Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19045

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19040 and BWI76_RS19045 are separated by 37 nucleotidesBWI76_RS19045 and BWI76_RS19050 are separated by 317 nucleotides BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347 _RS19040 BWI76_RS19045: BWI76_RS19045 - capsular polysaccharide biosynthesis protein, at 3,955,385 to 3,956,353 _RS19045 BWI76_RS19050: BWI76_RS19050 - NAD(P)-dependent oxidoreductase, at 3,956,671 to 3,957,525 _RS19050 Position (kb) 3955 3956 3957Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 3954.461 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.714 kb on - strand, within BWI76_RS19040at 3954.782 kb on - strand, within BWI76_RS19040at 3955.187 kb on - strand, within BWI76_RS19040at 3955.673 kb on - strand, within BWI76_RS19045at 3955.800 kb on - strand, within BWI76_RS19045at 3955.800 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.948 kb on - strand, within BWI76_RS19045at 3955.967 kb on - strand, within BWI76_RS19045at 3956.156 kb on - strand, within BWI76_RS19045at 3956.169 kb on - strand, within BWI76_RS19045at 3956.169 kb on - strand, within BWI76_RS19045at 3956.286 kb on - strandat 3956.552 kb on - strandat 3956.578 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.677 kb on - strandat 3956.712 kb on - strandat 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.757 kb on - strand, within BWI76_RS19050at 3956.788 kb on - strand, within BWI76_RS19050at 3956.794 kb on - strand, within BWI76_RS19050at 3956.794 kb on - strand, within BWI76_RS19050at 3956.815 kb on - strand, within BWI76_RS19050at 3956.815 kb on - strand, within BWI76_RS19050at 3956.970 kb on - strand, within BWI76_RS19050at 3956.979 kb on - strand, within BWI76_RS19050at 3956.979 kb on - strand, within BWI76_RS19050at 3956.985 kb on - strand, within BWI76_RS19050at 3956.989 kb on - strand, within BWI76_RS19050at 3957.040 kb on - strand, within BWI76_RS19050at 3957.040 kb on - strand, within BWI76_RS19050at 3957.047 kb on - strand, within BWI76_RS19050at 3957.206 kb on - strandat 3957.251 kb on - strand, within BWI76_RS19050at 3957.331 kb on - strand, within BWI76_RS19050

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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3,954,461 - BWI76_RS19040 0.22 -4.7
3,954,496 - BWI76_RS19040 0.25 -3.8
3,954,496 - BWI76_RS19040 0.25 -1.8
3,954,496 - BWI76_RS19040 0.25 -3.4
3,954,506 - BWI76_RS19040 0.26 -1.2
3,954,506 - BWI76_RS19040 0.26 -2.6
3,954,714 - BWI76_RS19040 0.44 -3.9
3,954,782 - BWI76_RS19040 0.50 -4.0
3,955,187 - BWI76_RS19040 0.86 -4.7
3,955,673 - BWI76_RS19045 0.30 -4.6
3,955,800 - BWI76_RS19045 0.43 -4.6
3,955,800 - BWI76_RS19045 0.43 -2.8
3,955,810 - BWI76_RS19045 0.44 -3.7
3,955,810 - BWI76_RS19045 0.44 -4.0
3,955,810 - BWI76_RS19045 0.44 -2.9
3,955,948 - BWI76_RS19045 0.58 -3.0
3,955,967 - BWI76_RS19045 0.60 -3.3
3,956,156 - BWI76_RS19045 0.80 -2.9
3,956,169 - BWI76_RS19045 0.81 -2.6
3,956,169 - BWI76_RS19045 0.81 -3.4
3,956,286 - -3.4
3,956,552 - -1.0
3,956,578 - +1.3
3,956,677 - +0.4
3,956,677 - +0.1
3,956,677 - +1.8
3,956,677 - +0.5
3,956,677 - -0.2
3,956,677 - +0.5
3,956,677 - -0.8
3,956,677 - +1.1
3,956,712 - -2.9
3,956,757 - BWI76_RS19050 0.10 -1.2
3,956,757 - BWI76_RS19050 0.10 -3.1
3,956,757 - BWI76_RS19050 0.10 -5.2
3,956,757 - BWI76_RS19050 0.10 -3.2
3,956,757 - BWI76_RS19050 0.10 -3.9
3,956,757 - BWI76_RS19050 0.10 -1.7
3,956,757 - BWI76_RS19050 0.10 -4.2
3,956,757 - BWI76_RS19050 0.10 -3.3
3,956,757 - BWI76_RS19050 0.10 -2.9
3,956,757 - BWI76_RS19050 0.10 -0.5
3,956,788 - BWI76_RS19050 0.14 -4.1
3,956,794 - BWI76_RS19050 0.14 -2.6
3,956,794 - BWI76_RS19050 0.14 -3.8
3,956,815 - BWI76_RS19050 0.17 -2.9
3,956,815 - BWI76_RS19050 0.17 -2.5
3,956,970 - BWI76_RS19050 0.35 -4.3
3,956,979 - BWI76_RS19050 0.36 -2.5
3,956,979 - BWI76_RS19050 0.36 -4.1
3,956,985 - BWI76_RS19050 0.37 -4.8
3,956,989 - BWI76_RS19050 0.37 -3.4
3,957,040 - BWI76_RS19050 0.43 -2.0
3,957,040 - BWI76_RS19050 0.43 -1.8
3,957,047 - BWI76_RS19050 0.44 -2.9
3,957,206 - +0.8
3,957,251 - BWI76_RS19050 0.68 -2.0
3,957,331 - BWI76_RS19050 0.77 -0.7

Or see this region's nucleotide sequence