7
4,785,495 - BWI76_RS22920 0.13 -0.9
4,785,495 - BWI76_RS22920 0.13 +0.1
4,785,518 + BWI76_RS22920 0.14 -1.2
4,785,561 - BWI76_RS22920 0.18 -0.9
4,785,617 + BWI76_RS22920 0.22 -2.8
4,785,617 + BWI76_RS22920 0.22 -0.8
4,785,617 + BWI76_RS22920 0.22 -1.4
4,785,620 - BWI76_RS22920 0.22 -2.3
4,785,639 + BWI76_RS22920 0.24 -0.1
4,785,639 + BWI76_RS22920 0.24 -3.4
4,785,644 + BWI76_RS22920 0.24 -2.4
4,785,644 + BWI76_RS22920 0.24 -0.9
4,785,644 + BWI76_RS22920 0.24 -2.3
4,785,644 + BWI76_RS22920 0.24 -2.4
4,785,644 + BWI76_RS22920 0.24 -1.7
4,785,644 + BWI76_RS22920 0.24 -2.4
4,785,644 + BWI76_RS22920 0.24 -0.6
4,785,644 + BWI76_RS22920 0.24 -0.5
4,785,644 + BWI76_RS22920 0.24 -1.3
4,785,647 - BWI76_RS22920 0.24 +0.9
4,785,647 - BWI76_RS22920 0.24 -0.7
4,785,652 - -1.6
4,785,652 - BWI76_RS22920 0.25 +0.1
4,785,652 - BWI76_RS22920 0.25 +0.4
4,785,652 - BWI76_RS22920 0.25 -0.9
4,785,652 - BWI76_RS22920 0.25 -0.3
4,785,652 - BWI76_RS22920 0.25 -1.6
4,785,652 - BWI76_RS22920 0.25 -2.1
4,785,655 + BWI76_RS22920 0.25 -2.5
4,785,663 + BWI76_RS22920 0.25 -0.2
4,785,671 - -0.9
4,785,676 + BWI76_RS22920 0.26 -1.9
4,785,676 - BWI76_RS22920 0.26 -1.6
4,785,695 + BWI76_RS22920 0.28 -1.3
4,785,695 + BWI76_RS22920 0.28 -2.5
4,785,703 - BWI76_RS22920 0.28 -0.9
4,785,703 - BWI76_RS22920 0.28 -1.8
4,785,711 + BWI76_RS22920 0.29 -1.5
4,785,711 + BWI76_RS22920 0.29 -2.7
4,785,711 + BWI76_RS22920 0.29 -2.2
4,785,711 + BWI76_RS22920 0.29 -1.9
4,785,711 + BWI76_RS22920 0.29 -0.8
4,785,711 + BWI76_RS22920 0.29 -1.6
4,785,711 + BWI76_RS22920 0.29 +0.4
4,785,719 - BWI76_RS22920 0.30 +1.4
4,785,719 - BWI76_RS22920 0.30 -1.5
4,785,719 - BWI76_RS22920 0.30 -2.6
4,785,719 - BWI76_RS22920 0.30 -2.1
4,785,719 - BWI76_RS22920 0.30 -2.6
4,785,779 + BWI76_RS22920 0.34 -1.7
4,785,779 + BWI76_RS22920 0.34 -2.0
4,785,779 + BWI76_RS22920 0.34 -0.6
4,785,784 + BWI76_RS22920 0.35 -0.2
4,785,784 + BWI76_RS22920 0.35 -0.0
4,785,784 + BWI76_RS22920 0.35 -1.1
4,785,785 + BWI76_RS22920 0.35 -2.4
4,785,795 + BWI76_RS22920 0.35 -1.8
4,785,802 + BWI76_RS22920 0.36 -0.8
4,785,802 + BWI76_RS22920 0.36 -0.7
4,785,804 + BWI76_RS22920 0.36 -1.0
4,785,810 - BWI76_RS22920 0.37 -2.3
4,785,819 - BWI76_RS22920 0.37 -0.3
4,785,847 + BWI76_RS22920 0.39 -2.0
4,785,847 + BWI76_RS22920 0.39 -1.0
4,785,847 + BWI76_RS22920 0.39 -1.6
4,785,847 + BWI76_RS22920 0.39 -2.3
4,785,847 + BWI76_RS22920 0.39 -1.8
4,785,855 - BWI76_RS22920 0.40 -1.9
4,785,855 - BWI76_RS22920 0.40 -1.5
4,785,856 + BWI76_RS22920 0.40 -1.7
4,785,892 + BWI76_RS22920 0.43 -0.6
4,785,901 + BWI76_RS22920 0.44 -0.2
4,785,901 + BWI76_RS22920 0.44 -2.5
4,785,909 - BWI76_RS22920 0.44 -2.2
4,785,911 + BWI76_RS22920 0.44 -1.7
4,785,911 + BWI76_RS22920 0.44 -2.0
4,785,911 + BWI76_RS22920 0.44 -2.2
4,785,911 + BWI76_RS22920 0.44 -1.9
4,785,911 + BWI76_RS22920 0.44 -1.6
4,785,919 - BWI76_RS22920 0.45 -1.2
4,785,919 - BWI76_RS22920 0.45 -2.4
4,785,919 - BWI76_RS22920 0.45 -2.4
4,785,920 - BWI76_RS22920 0.45 -1.8
4,785,921 + BWI76_RS22920 0.45 -0.3
4,785,926 + BWI76_RS22920 0.45 -1.5
4,785,926 + BWI76_RS22920 0.45 -2.1
4,785,926 + BWI76_RS22920 0.45 -0.4
4,785,931 + BWI76_RS22920 0.46 -2.4
4,785,931 + BWI76_RS22920 0.46 +1.4
4,785,935 + BWI76_RS22920 0.46 -1.3
4,785,962 - BWI76_RS22920 0.48 -1.4
4,785,978 + BWI76_RS22920 0.49 -0.9
4,786,053 - BWI76_RS22920 0.55 -2.9
4,786,113 + BWI76_RS22920 0.60 +0.2
4,786,124 + BWI76_RS22920 0.61 -2.1
4,786,132 - BWI76_RS22920 0.61 -1.0
4,786,323 - BWI76_RS22920 0.76 -2.2
4,786,514 - +0.1
4,786,524 - -1.5
4,786,759 + -1.0
4,786,820 - -3.0
4,786,948 - BWI76_RS22925 0.16 -0.5
4,787,415 + BWI76_RS22925 0.42 -1.2
4,787,423 - BWI76_RS22925 0.42 -1.7
4,787,439 - BWI76_RS22925 0.43 -1.7
4,787,633 - BWI76_RS22925 0.54 -2.0

Or see this region's nucleotide sequence