Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06675 and BWI76_RS06680 are separated by 166 nucleotides BWI76_RS06680 and BWI76_RS06685 are separated by 2 nucleotides
BWI76_RS06675: BWI76_RS06675 - nickel/cobalt efflux protein RcnA, at 1,399,250 to 1,400,083
_RS06675
BWI76_RS06680: BWI76_RS06680 - hypothetical protein, at 1,400,250 to 1,400,522
_RS06680
BWI76_RS06685: BWI76_RS06685 - cyclic diguanylate phosphodiesterase (EAL) domain-containing protein, at 1,400,525 to 1,402,111
_RS06685
Position (kb)
1400
1401 Strain fitness (log2 ratio)
-1
0
1 at 1399.301 kb on - strand at 1399.444 kb on + strand, within BWI76_RS06675 at 1399.452 kb on - strand, within BWI76_RS06675 at 1399.489 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.562 kb on - strand, within BWI76_RS06675 at 1399.640 kb on + strand, within BWI76_RS06675 at 1399.808 kb on - strand, within BWI76_RS06675 at 1399.818 kb on - strand, within BWI76_RS06675 at 1399.886 kb on - strand, within BWI76_RS06675 at 1399.934 kb on + strand, within BWI76_RS06675 at 1399.993 kb on + strand, within BWI76_RS06675 at 1399.993 kb on + strand, within BWI76_RS06675 at 1399.993 kb on + strand, within BWI76_RS06675 at 1400.001 kb on - strand at 1400.010 kb on + strand at 1400.020 kb on + strand at 1400.252 kb on + strand at 1400.473 kb on + strand, within BWI76_RS06680 at 1400.523 kb on + strand at 1400.627 kb on - strand at 1400.632 kb on - strand at 1400.676 kb on + strand at 1400.746 kb on + strand, within BWI76_RS06685 at 1400.754 kb on - strand, within BWI76_RS06685 at 1400.829 kb on - strand, within BWI76_RS06685 at 1400.843 kb on - strand, within BWI76_RS06685 at 1400.911 kb on + strand, within BWI76_RS06685 at 1401.047 kb on - strand, within BWI76_RS06685 at 1401.076 kb on - strand, within BWI76_RS06685 at 1401.202 kb on + strand, within BWI76_RS06685 at 1401.459 kb on + strand, within BWI76_RS06685 at 1401.482 kb on + strand, within BWI76_RS06685 at 1401.482 kb on + strand, within BWI76_RS06685 at 1401.496 kb on - strand, within BWI76_RS06685
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 1,399,301 - -0.2 1,399,444 + BWI76_RS06675 0.23 +0.0 1,399,452 - BWI76_RS06675 0.24 +0.5 1,399,489 + BWI76_RS06675 0.29 +0.8 1,399,554 + BWI76_RS06675 0.36 +0.4 1,399,554 + BWI76_RS06675 0.36 -0.0 1,399,554 + BWI76_RS06675 0.36 +0.4 1,399,562 - BWI76_RS06675 0.37 +0.0 1,399,640 + BWI76_RS06675 0.47 -0.4 1,399,808 - BWI76_RS06675 0.67 +0.3 1,399,818 - BWI76_RS06675 0.68 -0.4 1,399,886 - BWI76_RS06675 0.76 +0.3 1,399,934 + BWI76_RS06675 0.82 -1.5 1,399,993 + BWI76_RS06675 0.89 -0.3 1,399,993 + BWI76_RS06675 0.89 +0.1 1,399,993 + BWI76_RS06675 0.89 +0.8 1,400,001 - +0.2 1,400,010 + -0.3 1,400,020 + -0.3 1,400,252 + -0.0 1,400,473 + BWI76_RS06680 0.82 +0.6 1,400,523 + -0.5 1,400,627 - +0.6 1,400,632 - -0.2 1,400,676 + +0.4 1,400,746 + BWI76_RS06685 0.14 +0.0 1,400,754 - BWI76_RS06685 0.14 -0.2 1,400,829 - BWI76_RS06685 0.19 +0.2 1,400,843 - BWI76_RS06685 0.20 -0.2 1,400,911 + BWI76_RS06685 0.24 +0.2 1,401,047 - BWI76_RS06685 0.33 +0.4 1,401,076 - BWI76_RS06685 0.35 +0.1 1,401,202 + BWI76_RS06685 0.43 -0.4 1,401,459 + BWI76_RS06685 0.59 +1.2 1,401,482 + BWI76_RS06685 0.60 -0.5 1,401,482 + BWI76_RS06685 0.60 -0.5 1,401,496 - BWI76_RS06685 0.61 +0.2
Or see this region's nucleotide sequence