Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06680

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06675 and BWI76_RS06680 are separated by 166 nucleotidesBWI76_RS06680 and BWI76_RS06685 are separated by 2 nucleotides BWI76_RS06675: BWI76_RS06675 - nickel/cobalt efflux protein RcnA, at 1,399,250 to 1,400,083 _RS06675 BWI76_RS06680: BWI76_RS06680 - hypothetical protein, at 1,400,250 to 1,400,522 _RS06680 BWI76_RS06685: BWI76_RS06685 - cyclic diguanylate phosphodiesterase (EAL) domain-containing protein, at 1,400,525 to 1,402,111 _RS06685 Position (kb) 1400 1401Strain fitness (log2 ratio) -1 0 1at 1399.301 kb on - strandat 1399.444 kb on + strand, within BWI76_RS06675at 1399.452 kb on - strand, within BWI76_RS06675at 1399.489 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.562 kb on - strand, within BWI76_RS06675at 1399.640 kb on + strand, within BWI76_RS06675at 1399.808 kb on - strand, within BWI76_RS06675at 1399.818 kb on - strand, within BWI76_RS06675at 1399.886 kb on - strand, within BWI76_RS06675at 1399.934 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1400.001 kb on - strandat 1400.010 kb on + strandat 1400.020 kb on + strandat 1400.252 kb on + strandat 1400.473 kb on + strand, within BWI76_RS06680at 1400.523 kb on + strandat 1400.627 kb on - strandat 1400.632 kb on - strandat 1400.676 kb on + strandat 1400.746 kb on + strand, within BWI76_RS06685at 1400.754 kb on - strand, within BWI76_RS06685at 1400.829 kb on - strand, within BWI76_RS06685at 1400.843 kb on - strand, within BWI76_RS06685at 1400.911 kb on + strand, within BWI76_RS06685at 1401.047 kb on - strand, within BWI76_RS06685at 1401.076 kb on - strand, within BWI76_RS06685at 1401.202 kb on + strand, within BWI76_RS06685at 1401.459 kb on + strand, within BWI76_RS06685at 1401.482 kb on + strand, within BWI76_RS06685at 1401.482 kb on + strand, within BWI76_RS06685at 1401.496 kb on - strand, within BWI76_RS06685

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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1,399,301 - -0.2
1,399,444 + BWI76_RS06675 0.23 +0.0
1,399,452 - BWI76_RS06675 0.24 +0.5
1,399,489 + BWI76_RS06675 0.29 +0.8
1,399,554 + BWI76_RS06675 0.36 +0.4
1,399,554 + BWI76_RS06675 0.36 -0.0
1,399,554 + BWI76_RS06675 0.36 +0.4
1,399,562 - BWI76_RS06675 0.37 +0.0
1,399,640 + BWI76_RS06675 0.47 -0.4
1,399,808 - BWI76_RS06675 0.67 +0.3
1,399,818 - BWI76_RS06675 0.68 -0.4
1,399,886 - BWI76_RS06675 0.76 +0.3
1,399,934 + BWI76_RS06675 0.82 -1.5
1,399,993 + BWI76_RS06675 0.89 -0.3
1,399,993 + BWI76_RS06675 0.89 +0.1
1,399,993 + BWI76_RS06675 0.89 +0.8
1,400,001 - +0.2
1,400,010 + -0.3
1,400,020 + -0.3
1,400,252 + -0.0
1,400,473 + BWI76_RS06680 0.82 +0.6
1,400,523 + -0.5
1,400,627 - +0.6
1,400,632 - -0.2
1,400,676 + +0.4
1,400,746 + BWI76_RS06685 0.14 +0.0
1,400,754 - BWI76_RS06685 0.14 -0.2
1,400,829 - BWI76_RS06685 0.19 +0.2
1,400,843 - BWI76_RS06685 0.20 -0.2
1,400,911 + BWI76_RS06685 0.24 +0.2
1,401,047 - BWI76_RS06685 0.33 +0.4
1,401,076 - BWI76_RS06685 0.35 +0.1
1,401,202 + BWI76_RS06685 0.43 -0.4
1,401,459 + BWI76_RS06685 0.59 +1.2
1,401,482 + BWI76_RS06685 0.60 -0.5
1,401,482 + BWI76_RS06685 0.60 -0.5
1,401,496 - BWI76_RS06685 0.61 +0.2

Or see this region's nucleotide sequence