Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16200 and BWI76_RS16205 are separated by 10 nucleotides BWI76_RS16205 and BWI76_RS16210 are separated by 343 nucleotides BWI76_RS16210 and BWI76_RS16215 overlap by 4 nucleotides
BWI76_RS16200: BWI76_RS16200 - NAD(P) transhydrogenase subunit beta, at 3,360,887 to 3,362,275
_RS16200
BWI76_RS16205: BWI76_RS16205 - NAD(P) transhydrogenase subunit alpha, at 3,362,286 to 3,363,815
_RS16205
BWI76_RS16210: BWI76_RS16210 - hypothetical protein, at 3,364,159 to 3,364,341
_RS16210
BWI76_RS16215: BWI76_RS16215 - hypothetical protein, at 3,364,338 to 3,365,288
_RS16215
Position (kb)
3362
3363
3364 Strain fitness (log2 ratio)
-2
-1
0
1 at 3361.714 kb on + strand, within BWI76_RS16200 at 3361.912 kb on + strand, within BWI76_RS16200 at 3361.920 kb on - strand, within BWI76_RS16200 at 3362.174 kb on - strand at 3362.182 kb on + strand at 3362.246 kb on + strand at 3362.250 kb on - strand at 3362.283 kb on + strand at 3362.291 kb on - strand at 3362.404 kb on + strand at 3362.457 kb on + strand, within BWI76_RS16205 at 3362.797 kb on + strand, within BWI76_RS16205 at 3363.199 kb on + strand, within BWI76_RS16205 at 3363.293 kb on + strand, within BWI76_RS16205 at 3363.315 kb on - strand, within BWI76_RS16205 at 3363.786 kb on - strand at 3363.893 kb on + strand at 3364.072 kb on + strand at 3364.250 kb on + strand, within BWI76_RS16210 at 3364.318 kb on - strand, within BWI76_RS16210 at 3364.356 kb on + strand at 3364.364 kb on - strand at 3364.458 kb on + strand, within BWI76_RS16215 at 3364.581 kb on - strand, within BWI76_RS16215 at 3364.813 kb on + strand, within BWI76_RS16215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,361,714 + BWI76_RS16200 0.60 -0.5 3,361,912 + BWI76_RS16200 0.74 -0.1 3,361,920 - BWI76_RS16200 0.74 -0.5 3,362,174 - +0.9 3,362,182 + -0.6 3,362,246 + -1.0 3,362,250 - +0.2 3,362,283 + -0.6 3,362,291 - -0.6 3,362,404 + +0.0 3,362,457 + BWI76_RS16205 0.11 -0.4 3,362,797 + BWI76_RS16205 0.33 -0.5 3,363,199 + BWI76_RS16205 0.60 -1.9 3,363,293 + BWI76_RS16205 0.66 -1.0 3,363,315 - BWI76_RS16205 0.67 -0.8 3,363,786 - -1.3 3,363,893 + +0.3 3,364,072 + -0.9 3,364,250 + BWI76_RS16210 0.50 -1.4 3,364,318 - BWI76_RS16210 0.87 -1.0 3,364,356 + +1.3 3,364,364 - +1.3 3,364,458 + BWI76_RS16215 0.13 -0.3 3,364,581 - BWI76_RS16215 0.26 +0.2 3,364,813 + BWI76_RS16215 0.50 +0.3
Or see this region's nucleotide sequence