Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16210

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,596,423	+		AO353_16200	0.61	-1.8
3,596,423	+		AO353_16200	0.61	+0.6
3,596,423	+		AO353_16200	0.61	-0.1
3,596,424	-		AO353_16200	0.61	-1.3
3,596,424	-		AO353_16200	0.61	-0.8
3,596,424	-		AO353_16200	0.61	+0.3
3,596,482	+		AO353_16200	0.70	-0.7
3,596,482	+		AO353_16200	0.70	-0.0
3,596,482	+		AO353_16200	0.70	+0.2
3,596,482	+		AO353_16200	0.70	-0.0
3,596,482	+		AO353_16200	0.70	-0.1
3,596,482	+		AO353_16200	0.70	+0.9
3,596,483	-		AO353_16200	0.70	-0.4
3,596,483	-		AO353_16200	0.70	+0.4
3,596,483	-		AO353_16200	0.70	+0.2
3,596,533	+		AO353_16200	0.78	-2.2
3,596,604	-		AO353_16200	0.89	+1.1
3,596,620	-				-0.5
3,596,620	-				+0.4
3,596,740	+		AO353_16205	0.12	+0.5
3,596,740	+		AO353_16205	0.12	-0.0
3,596,740	+		AO353_16205	0.12	-0.2
3,596,740	+		AO353_16205	0.12	+0.3
3,596,740	+		AO353_16205	0.12	+0.3
3,596,741	-		AO353_16205	0.13	+1.1
3,596,741	-		AO353_16205	0.13	+0.6
3,596,741	-		AO353_16205	0.13	+0.1
3,596,741	-		AO353_16205	0.13	-0.7
3,596,871	-		AO353_16205	0.38	-0.8
3,596,938	+		AO353_16205	0.52	+1.1
3,596,938	+		AO353_16205	0.52	+0.0
3,596,938	+		AO353_16205	0.52	+0.4
3,596,938	+		AO353_16205	0.52	-0.3
3,596,938	+		AO353_16205	0.52	+0.0
3,596,938	+		AO353_16205	0.52	-0.5
3,596,938	+		AO353_16205	0.52	-0.7
3,596,938	+		AO353_16205	0.52	-0.0
3,596,938	+		AO353_16205	0.52	+0.9
3,596,938	+		AO353_16205	0.52	-0.7
3,596,938	+		AO353_16205	0.52	+0.3
3,596,938	+		AO353_16205	0.52	-0.0
3,596,938	+		AO353_16205	0.52	+0.6
3,596,938	+		AO353_16205	0.52	+0.5
3,596,938	+		AO353_16205	0.52	-0.4
3,596,938	+		AO353_16205	0.52	-0.8
3,596,938	+		AO353_16205	0.52	-1.6
3,596,938	+		AO353_16205	0.52	-0.4
3,596,938	+		AO353_16205	0.52	+0.7
3,596,938	+		AO353_16205	0.52	-1.4
3,596,938	+		AO353_16205	0.52	+1.3
3,596,938	+		AO353_16205	0.52	+1.2
3,596,938	+		AO353_16205	0.52	+0.3
3,596,938	+		AO353_16205	0.52	+0.1
3,596,938	+		AO353_16205	0.52	+0.6
3,596,938	+		AO353_16205	0.52	+0.1
3,596,938	+		AO353_16205	0.52	+0.3
3,596,938	+		AO353_16205	0.52	+0.3
3,596,938	+		AO353_16205	0.52	-0.9
3,596,938	+		AO353_16205	0.52	+1.1
3,596,938	+		AO353_16205	0.52	+1.7
3,596,938	+		AO353_16205	0.52	+1.1
3,596,938	+		AO353_16205	0.52	+1.9
3,596,938	+		AO353_16205	0.52	+0.6
3,596,938	+		AO353_16205	0.52	+1.1
3,596,938	+		AO353_16205	0.52	+0.4
3,596,938	+		AO353_16205	0.52	-1.2
3,596,938	+		AO353_16205	0.52	+0.2
3,596,938	+		AO353_16205	0.52	-0.4
3,596,939	-		AO353_16205	0.52	+0.2
3,596,939	-		AO353_16205	0.52	-0.3
3,596,939	-		AO353_16205	0.52	+0.6
3,596,939	-		AO353_16205	0.52	-0.9
3,596,939	-		AO353_16205	0.52	-0.8
3,596,939	-		AO353_16205	0.52	+0.4
3,596,939	-		AO353_16205	0.52	-0.7
3,596,939	-		AO353_16205	0.52	-0.6
3,596,939	-		AO353_16205	0.52	-1.7
3,596,939	-		AO353_16205	0.52	-1.3
3,596,939	-		AO353_16205	0.52	+0.4
3,596,939	-		AO353_16205	0.52	+1.4
3,596,939	-		AO353_16205	0.52	-0.0
3,596,939	-		AO353_16205	0.52	-1.4
3,596,939	-		AO353_16205	0.52	-1.6
3,596,939	-		AO353_16205	0.52	+0.7
3,596,939	-		AO353_16205	0.52	+1.4
3,596,939	-		AO353_16205	0.52	-1.7
3,596,939	-		AO353_16205	0.52	-0.8
3,596,939	-		AO353_16205	0.52	+0.1
3,596,939	-		AO353_16205	0.52	+0.1
3,596,939	-		AO353_16205	0.52	-0.2
3,596,939	-		AO353_16205	0.52	+1.1
3,596,939	-		AO353_16205	0.52	-2.0
3,596,939	-		AO353_16205	0.52	+1.1
3,596,939	-		AO353_16205	0.52	-0.8
3,597,076	+		AO353_16205	0.79	+1.0
3,597,076	+		AO353_16205	0.79	+0.5
3,597,077	-		AO353_16205	0.79	+0.6
3,597,077	-		AO353_16205	0.79	-0.7
3,597,077	-		AO353_16205	0.79	+0.3
3,597,139	+				-0.1
3,597,139	+				+1.2
3,597,139	+				-0.2
3,597,140	-				-0.1
3,597,140	-				+1.1
3,597,140	-				+1.0
3,597,140	-				+1.7
3,597,156	+				+0.4
3,597,156	+				-1.0
3,597,156	+				-1.2
3,597,156	+				-0.5
3,597,156	+				+0.6
3,597,156	+				+0.4
3,597,156	+				+0.1
3,597,156	+				+1.5
3,597,156	+				+0.5
3,597,156	+				-0.7
3,597,156	+				-2.8
3,597,157	-				+1.1
3,597,157	-				-0.3
3,597,157	-				-0.7
3,597,157	-				+0.3
3,597,157	-				-0.6
3,597,157	-				-0.0
3,597,157	-				-0.1
3,597,157	-				-0.1
3,597,157	-				-0.7
3,597,263	+				-0.2
3,597,263	+				+0.6
3,597,263	+				-0.9
3,597,263	+				-1.3
3,597,263	+				+0.1
3,597,263	+				-1.1
3,597,264	-				+0.8
3,597,264	-				+0.1
3,597,264	-				+0.7
3,597,264	-				+0.5
3,597,264	-				+0.8
3,597,265	+				-0.5
3,597,266	-				+0.1
3,597,284	-				-0.8
3,597,284	-				+0.4
3,597,284	-				+0.6
3,597,334	+				-0.3
3,597,334	+				-1.1
3,597,335	-				-0.0
3,597,335	-				-0.0
3,597,423	+				-2.7
3,597,423	+				-1.3
3,597,424	-				-2.8
3,597,459	+		AO353_16210	0.12	-1.3
3,597,459	+		AO353_16210	0.12	-2.2
3,597,459	+		AO353_16210	0.12	-1.6
3,597,459	+		AO353_16210	0.12	-4.2
3,597,460	-		AO353_16210	0.12	-2.1
3,597,460	-		AO353_16210	0.12	-1.0
3,597,460	-		AO353_16210	0.12	-3.4
3,597,460	-		AO353_16210	0.12	-0.7
3,597,460	-		AO353_16210	0.12	-3.1
3,597,460	-		AO353_16210	0.12	-2.8
3,597,461	+		AO353_16210	0.12	-2.6
3,597,461	+		AO353_16210	0.12	-3.1
3,597,462	-		AO353_16210	0.12	-3.0
3,597,462	-		AO353_16210	0.12	-2.4
3,597,462	-		AO353_16210	0.12	-1.2
3,597,473	+		AO353_16210	0.13	-0.7
3,597,473	+		AO353_16210	0.13	-4.0
3,597,473	+		AO353_16210	0.13	-2.9
3,597,474	-		AO353_16210	0.14	-1.3
3,597,474	-		AO353_16210	0.14	-2.7
3,597,507	+		AO353_16210	0.17	+0.1
3,597,508	-		AO353_16210	0.17	+0.7
3,597,508	-		AO353_16210	0.17	-3.0
3,597,508	-		AO353_16210	0.17	-0.2
3,597,508	-		AO353_16210	0.17	-3.6
3,597,508	-		AO353_16210	0.17	-1.7
3,597,522	+		AO353_16210	0.19	-1.3
3,597,522	+		AO353_16210	0.19	-3.3
3,597,522	+		AO353_16210	0.19	+0.6
3,597,522	+		AO353_16210	0.19	-2.7
3,597,522	+		AO353_16210	0.19	-3.4
3,597,522	+		AO353_16210	0.19	+0.0
3,597,522	+		AO353_16210	0.19	-2.7
3,597,523	-		AO353_16210	0.19	-2.2
3,597,523	-		AO353_16210	0.19	-3.0
3,597,523	-		AO353_16210	0.19	-4.8
3,597,523	-		AO353_16210	0.19	-1.8
3,597,607	+		AO353_16210	0.28	+0.1
3,597,607	+		AO353_16210	0.28	-2.0
3,597,608	-		AO353_16210	0.28	-3.0
3,597,685	-		AO353_16210	0.36	-1.2
3,597,726	+		AO353_16210	0.41	-3.3
3,597,727	-		AO353_16210	0.41	-4.4
3,597,727	-		AO353_16210	0.41	-4.3
3,597,727	-		AO353_16210	0.41	-2.9
3,597,777	+		AO353_16210	0.47	-1.4
3,597,777	+		AO353_16210	0.47	-1.9
3,597,777	+		AO353_16210	0.47	-2.7
3,597,777	+				-0.4
3,597,777	+		AO353_16210	0.47	-1.0
3,597,778	-		AO353_16210	0.47	-2.9
3,597,778	-		AO353_16210	0.47	-0.8
3,597,795	+		AO353_16210	0.48	-2.6
3,597,795	+		AO353_16210	0.48	-1.6
3,597,795	+		AO353_16210	0.48	-1.8
3,597,795	+		AO353_16210	0.48	-1.9
3,597,795	+		AO353_16210	0.48	-3.4
3,597,795	+		AO353_16210	0.48	-2.8
3,597,795	+		AO353_16210	0.48	-2.8
3,597,795	+		AO353_16210	0.48	-0.9
3,597,796	-		AO353_16210	0.49	-2.4
3,597,796	-		AO353_16210	0.49	-1.7
3,597,796	-		AO353_16210	0.49	-3.3
3,597,796	-		AO353_16210	0.49	-2.2
3,597,796	-		AO353_16210	0.49	-1.6
3,597,796	-		AO353_16210	0.49	-2.2
3,597,796	-		AO353_16210	0.49	-1.8
3,597,796	-		AO353_16210	0.49	-0.4
3,597,796	-		AO353_16210	0.49	-3.1
3,597,796	-		AO353_16210	0.49	-2.4
3,597,796	-		AO353_16210	0.49	-2.6
3,597,796	-		AO353_16210	0.49	-1.3
3,597,796	-		AO353_16210	0.49	-1.4
3,597,796	-		AO353_16210	0.49	-1.9
3,597,796	-		AO353_16210	0.49	-2.0
3,597,796	-		AO353_16210	0.49	-0.9
3,598,070	+		AO353_16210	0.78	-1.7
3,598,070	+		AO353_16210	0.78	-3.7
3,598,070	+		AO353_16210	0.78	-2.0
3,598,070	+		AO353_16210	0.78	-0.9
3,598,071	-		AO353_16210	0.79	-1.6
3,598,071	-		AO353_16210	0.79	-2.8
3,598,071	-		AO353_16210	0.79	+0.6
3,598,071	-		AO353_16210	0.79	-2.9
3,598,071	-				+2.1
3,598,071	-		AO353_16210	0.79	-2.1
3,598,071	-		AO353_16210	0.79	-2.7
3,598,344	+				+0.7
3,598,344	+				-1.2
3,598,345	-				-0.2
3,598,345	-				+0.6
3,598,357	+				+0.8
3,598,357	+				+0.4
3,598,358	-				+0.2
3,598,358	-				-0.8
3,598,358	-				+0.1
3,598,358	-				-0.1
3,598,448	+				-0.5
3,598,449	-				+1.0
3,598,572	-				-0.0
3,598,766	+		AO353_16215	0.17	-1.7
3,598,766	+		AO353_16215	0.17	+0.7
3,598,766	+		AO353_16215	0.17	+0.1
3,598,766	+		AO353_16215	0.17	+0.3
3,598,766	+		AO353_16215	0.17	-1.6
3,598,766	+		AO353_16215	0.17	+0.8
3,598,766	+		AO353_16215	0.17	-0.9
3,598,767	-		AO353_16215	0.17	-0.3
3,598,767	-		AO353_16215	0.17	+0.5
3,598,767	-		AO353_16215	0.17	-1.6
3,598,767	-		AO353_16215	0.17	-0.4
3,598,767	-		AO353_16215	0.17	+1.1
3,598,767	-		AO353_16215	0.17	-1.8
3,598,767	-		AO353_16215	0.17	-1.1
3,598,767	-		AO353_16215	0.17	+0.1
3,598,767	-		AO353_16215	0.17	-0.3
3,598,772	+		AO353_16215	0.17	-1.3
3,598,773	-		AO353_16215	0.17	-0.4
3,598,898	+		AO353_16215	0.23	-0.3
3,598,898	+		AO353_16215	0.23	-0.8
3,598,899	-		AO353_16215	0.23	+1.6
3,598,899	-		AO353_16215	0.23	-1.1
3,598,899	-		AO353_16215	0.23	+0.9
3,598,899	-		AO353_16215	0.23	+0.2
3,598,899	-		AO353_16215	0.23	-0.7
3,598,971	-		AO353_16215	0.26	+0.1
3,599,085	-		AO353_16215	0.31	-2.2
3,599,099	+		AO353_16215	0.31	+2.4
3,599,099	+		AO353_16215	0.31	-1.2
3,599,099	+		AO353_16215	0.31	+0.5
3,599,099	+		AO353_16215	0.31	-0.6
3,599,129	+		AO353_16215	0.33	-0.7
3,599,129	+		AO353_16215	0.33	-2.8
3,599,129	+		AO353_16215	0.33	-0.2
3,599,129	+		AO353_16215	0.33	-0.1
3,599,129	+		AO353_16215	0.33	-0.4
3,599,130	-		AO353_16215	0.33	+0.4
3,599,130	-		AO353_16215	0.33	+1.0
3,599,130	-		AO353_16215	0.33	-0.6
3,599,130	-		AO353_16215	0.33	+0.8
3,599,130	-		AO353_16215	0.33	+0.1
3,599,130	-		AO353_16215	0.33	-0.0
3,599,130	-		AO353_16215	0.33	-1.3
3,599,229	+		AO353_16215	0.37	+0.6
3,599,249	+		AO353_16215	0.38	-0.4
3,599,249	+		AO353_16215	0.38	-1.7
3,599,249	+		AO353_16215	0.38	+1.0
3,599,250	-		AO353_16215	0.38	+0.1
3,599,250	-		AO353_16215	0.38	+0.1
3,599,250	-		AO353_16215	0.38	+0.1