Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17620

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,882,190	+				+0.5
3,882,190	+				-0.5
3,882,190	+				-0.3
3,882,191	-				-0.3
3,882,191	-				-0.0
3,882,191	-				-1.9
3,882,214	-				-0.4
3,882,274	+				-0.7
3,882,274	+				-1.3
3,882,274	+				+1.7
3,882,274	+				+0.5
3,882,275	-				-0.7
3,882,275	-				-0.3
3,882,275	-				+0.5
3,882,275	-				+0.6
3,882,275	-				+0.1
3,882,276	+				-1.0
3,882,276	+				+1.0
3,882,276	+				+0.4
3,882,276	+				+0.4
3,882,276	+				-1.5
3,882,276	+				+0.6
3,882,276	+				-0.4
3,882,276	+				+0.3
3,882,276	+				-0.7
3,882,287	+				+0.3
3,882,287	+				-0.4
3,882,288	-				+0.9
3,882,644	-				+2.0
3,882,700	+				-1.9
3,882,700	+				+0.4
3,882,700	+				+0.5
3,882,700	+				-0.0
3,882,700	+				+0.1
3,882,700	+				+1.2
3,882,700	+				-1.4
3,882,700	+				+1.0
3,882,700	+				-0.9
3,882,700	+				-0.2
3,882,700	+				+0.1
3,882,700	+				-1.0
3,882,700	+				+0.3
3,882,701	-				+0.9
3,882,701	-				-0.2
3,882,701	-				-0.2
3,882,765	+		AO353_17615	0.13	+0.6
3,882,766	-		AO353_17615	0.14	-1.1
3,882,766	-		AO353_17615	0.14	+0.6
3,882,766	-		AO353_17615	0.14	-0.9
3,882,766	-		AO353_17615	0.14	-0.1
3,882,766	-		AO353_17615	0.14	+0.7
3,882,766	-		AO353_17615	0.14	+0.9
3,882,812	+		AO353_17615	0.24	-1.8
3,882,812	+		AO353_17615	0.24	-1.7
3,882,812	+		AO353_17615	0.24	-1.5
3,882,841	+		AO353_17615	0.30	-0.5
3,882,889	+		AO353_17615	0.41	+0.6
3,882,889	+		AO353_17615	0.41	-0.4
3,882,889	+		AO353_17615	0.41	-1.2
3,882,889	+		AO353_17615	0.41	-0.4
3,882,889	+		AO353_17615	0.41	+0.7
3,882,890	-		AO353_17615	0.41	+0.5
3,882,890	-		AO353_17615	0.41	+1.4
3,883,133	+				-1.6
3,883,133	+				+0.9
3,883,134	-				+0.3
3,883,134	-				-0.1
3,883,152	+				-2.9
3,883,152	+				-2.5
3,883,152	+				-2.4
3,883,152	+				-3.0
3,883,152	+				-1.2
3,883,152	+				-1.1
3,883,152	+				-1.5
3,883,153	-				-0.3
3,883,153	-				-2.0
3,883,196	+				-0.4
3,883,196	+				-1.4
3,883,196	+				-0.0
3,883,196	+				-1.2
3,883,196	+				-1.7
3,883,196	+				-2.0
3,883,196	+				-0.3
3,883,196	+				-1.5
3,883,196	+				-1.6
3,883,197	-				+0.3
3,883,197	-				-0.8
3,883,197	-				+0.3
3,883,197	-				-1.6
3,883,197	-				-1.0
3,883,197	-				-0.8
3,883,266	+				-1.0
3,883,298	+		AO353_17620	0.11	-2.1
3,883,298	+		AO353_17620	0.11	-0.3
3,883,298	+		AO353_17620	0.11	-1.5
3,883,298	+		AO353_17620	0.11	-0.6
3,883,298	+		AO353_17620	0.11	-0.2
3,883,298	+		AO353_17620	0.11	+0.1
3,883,298	+		AO353_17620	0.11	-1.3
3,883,298	+		AO353_17620	0.11	-1.0
3,883,299	-		AO353_17620	0.11	-0.4
3,883,299	-		AO353_17620	0.11	-1.4
3,883,299	-		AO353_17620	0.11	-1.2
3,883,299	-		AO353_17620	0.11	-0.1
3,883,299	-		AO353_17620	0.11	-1.0
3,883,299	-		AO353_17620	0.11	-2.6
3,883,299	-		AO353_17620	0.11	-0.2
3,883,307	+		AO353_17620	0.11	+0.4
3,883,307	+		AO353_17620	0.11	-1.5
3,883,307	+		AO353_17620	0.11	-2.7
3,883,307	+		AO353_17620	0.11	-1.3
3,883,307	+		AO353_17620	0.11	-2.3
3,883,308	-		AO353_17620	0.11	-1.4
3,883,308	-		AO353_17620	0.11	-0.2
3,883,308	-		AO353_17620	0.11	-2.7
3,883,308	-		AO353_17620	0.11	-1.8
3,883,308	-		AO353_17620	0.11	-1.1
3,883,308	-		AO353_17620	0.11	-1.7
3,883,308	-		AO353_17620	0.11	-3.1
3,883,308	-		AO353_17620	0.11	-1.1
3,883,308	-		AO353_17620	0.11	-1.1
3,883,308	-		AO353_17620	0.11	+0.1
3,883,308	-		AO353_17620	0.11	-1.5
3,883,308	-		AO353_17620	0.11	-1.8
3,883,308	-		AO353_17620	0.11	-1.8
3,883,308	-		AO353_17620	0.11	-3.7
3,883,308	-		AO353_17620	0.11	-0.9
3,883,368	+		AO353_17620	0.15	-2.0
3,883,369	-		AO353_17620	0.15	-1.7
3,883,369	-		AO353_17620	0.15	-1.9
3,883,391	+		AO353_17620	0.17	-1.8
3,883,391	+		AO353_17620	0.17	+1.0
3,883,391	+		AO353_17620	0.17	+0.1
3,883,391	+		AO353_17620	0.17	-1.9
3,883,391	+		AO353_17620	0.17	-1.3
3,883,391	+		AO353_17620	0.17	-1.2
3,883,391	+		AO353_17620	0.17	-0.5
3,883,392	-		AO353_17620	0.17	-3.0
3,883,392	-		AO353_17620	0.17	+0.5
3,883,392	-		AO353_17620	0.17	-1.8
3,883,392	-		AO353_17620	0.17	-0.2
3,883,547	+		AO353_17620	0.26	-0.4
3,883,547	+		AO353_17620	0.26	-0.8
3,883,548	-		AO353_17620	0.26	-1.3
3,883,548	-		AO353_17620	0.26	+0.1
3,883,628	+		AO353_17620	0.31	-0.7
3,883,628	+		AO353_17620	0.31	-1.4
3,883,629	-		AO353_17620	0.31	-1.2
3,883,647	+		AO353_17620	0.32	+0.3
3,883,647	+		AO353_17620	0.32	-0.1
3,883,683	+		AO353_17620	0.35	-0.9
3,883,683	+		AO353_17620	0.35	-0.6
3,883,683	+		AO353_17620	0.35	-0.6
3,883,683	+		AO353_17620	0.35	-1.7
3,883,683	+		AO353_17620	0.35	-1.0
3,883,683	+		AO353_17620	0.35	-0.5
3,883,683	+		AO353_17620	0.35	-0.5
3,883,683	+		AO353_17620	0.35	-2.0
3,883,683	+		AO353_17620	0.35	-0.7
3,883,683	+		AO353_17620	0.35	-1.0
3,883,683	+		AO353_17620	0.35	+1.4
3,883,683	+		AO353_17620	0.35	-0.8
3,883,683	+		AO353_17620	0.35	-0.9
3,883,683	+		AO353_17620	0.35	-1.2
3,883,683	+		AO353_17620	0.35	-0.7
3,883,683	+		AO353_17620	0.35	+1.0
3,883,683	+		AO353_17620	0.35	-1.9
3,883,684	-		AO353_17620	0.35	-1.8
3,883,684	-		AO353_17620	0.35	-0.3
3,883,684	-		AO353_17620	0.35	-1.1
3,883,684	-		AO353_17620	0.35	-1.8
3,883,684	-		AO353_17620	0.35	-0.3
3,883,684	-		AO353_17620	0.35	-0.5
3,883,684	-		AO353_17620	0.35	-2.0
3,883,684	-		AO353_17620	0.35	-2.0
3,883,684	-		AO353_17620	0.35	-1.2
3,883,684	-		AO353_17620	0.35	-4.2
3,883,684	-		AO353_17620	0.35	-2.1
3,883,684	-		AO353_17620	0.35	-1.8
3,883,684	-		AO353_17620	0.35	-0.1
3,883,684	-		AO353_17620	0.35	-1.3
3,883,684	-		AO353_17620	0.35	-1.3
3,883,684	-		AO353_17620	0.35	-1.9
3,883,684	-		AO353_17620	0.35	-1.0
3,883,684	-		AO353_17620	0.35	-0.8
3,883,685	+		AO353_17620	0.35	-0.2
3,883,685	+		AO353_17620	0.35	-1.9
3,883,685	+		AO353_17620	0.35	-3.1
3,883,686	-		AO353_17620	0.35	+0.1
3,883,686	-		AO353_17620	0.35	-2.8
3,883,686	-		AO353_17620	0.35	-0.7
3,883,686	-		AO353_17620	0.35	-1.9
3,883,686	-		AO353_17620	0.35	+1.7
3,883,686	-		AO353_17620	0.35	-1.0
3,883,754	+		AO353_17620	0.39	-1.8
3,883,754	+		AO353_17620	0.39	-0.0
3,883,755	-		AO353_17620	0.39	-1.0
3,883,755	-		AO353_17620	0.39	-1.5
3,883,755	-		AO353_17620	0.39	-0.8
3,883,755	-		AO353_17620	0.39	-0.6
3,883,755	-		AO353_17620	0.39	-1.0
3,883,755	-		AO353_17620	0.39	-1.5
3,883,755	-		AO353_17620	0.39	-0.0
3,883,811	+		AO353_17620	0.43	-1.2
3,883,811	+		AO353_17620	0.43	-0.6
3,883,812	-		AO353_17620	0.43	-3.9
3,883,812	-		AO353_17620	0.43	-1.1
3,883,995	-		AO353_17620	0.54	-2.3
3,884,102	+		AO353_17620	0.61	-1.9
3,884,102	+		AO353_17620	0.61	-0.3
3,884,102	+		AO353_17620	0.61	-0.0
3,884,102	+		AO353_17620	0.61	-0.2
3,884,102	+		AO353_17620	0.61	-1.2
3,884,103	-		AO353_17620	0.61	-1.0
3,884,103	-		AO353_17620	0.61	-0.5
3,884,103	-		AO353_17620	0.61	-0.0
3,884,103	-		AO353_17620	0.61	-0.0
3,884,103	-		AO353_17620	0.61	-0.1
3,884,103	-		AO353_17620	0.61	-1.7
3,884,108	+		AO353_17620	0.61	-1.7
3,884,108	+		AO353_17620	0.61	-1.9
3,884,108	+		AO353_17620	0.61	-1.0
3,884,108	+		AO353_17620	0.61	-1.9
3,884,108	+		AO353_17620	0.61	-1.1
3,884,108	+		AO353_17620	0.61	+0.7
3,884,108	+		AO353_17620	0.61	-0.3
3,884,108	+		AO353_17620	0.61	-0.3
3,884,108	+		AO353_17620	0.61	-1.3
3,884,109	-		AO353_17620	0.61	-1.7
3,884,109	-		AO353_17620	0.61	-1.2
3,884,109	-		AO353_17620	0.61	-1.0
3,884,109	-		AO353_17620	0.61	-1.7
3,884,109	-		AO353_17620	0.61	+0.1
3,884,109	-		AO353_17620	0.61	-0.3
3,884,156	+		AO353_17620	0.64	-1.2
3,884,156	+		AO353_17620	0.64	-1.8
3,884,156	+		AO353_17620	0.64	+1.3
3,884,156	+		AO353_17620	0.64	-0.3
3,884,157	-		AO353_17620	0.64	-1.2
3,884,157	-		AO353_17620	0.64	-0.8
3,884,157	-		AO353_17620	0.64	-0.8
3,884,157	-		AO353_17620	0.64	-0.6
3,884,157	-		AO353_17620	0.64	-1.1
3,884,157	-		AO353_17620	0.64	-0.6
3,884,157	-		AO353_17620	0.64	-1.7
3,884,157	-		AO353_17620	0.64	-1.0
3,884,157	-		AO353_17620	0.64	-1.7
3,884,157	-		AO353_17620	0.64	-1.2
3,884,157	-		AO353_17620	0.64	-2.0
3,884,157	-		AO353_17620	0.64	-0.6
3,884,157	-		AO353_17620	0.64	-0.6
3,884,160	+		AO353_17620	0.64	-0.3
3,884,160	+		AO353_17620	0.64	-2.6
3,884,161	-		AO353_17620	0.64	-1.6
3,884,161	-		AO353_17620	0.64	-1.1
3,884,192	+		AO353_17620	0.66	+0.1
3,884,192	+		AO353_17620	0.66	-0.3
3,884,192	+		AO353_17620	0.66	+0.3
3,884,192	+		AO353_17620	0.66	-0.2
3,884,193	-		AO353_17620	0.66	-0.0
3,884,310	+		AO353_17620	0.73	-2.1
3,884,310	+		AO353_17620	0.73	+1.0
3,884,311	-		AO353_17620	0.73	-1.7
3,884,311	-		AO353_17620	0.73	-2.7
3,884,311	-		AO353_17620	0.73	-0.5
3,884,311	-		AO353_17620	0.73	-1.6
3,884,311	-		AO353_17620	0.73	-1.0
3,884,311	-		AO353_17620	0.73	-1.2
3,884,349	+		AO353_17620	0.76	+0.4
3,884,349	+		AO353_17620	0.76	-1.7
3,884,349	+		AO353_17620	0.76	-0.6
3,884,350	-		AO353_17620	0.76	-1.8
3,884,441	-		AO353_17620	0.82	-0.3
3,884,491	-		AO353_17620	0.85	-0.5
3,884,606	+				-0.1
3,884,606	+				-1.4
3,884,607	-				-2.7
3,884,607	-				-1.5
3,884,607	-				-0.4
3,884,607	-				-1.3
3,884,823	+				-1.2
3,884,823	+				-0.1
3,884,823	+				+2.6
3,884,823	+				+0.8
3,884,824	-				-0.1
3,884,824	-				-0.8
3,884,824	-				+0.7
3,884,824	-				-1.9
3,884,824	-				-1.3
3,884,824	-				-0.6
3,884,824	-				-2.3
3,884,824	-				-0.2
3,884,824	-				-0.3
3,884,824	-				-1.6
3,884,824	-				-0.6
3,884,824	-				+0.1
3,884,824	-				-1.9
3,884,824	-				+0.6
3,884,824	-				-1.2
3,884,826	+				+2.1
3,884,826	+				+0.6
3,884,826	+				-0.6
3,884,826	+				-1.0
3,884,826	+				+0.1
3,884,826	+				+0.6
3,884,826	+				-0.9
3,884,826	+				+0.1
3,884,826	+				-0.4
3,884,826	+				-0.0
3,884,826	+				+0.1
3,884,826	+				+0.4
3,884,827	-				+0.1
3,884,827	-				+0.2
3,884,827	-				-1.4
3,884,827	-				-0.6
3,884,827	-				-0.6
3,884,827	-				-0.9
3,884,827	-				+1.0
3,884,827	-				-0.5
3,884,827	-				-0.1
3,884,827	-				-0.6
3,884,827	-				+0.4
3,884,827	-				+0.9
3,884,827	-				+0.6
3,884,828	+				-1.2
3,884,828	+				+0.5
3,884,828	+				-2.4
3,884,828	+				+0.2
3,884,828	+				+0.4
3,884,828	+				+0.8
3,884,828	+				-1.4
3,884,829	-				-0.3
3,884,829	-				-0.3
3,884,829	-				+0.0
3,884,829	-				-0.5
3,884,829	-				-1.6
3,884,829	-				-0.1
3,884,829	-				-0.1
3,884,830	+				+1.0
3,884,830	+				+0.1
3,884,830	+				+1.2
3,884,830	+				+1.0
3,884,831	-				-1.5
3,884,831	-				-0.1
3,884,831	-				+0.3
3,884,831	-				-0.1
3,884,831	-				-0.8
3,884,831	-				-1.9
3,884,852	-				-1.2
3,884,852	-				-0.3
3,884,861	+				+1.1
3,884,861	+				+0.1
3,884,862	-				-0.1
3,884,862	-				+0.4
3,884,862	-				-0.0
3,884,862	-				-0.4
3,884,879	+				-1.6
3,884,879	+				+2.3
3,884,880	-				-0.2
3,884,880	-				+1.7
3,884,880	-				+0.4
3,884,896	+				+0.2
3,884,897	-				+1.7
3,884,919	-				-1.4
3,884,919	-				-1.3
3,884,985	-				-0.2
3,884,990	-				-0.6
3,885,008	+				-0.2
3,885,044	+				+0.3
3,885,044	+				+0.2
3,885,045	-				+0.6
3,885,045	-				+0.2
3,885,045	-				-0.3
3,885,045	-				-0.3
3,885,045	-				+0.7
3,885,235	+				+0.6
3,885,235	+				-1.7
3,885,236	-				-2.2
3,885,236	-				+0.4
3,885,236	-				+0.7
3,885,257	+				+0.3
3,885,257	+				-1.3
3,885,258	-				-1.0
3,885,258	-				-0.2
3,885,261	+				+0.1
3,885,262	-				-1.4
3,885,262	-				+0.7
3,885,262	-				-2.0
3,885,262	-				+0.3
3,885,262	-				-0.3
3,885,262	-				-2.3
3,885,301	+				+1.6
3,885,370	+		AO353_17625	0.13	-0.7
3,885,370	+		AO353_17625	0.13	-1.4
3,885,370	+		AO353_17625	0.13	-0.1
3,885,370	+		AO353_17625	0.13	+0.4
3,885,371	-		AO353_17625	0.13	-0.8
3,885,371	-		AO353_17625	0.13	-1.6
3,885,371	-		AO353_17625	0.13	+1.0
3,885,371	-		AO353_17625	0.13	-2.0
3,885,381	+		AO353_17625	0.14	+0.3
3,885,381	+		AO353_17625	0.14	-2.2
3,885,381	+		AO353_17625	0.14	-0.9
3,885,381	+		AO353_17625	0.14	-2.4
3,885,382	-		AO353_17625	0.15	+1.3
3,885,382	-				-0.6
3,885,382	-		AO353_17625	0.15	+0.1
3,885,471	+		AO353_17625	0.30	+0.5
3,885,510	+		AO353_17625	0.37	-0.9
3,885,510	+		AO353_17625	0.37	-0.6
3,885,510	+		AO353_17625	0.37	-1.1
3,885,510	+		AO353_17625	0.37	-0.3
3,885,511	-		AO353_17625	0.37	-1.4
3,885,512	+		AO353_17625	0.37	-0.1
3,885,512	+		AO353_17625	0.37	-1.7
3,885,513	-		AO353_17625	0.37	+0.5
3,885,552	+		AO353_17625	0.44	+1.8
3,885,552	+		AO353_17625	0.44	-0.2
3,885,552	+		AO353_17625	0.44	-1.1
3,885,553	-		AO353_17625	0.44	-0.5
3,885,553	-		AO353_17625	0.44	-1.1
3,885,615	+		AO353_17625	0.55	-1.8
3,885,615	+		AO353_17625	0.55	+0.2
3,885,615	+		AO353_17625	0.55	-1.3
3,885,615	+		AO353_17625	0.55	-2.9
3,885,616	-		AO353_17625	0.55	+1.0
3,885,616	-		AO353_17625	0.55	+1.5
3,885,616	-		AO353_17625	0.55	-1.9
3,885,616	-		AO353_17625	0.55	+0.1
3,885,616	-		AO353_17625	0.55	-0.6
3,885,616	-		AO353_17625	0.55	+0.3
3,885,724	+		AO353_17625	0.73	+0.8
3,885,724	+		AO353_17625	0.73	-1.0
3,885,724	+		AO353_17625	0.73	-0.1
3,885,728	+		AO353_17625	0.74	+2.0
3,885,728	+		AO353_17625	0.74	-1.3
3,885,729	-		AO353_17625	0.74	-0.7
3,885,737	-		AO353_17625	0.76	-0.6