Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01265

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01260 and BWI76_RS01265 are separated by 43 nucleotidesBWI76_RS01265 and BWI76_RS01270 are separated by 88 nucleotidesBWI76_RS01270 and BWI76_RS01275 overlap by 113 nucleotides BWI76_RS01260: BWI76_RS01260 - lysophospholipase L2, at 258,083 to 259,075 _RS01260 BWI76_RS01265: BWI76_RS01265 - sugar/pyridoxal phosphate phosphatase YigL, at 259,119 to 259,919 _RS01265 BWI76_RS01270: BWI76_RS01270 - hypothetical protein, at 260,008 to 260,907 _RS01270 BWI76_RS01275: BWI76_RS01275 - LysR family transcriptional regulator, at 260,795 to 261,748 _RS01275 Position (kb) 259 260Strain fitness (log2 ratio) -1 0 1at 258.332 kb on - strand, within BWI76_RS01260at 258.485 kb on + strand, within BWI76_RS01260at 258.620 kb on + strand, within BWI76_RS01260at 258.620 kb on + strand, within BWI76_RS01260at 258.628 kb on - strand, within BWI76_RS01260at 258.689 kb on + strand, within BWI76_RS01260at 258.907 kb on - strand, within BWI76_RS01260at 258.955 kb on - strand, within BWI76_RS01260at 258.963 kb on + strand, within BWI76_RS01260at 259.069 kb on + strandat 259.099 kb on + strandat 259.099 kb on + strandat 259.186 kb on + strandat 259.508 kb on - strand, within BWI76_RS01265at 259.635 kb on + strand, within BWI76_RS01265at 259.660 kb on + strand, within BWI76_RS01265at 259.701 kb on - strand, within BWI76_RS01265at 259.750 kb on - strand, within BWI76_RS01265at 259.760 kb on + strand, within BWI76_RS01265at 259.769 kb on - strand, within BWI76_RS01265at 259.806 kb on + strand, within BWI76_RS01265at 259.846 kb on - strandat 260.025 kb on - strandat 260.056 kb on - strandat 260.125 kb on + strand, within BWI76_RS01270at 260.163 kb on + strand, within BWI76_RS01270at 260.184 kb on + strand, within BWI76_RS01270at 260.206 kb on - strand, within BWI76_RS01270at 260.450 kb on + strand, within BWI76_RS01270at 260.451 kb on + strand, within BWI76_RS01270at 260.459 kb on - strand, within BWI76_RS01270at 260.522 kb on - strand, within BWI76_RS01270at 260.522 kb on - strand, within BWI76_RS01270at 260.578 kb on - strand, within BWI76_RS01270

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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258,332 - BWI76_RS01260 0.25 +1.5
258,485 + BWI76_RS01260 0.40 +0.4
258,620 + BWI76_RS01260 0.54 +0.2
258,620 + BWI76_RS01260 0.54 -0.8
258,628 - BWI76_RS01260 0.55 -0.1
258,689 + BWI76_RS01260 0.61 -0.1
258,907 - BWI76_RS01260 0.83 +0.9
258,955 - BWI76_RS01260 0.88 -0.2
258,963 + BWI76_RS01260 0.89 +0.2
259,069 + +0.5
259,099 + +0.9
259,099 + +0.1
259,186 + +0.1
259,508 - BWI76_RS01265 0.49 +0.0
259,635 + BWI76_RS01265 0.64 +0.3
259,660 + BWI76_RS01265 0.68 +0.4
259,701 - BWI76_RS01265 0.73 +0.3
259,750 - BWI76_RS01265 0.79 +0.2
259,760 + BWI76_RS01265 0.80 +1.2
259,769 - BWI76_RS01265 0.81 -0.3
259,806 + BWI76_RS01265 0.86 +1.0
259,846 - -0.2
260,025 - -0.2
260,056 - -0.3
260,125 + BWI76_RS01270 0.13 +0.2
260,163 + BWI76_RS01270 0.17 -0.1
260,184 + BWI76_RS01270 0.20 +0.7
260,206 - BWI76_RS01270 0.22 -0.6
260,450 + BWI76_RS01270 0.49 -0.3
260,451 + BWI76_RS01270 0.49 -0.2
260,459 - BWI76_RS01270 0.50 -0.3
260,522 - BWI76_RS01270 0.57 +0.1
260,522 - BWI76_RS01270 0.57 -0.4
260,578 - BWI76_RS01270 0.63 +1.1

Or see this region's nucleotide sequence