Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28840

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
6,274,396	+		AO353_28835	0.36	-0.0
6,274,396	+		AO353_28835	0.36	-0.2
6,274,397	-		AO353_28835	0.36	+0.6
6,274,454	+		AO353_28835	0.43	-0.9
6,274,454	+		AO353_28835	0.43	+0.5
6,274,455	-		AO353_28835	0.43	+0.7
6,274,527	-		AO353_28835	0.51	+0.7
6,274,641	-		AO353_28835	0.63	+1.1
6,274,696	+		AO353_28835	0.69	-0.8
6,274,696	+		AO353_28835	0.69	+1.1
6,274,697	-		AO353_28835	0.70	-0.7
6,274,697	-		AO353_28835	0.70	+0.4
6,274,697	-		AO353_28835	0.70	-0.5
6,274,757	+		AO353_28835	0.76	-0.0
6,274,758	-		AO353_28835	0.76	-1.0
6,274,775	+		AO353_28835	0.78	-1.7
6,274,775	+		AO353_28835	0.78	+0.5
6,274,776	-		AO353_28835	0.78	+1.6
6,274,809	+		AO353_28835	0.82	-1.0
6,274,809	+		AO353_28835	0.82	+1.0
6,274,809	+		AO353_28835	0.82	-1.1
6,274,810	-		AO353_28835	0.82	+0.3
6,274,810	-		AO353_28835	0.82	-0.4
6,274,836	+		AO353_28835	0.85	-1.1
6,274,837	-		AO353_28835	0.85	-2.1
6,274,887	+				-1.4
6,274,887	+				-0.4
6,274,887	+				+0.4
6,274,888	-				-0.6
6,274,888	-				-0.0
6,274,899	+				-0.4
6,274,899	+				-0.7
6,274,899	+				+0.9
6,274,900	-				-0.0
6,274,900	-				+0.3
6,274,941	+				-0.9
6,274,941	+				+1.1
6,274,942	-				+0.3
6,274,942	-				+0.5
6,274,961	+				-0.8
6,274,962	-				-0.2
6,274,962	-				+0.8
6,274,962	-				+1.1
6,274,962	-				-0.0
6,275,005	+				-0.0
6,275,006	-				+0.6
6,275,006	-				-1.9
6,275,018	+				+0.7
6,275,018	+				+0.9
6,275,018	+				+0.5
6,275,019	-				-0.2
6,275,019	-				-0.5
6,275,044	+				-0.6
6,275,066	+				+0.7
6,275,066	+				+0.8
6,275,066	+				+0.8
6,275,067	-				-1.6
6,275,067	-				-2.9
6,275,067	-				+0.3
6,275,070	+				+0.0
6,275,070	+				-1.7
6,275,070	+				+0.6
6,275,070	+				-1.1
6,275,070	+				-1.6
6,275,070	+				+0.7
6,275,070	+				-0.4
6,275,070	+				+0.2
6,275,070	+				-3.0
6,275,071	-				-0.1
6,275,071	-				+0.0
6,275,071	-				-0.5
6,275,071	-				+1.3
6,275,071	-				-0.4
6,275,078	+				-0.7
6,275,079	-				-1.0
6,275,079	-				-1.5
6,275,079	-				-2.3
6,275,079	-				-0.4
6,275,080	+				+0.8
6,275,080	+				-0.2
6,275,080	+				+0.1
6,275,080	+				-1.7
6,275,080	+				+0.8
6,275,080	+				-0.3
6,275,080	+				-0.9
6,275,080	+				+1.8
6,275,080	+				-0.3
6,275,080	+				-0.0
6,275,081	-				-0.7
6,275,081	-				+0.6
6,275,081	-				-0.5
6,275,081	-				+0.3
6,275,081	-				+0.5
6,275,081	-				+0.4
6,275,096	+				-0.9
6,275,096	+				+0.8
6,275,097	-				-0.9
6,275,097	-				-0.1
6,275,104	+				-0.0
6,275,104	+				+0.4
6,275,104	+				-1.2
6,275,157	+				-0.3
6,275,164	+				-0.8
6,275,164	+				+1.8
6,275,164	+				+1.2
6,275,164	+				-0.9
6,275,165	-				-1.2
6,275,165	-				+0.3
6,275,165	-				-1.1
6,275,165	-				-0.0
6,275,165	-				-0.0
6,275,165	-				+0.2
6,275,165	-				+1.4
6,275,205	+				+1.2
6,275,205	+				+1.0
6,275,205	+				-0.4
6,275,205	+				-0.7
6,275,205	+				-0.4
6,275,205	+				-0.0
6,275,205	+				-0.4
6,275,205	+				+0.1
6,275,205	+				+1.0
6,275,205	+				+0.1
6,275,205	+				+0.5
6,275,205	+				+0.1
6,275,206	-				-1.2
6,275,206	-				+0.3
6,275,206	-				+0.2
6,275,206	-				+0.9
6,275,206	-				+0.1
6,275,206	-				-0.8
6,275,206	-				-0.5
6,275,206	-				+0.6
6,275,206	-				+2.0
6,275,207	+				+0.8
6,275,330	+		AO353_28840	0.17	-0.9
6,275,330	+		AO353_28840	0.17	-1.8
6,275,330	+		AO353_28840	0.17	-1.2
6,275,330	+		AO353_28840	0.17	-0.7
6,275,330	+		AO353_28840	0.17	+0.6
6,275,331	-		AO353_28840	0.17	-0.2
6,275,331	-		AO353_28840	0.17	-1.2
6,275,337	+		AO353_28840	0.18	-1.2
6,275,338	-		AO353_28840	0.18	+0.1
6,275,365	+		AO353_28840	0.21	+0.7
6,275,365	+		AO353_28840	0.21	+0.2
6,275,365	+		AO353_28840	0.21	-0.5
6,275,365	+		AO353_28840	0.21	-0.5
6,275,365	+		AO353_28840	0.21	-0.4
6,275,365	+		AO353_28840	0.21	-1.1
6,275,365	+		AO353_28840	0.21	-2.1
6,275,365	+		AO353_28840	0.21	-0.4
6,275,365	+		AO353_28840	0.21	-0.5
6,275,382	+		AO353_28840	0.22	+0.5
6,275,383	-		AO353_28840	0.22	+0.2
6,275,383	-		AO353_28840	0.22	-1.4
6,275,496	+		AO353_28840	0.33	+0.9
6,275,509	+		AO353_28840	0.34	+0.3
6,275,619	-		AO353_28840	0.44	-0.7
6,275,619	-		AO353_28840	0.44	+0.4
6,275,666	+		AO353_28840	0.49	+0.8
6,275,667	-		AO353_28840	0.49	+0.6
6,275,734	+		AO353_28840	0.55	+1.3
6,275,850	+		AO353_28840	0.66	-1.3
6,275,851	-		AO353_28840	0.66	-0.4
6,275,965	-		AO353_28840	0.77	-1.1
6,275,965	-		AO353_28840	0.77	-0.9
6,275,965	-		AO353_28840	0.77	-0.9
6,275,983	-		AO353_28840	0.78	-0.3
6,276,048	+		AO353_28840	0.84	-1.1
6,276,099	+		AO353_28840	0.89	+0.6
6,276,099	+		AO353_28840	0.89	-0.2
6,276,100	-		AO353_28840	0.89	-1.2
6,276,100	-		AO353_28840	0.89	-2.3
6,276,100	-		AO353_28840	0.89	-0.9
6,276,100	-		AO353_28840	0.89	-1.2
6,276,155	-				-1.0
6,276,155	-				-0.3
6,276,155	-				-1.2
6,276,251	+				-0.3
6,276,252	-				-0.5
6,276,252	-				-0.6
6,276,256	+				-0.0
6,276,257	-				-1.3
6,276,270	+				-0.2
6,276,270	+				-0.0
6,276,270	+				-1.2
6,276,271	-				-0.4
6,276,271	-				-0.0
6,276,271	-				+0.7
6,276,271	-				+0.6
6,276,271	-				-0.5
6,276,272	+				-1.0
6,276,273	-				-0.7
6,276,273	-				+1.2
6,276,334	+		AO353_28845	0.11	-0.2
6,276,334	+		AO353_28845	0.11	+0.7
6,276,344	+		AO353_28845	0.14	-1.3
6,276,344	+		AO353_28845	0.14	+0.0
6,276,345	-		AO353_28845	0.14	+0.6
6,276,347	+		AO353_28845	0.15	-1.4
6,276,347	+		AO353_28845	0.15	+0.1
6,276,348	-		AO353_28845	0.15	-0.7
6,276,348	-		AO353_28845	0.15	-0.1
6,276,348	-		AO353_28845	0.15	+1.1
6,276,348	-		AO353_28845	0.15	-1.3
6,276,348	-		AO353_28845	0.15	+0.3
6,276,385	+		AO353_28845	0.24	-2.3
6,276,385	+		AO353_28845	0.24	-0.2
6,276,385	+		AO353_28845	0.24	-0.2
6,276,386	-		AO353_28845	0.25	-0.6
6,276,386	-		AO353_28845	0.25	-1.3
6,276,386	-		AO353_28845	0.25	-0.5
6,276,386	-		AO353_28845	0.25	+0.1
6,276,386	-		AO353_28845	0.25	-0.2
6,276,386	-		AO353_28845	0.25	-0.5
6,276,392	+		AO353_28845	0.26	-0.6
6,276,392	+		AO353_28845	0.26	-0.6
6,276,392	+		AO353_28845	0.26	-0.7
6,276,392	+		AO353_28845	0.26	+0.2
6,276,392	+		AO353_28845	0.26	+1.0
6,276,393	-		AO353_28845	0.26	+0.8
6,276,393	-		AO353_28845	0.26	+0.8
6,276,393	-		AO353_28845	0.26	-1.0
6,276,393	-		AO353_28845	0.26	-1.1
6,276,402	-		AO353_28845	0.29	+2.2
6,276,434	-		AO353_28845	0.37	-0.9
6,276,475	-		AO353_28845	0.47	+0.2
6,276,529	+		AO353_28845	0.61	-0.3
6,276,534	+		AO353_28845	0.63	-0.7
6,276,534	+		AO353_28845	0.63	-0.7
6,276,535	-		AO353_28845	0.63	+0.6
6,276,535	-		AO353_28845	0.63	+1.3
6,276,597	-		AO353_28845	0.79	+0.1
6,276,777	+				-0.2
6,276,777	+				-1.6
6,276,777	+				-0.4
6,276,777	+				-1.1
6,276,822	+				+0.5
6,276,822	+				-1.2
6,276,822	+				+0.6
6,276,822	+				-1.1
6,276,822	+				+0.2
6,276,822	+				-1.0
6,276,822	+				-1.4
6,276,822	+				+1.0
6,276,822	+				-0.9
6,276,822	+				+1.6
6,276,822	+				-0.0
6,276,823	-				+0.4
6,276,823	-				+0.7
6,276,823	-				-0.2
6,276,823	-				+0.2
6,276,823	-				+1.0
6,276,823	-				-0.4
6,276,823	-				-0.1
6,276,823	-				-0.2
6,276,823	-				-0.6
6,276,825	+				-0.2
6,276,841	+				+0.6
6,276,842	-				+0.1
6,276,902	+				+0.9
6,276,902	+				+0.5
6,276,902	+				-0.6
6,276,903	-				-0.5
6,276,938	+		AO353_28850	0.12	+0.2
6,276,938	+		AO353_28850	0.12	+0.9
6,276,938	+		AO353_28850	0.12	+0.5
6,276,938	+		AO353_28850	0.12	-0.9
6,276,939	-		AO353_28850	0.12	+1.0
6,276,939	-		AO353_28850	0.12	-0.3
6,276,980	+		AO353_28850	0.17	+1.6
6,276,980	+		AO353_28850	0.17	+0.1
6,276,980	+		AO353_28850	0.17	+0.4
6,276,981	-		AO353_28850	0.17	+0.4
6,276,981	-		AO353_28850	0.17	+0.2
6,276,981	-		AO353_28850	0.17	-0.1