Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16055

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,550,275	-		AO353_16050	0.55	-0.6
3,550,275	-		AO353_16050	0.55	+0.7
3,550,275	-		AO353_16050	0.55	-0.4
3,550,275	-		AO353_16050	0.55	-0.0
3,550,275	-		AO353_16050	0.55	-0.3
3,550,418	+		AO353_16050	0.65	-0.7
3,550,419	-		AO353_16050	0.65	+0.7
3,550,622	+		AO353_16050	0.80	+0.6
3,550,623	-		AO353_16050	0.80	-0.0
3,550,682	+		AO353_16050	0.84	+0.0
3,550,683	-		AO353_16050	0.85	-0.6
3,550,831	+				+0.6
3,550,832	-				+0.3
3,550,832	-				-1.0
3,550,832	-				-1.4
3,550,896	+				-0.5
3,550,896	+				-0.1
3,550,896	+				-0.3
3,550,897	-				-0.2
3,550,897	-				+0.4
3,550,897	-				-1.0
3,550,919	+				-0.7
3,550,920	-				+0.8
3,550,978	+				-1.0
3,550,993	-				-0.1
3,551,146	+				-1.7
3,551,146	+				+0.0
3,551,146	+				+1.1
3,551,146	+				-1.4
3,551,147	-				+0.5
3,551,147	-				-2.1
3,551,147	-				+0.9
3,551,147	-				+1.5
3,551,147	-				+0.1
3,551,147	-				+0.4
3,551,153	-				+0.6
3,551,198	-				-0.3
3,551,216	+				+0.3
3,551,216	+				-0.5
3,551,216	+				-1.5
3,551,217	-				+0.3
3,551,295	-		AO353_16055	0.23	+0.8
3,551,313	+		AO353_16055	0.31	+0.7
3,551,313	+		AO353_16055	0.31	-1.9
3,551,314	-		AO353_16055	0.32	+0.6
3,551,314	-		AO353_16055	0.32	+0.8
3,551,314	-		AO353_16055	0.32	-1.5
3,551,373	-		AO353_16055	0.57	+0.8
3,551,436	+		AO353_16055	0.84	+0.4
3,551,436	+		AO353_16055	0.84	+1.3
3,551,469	+				-2.1
3,551,470	-				-0.7
3,551,470	-				+1.3
3,551,476	+				-1.2
3,551,476	+				-0.1
3,551,476	+				+0.9
3,551,476	+				-1.5
3,551,477	-				+0.9
3,551,477	-				+0.2
3,551,477	-				-0.0
3,551,477	-				-0.2
3,551,478	+				+1.9
3,551,478	+				-0.2
3,551,478	+				-0.6
3,551,478	+				-2.6
3,551,478	+				-0.2
3,551,478	+				-0.3
3,551,478	+				-1.8
3,551,478	+				-0.0
3,551,478	+				-1.4
3,551,478	+				-0.3
3,551,478	+				+0.1
3,551,478	+				+0.8
3,551,478	+				-0.6
3,551,478	+				+1.3
3,551,478	+				+0.3
3,551,478	+				-0.1
3,551,478	+				-0.1
3,551,478	+				-0.7
3,551,478	+				-0.3
3,551,478	+				-0.4
3,551,478	+				-1.9
3,551,478	+				+1.2
3,551,478	+				+0.4
3,551,478	+				+1.7
3,551,478	+				+0.2
3,551,478	+				-1.3
3,551,478	+				+0.6
3,551,478	+				-0.5
3,551,479	-				-1.0
3,551,479	-				-0.2
3,551,479	-				-0.2
3,551,479	-				-0.8
3,551,479	-				+0.2
3,551,479	-				-0.2
3,551,479	-				+0.5
3,551,479	-				+0.0
3,551,479	-				+0.3
3,551,479	-				+0.1
3,551,479	-				+0.3
3,551,479	-				-1.2
3,551,479	-				+0.6
3,551,479	-				+0.9
3,551,479	-				+0.7
3,551,479	-				+0.1
3,551,479	-				-0.7
3,551,479	-				+0.0
3,551,479	-				-0.2
3,551,479	-				-0.6
3,551,479	-				+0.0
3,551,479	-				-0.1
3,551,479	-				-1.9
3,551,479	-				+0.8
3,551,479	-				-0.9
3,551,479	-				+0.6
3,551,479	-				-0.4
3,551,479	-				+0.8
3,551,479	-				-0.2
3,551,479	-				-0.8
3,551,479	-				+0.3
3,551,479	-				-2.5
3,551,479	-				-1.8
3,551,479	-				-0.3
3,551,574	+				-1.8
3,551,574	+				-1.0
3,551,574	+				+1.0
3,551,574	+				+0.3
3,551,574	+				-0.0
3,551,574	+				-0.3
3,551,574	+				+0.5
3,551,575	-				-1.8
3,551,575	-				+1.8
3,551,575	-				-1.4
3,551,575	-				+0.9
3,551,586	+		AO353_16060	0.11	+0.3
3,551,587	-		AO353_16060	0.11	-1.0
3,551,634	+		AO353_16060	0.19	-1.3
3,551,634	+		AO353_16060	0.19	+1.1
3,551,634	+		AO353_16060	0.19	+1.2
3,551,635	-		AO353_16060	0.19	-1.2
3,551,635	-		AO353_16060	0.19	+0.1
3,551,635	-		AO353_16060	0.19	-0.9
3,551,635	-		AO353_16060	0.19	+0.1
3,551,643	+		AO353_16060	0.20	-0.4
3,551,643	+		AO353_16060	0.20	-0.2
3,551,643	+		AO353_16060	0.20	+0.4
3,551,643	+		AO353_16060	0.20	-0.4
3,551,644	-		AO353_16060	0.20	+1.2
3,551,644	-		AO353_16060	0.20	-0.3
3,551,644	-		AO353_16060	0.20	-0.3
3,551,644	-		AO353_16060	0.20	-0.8
3,551,644	-		AO353_16060	0.20	-1.0
3,551,648	+		AO353_16060	0.21	+0.1
3,551,649	-		AO353_16060	0.21	-0.3
3,551,649	-		AO353_16060	0.21	+0.4
3,551,663	+		AO353_16060	0.23	-0.3
3,551,663	+		AO353_16060	0.23	-0.4
3,551,663	+		AO353_16060	0.23	-1.0
3,551,664	-		AO353_16060	0.23	+1.3
3,551,664	-		AO353_16060	0.23	-0.4
3,551,721	-		AO353_16060	0.32	+0.6
3,551,721	-		AO353_16060	0.32	+0.8
3,551,769	-		AO353_16060	0.39	+1.0
3,551,787	+		AO353_16060	0.42	+0.3
3,551,787	+		AO353_16060	0.42	-1.0
3,551,788	-		AO353_16060	0.42	-1.7
3,551,788	-		AO353_16060	0.42	+1.6
3,551,788	-		AO353_16060	0.42	-1.0
3,551,883	+		AO353_16060	0.57	+0.7
3,551,883	+		AO353_16060	0.57	+0.4
3,551,883	+		AO353_16060	0.57	+0.8
3,551,883	+		AO353_16060	0.57	+1.2
3,551,883	+		AO353_16060	0.57	+0.2
3,551,883	+		AO353_16060	0.57	-1.4
3,551,883	+		AO353_16060	0.57	-1.0
3,551,883	+		AO353_16060	0.57	-0.0
3,551,884	-		AO353_16060	0.57	+0.1
3,551,884	-		AO353_16060	0.57	+0.3
3,551,884	-		AO353_16060	0.57	+0.1
3,551,946	+		AO353_16060	0.67	+0.3
3,551,947	-		AO353_16060	0.67	-0.3
3,551,958	+		AO353_16060	0.69	+0.1
3,551,958	+		AO353_16060	0.69	-0.0
3,551,958	+		AO353_16060	0.69	+1.0
3,551,958	+		AO353_16060	0.69	-0.7
3,551,958	+		AO353_16060	0.69	-0.3
3,551,959	-		AO353_16060	0.69	+1.5
3,551,959	-		AO353_16060	0.69	+0.8
3,551,959	-		AO353_16060	0.69	-1.5
3,551,959	-		AO353_16060	0.69	+2.2
3,551,959	-		AO353_16060	0.69	+0.8
3,551,959	-		AO353_16060	0.69	+0.1
3,551,959	-		AO353_16060	0.69	-1.3
3,551,969	+		AO353_16060	0.70	-0.1
3,551,969	+		AO353_16060	0.70	-1.0
3,551,969	+		AO353_16060	0.70	+0.0
3,551,970	-		AO353_16060	0.70	-0.1
3,551,970	-		AO353_16060	0.70	+0.4
3,551,970	-		AO353_16060	0.70	+0.9
3,551,970	-		AO353_16060	0.70	-0.4
3,552,000	+		AO353_16060	0.75	-0.2
3,552,148	+				+1.2
3,552,148	+				-2.0
3,552,149	-				-0.4
3,552,149	-				+0.7
3,552,149	-				-0.5
3,552,149	-				+1.4
3,552,149	-				-1.5
3,552,149	-				-0.1
3,552,212	+				+1.7
3,552,268	+				+0.9
3,552,268	+				+0.5
3,552,269	-				-0.0
3,552,269	-				-1.5
3,552,269	-				-0.7
3,552,269	-				-0.6
3,552,316	-				+0.7
3,552,316	-				-0.1