Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13440

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
2,978,323	+		AO353_13435	0.26	-1.8
2,978,324	-		AO353_13435	0.26	-1.6
2,978,412	+		AO353_13435	0.38	-1.5
2,978,412	+		AO353_13435	0.38	-1.3
2,978,413	-		AO353_13435	0.38	+1.2
2,978,416	+		AO353_13435	0.38	-0.6
2,978,416	+		AO353_13435	0.38	-0.1
2,978,416	+		AO353_13435	0.38	+0.3
2,978,417	-		AO353_13435	0.38	-0.1
2,978,417	-		AO353_13435	0.38	-1.1
2,978,510	+		AO353_13435	0.51	+0.3
2,978,510	+		AO353_13435	0.51	-0.7
2,978,510	+		AO353_13435	0.51	+2.2
2,978,523	-		AO353_13435	0.53	+0.2
2,978,558	+		AO353_13435	0.57	-1.0
2,978,558	+		AO353_13435	0.57	-0.5
2,978,558	+		AO353_13435	0.57	+0.4
2,978,558	+		AO353_13435	0.57	-0.9
2,978,558	+		AO353_13435	0.57	+1.9
2,978,558	+		AO353_13435	0.57	-0.3
2,978,558	+		AO353_13435	0.57	-0.2
2,978,559	-		AO353_13435	0.57	-0.6
2,978,560	+		AO353_13435	0.57	-2.6
2,978,561	-		AO353_13435	0.58	+0.6
2,978,561	-		AO353_13435	0.58	-0.7
2,978,619	+		AO353_13435	0.65	-0.2
2,978,620	-		AO353_13435	0.65	-2.3
2,978,620	-		AO353_13435	0.65	-0.3
2,978,655	+		AO353_13435	0.70	-0.1
2,978,656	-		AO353_13435	0.70	-0.8
2,978,681	+		AO353_13435	0.73	-0.6
2,978,685	-		AO353_13435	0.74	-0.6
2,978,736	+		AO353_13435	0.81	-0.9
2,978,764	+		AO353_13435	0.84	+0.1
2,978,818	+				+0.9
2,978,819	-				-0.6
2,978,881	+				-0.5
2,978,881	+				-1.0
2,978,881	+				-0.5
2,978,882	-				+1.0
2,978,882	-				-0.5
2,978,885	+				+0.4
2,978,933	-				-0.4
2,979,086	-				+0.1
2,979,099	+				-1.1
2,979,101	+				+0.6
2,979,101	+				+1.9
2,979,129	-				+0.0
2,979,132	+				-0.6
2,979,132	+				+1.2
2,979,133	-				-1.5
2,979,133	-				+0.1
2,979,133	-				+0.6
2,979,133	-				+0.3
2,979,133	-				+0.4
2,979,133	-				+0.7
2,979,156	+				+1.5
2,979,175	+				-0.1
2,979,175	+				-0.8
2,979,175	+				-0.0
2,979,175	+				-0.2
2,979,175	+				+0.2
2,979,175	+				-1.0
2,979,175	+				-1.1
2,979,175	+				+0.0
2,979,175	+				-0.5
2,979,175	+				+0.6
2,979,175	+				+0.4
2,979,175	+				-1.0
2,979,176	-				-0.8
2,979,251	+				+0.9
2,979,251	+				+0.4
2,979,251	+				+0.7
2,979,336	-				-0.6
2,979,336	-				+2.6
2,979,351	+				-0.9
2,979,351	+				-0.5
2,979,351	+				-1.0
2,979,352	-				+0.0
2,979,352	-				-0.0
2,979,352	-				-0.4
2,979,460	+		AO353_13440	0.21	+0.0
2,979,461	-		AO353_13440	0.21	+0.3
2,979,478	+		AO353_13440	0.23	+0.4
2,979,478	+		AO353_13440	0.23	+0.0
2,979,478	+		AO353_13440	0.23	+1.1
2,979,478	+		AO353_13440	0.23	+0.8
2,979,478	+		AO353_13440	0.23	-0.9
2,979,478	+		AO353_13440	0.23	-0.6
2,979,479	-		AO353_13440	0.23	+0.7
2,979,574	+		AO353_13440	0.33	-1.0
2,979,627	+		AO353_13440	0.39	+1.0
2,979,627	+		AO353_13440	0.39	-0.7
2,979,627	+		AO353_13440	0.39	-0.1
2,979,628	-		AO353_13440	0.40	-2.3
2,979,628	-		AO353_13440	0.40	-0.4
2,979,873	+		AO353_13440	0.67	+1.4
2,979,873	+		AO353_13440	0.67	-0.5
2,979,874	-		AO353_13440	0.67	-0.7
2,979,876	+		AO353_13440	0.67	+0.6
2,979,876	+		AO353_13440	0.67	-0.7
2,979,876	+		AO353_13440	0.67	-2.6
2,979,876	+		AO353_13440	0.67	-0.8
2,979,876	+		AO353_13440	0.67	+0.2
2,979,877	-		AO353_13440	0.67	+0.1
2,979,877	-		AO353_13440	0.67	+0.5
2,979,877	-		AO353_13440	0.67	+0.8
2,979,877	-		AO353_13440	0.67	+0.6
2,979,877	-		AO353_13440	0.67	+0.4
2,979,877	-		AO353_13440	0.67	+0.0
2,979,877	-		AO353_13440	0.67	+1.1
2,979,938	+		AO353_13440	0.74	+1.4
2,980,001	+		AO353_13440	0.81	+0.5
2,980,001	+		AO353_13440	0.81	+0.4
2,980,002	-		AO353_13440	0.81	+1.0
2,980,002	-		AO353_13440	0.81	+1.0
2,980,014	+		AO353_13440	0.83	-1.2
2,980,015	-		AO353_13440	0.83	+0.5
2,980,015	-		AO353_13440	0.83	+0.0
2,980,015	-		AO353_13440	0.83	+0.0
2,980,051	-		AO353_13440	0.87	+0.2
2,980,344	+				-0.6
2,980,345	-				+1.4
2,980,345	-				+0.3
2,980,345	-				-1.5
2,980,351	+				+2.1
2,980,351	+				-1.7
2,980,351	+				-0.4
2,980,351	+				+0.7
2,980,352	-				-0.5
2,980,352	-				+0.4
2,980,352	-				-1.6
2,980,352	-				+0.8
2,980,352	-				-0.1
2,980,504	+		AO353_13445	0.26	-0.4
2,980,504	+		AO353_13445	0.26	-0.4
2,980,504	+		AO353_13445	0.26	-0.3
2,980,505	-		AO353_13445	0.27	-1.6
2,980,505	-		AO353_13445	0.27	+0.0
2,980,600	+		AO353_13445	0.37	-0.0
2,980,600	+		AO353_13445	0.37	+0.6
2,980,600	+		AO353_13445	0.37	+0.4
2,980,600	+		AO353_13445	0.37	+0.8
2,980,600	+		AO353_13445	0.37	-1.4
2,980,601	-		AO353_13445	0.38	-0.5
2,980,601	-		AO353_13445	0.38	-1.8
2,980,601	-		AO353_13445	0.38	+0.1
2,980,601	-		AO353_13445	0.38	-0.3
2,980,601	-		AO353_13445	0.38	-0.1
2,980,654	+		AO353_13445	0.44	-1.6
2,980,654	+		AO353_13445	0.44	+0.5
2,980,655	-		AO353_13445	0.44	+0.1
2,980,655	-		AO353_13445	0.44	-0.6
2,980,663	+		AO353_13445	0.45	+0.0
2,980,663	+		AO353_13445	0.45	+0.5
2,980,903	+		AO353_13445	0.72	-0.3
2,980,904	-		AO353_13445	0.72	+0.2
2,980,904	-		AO353_13445	0.72	-0.5
2,980,919	-		AO353_13445	0.74	+2.0
2,980,919	-		AO353_13445	0.74	+1.3
2,980,989	+		AO353_13445	0.82	-0.4
2,980,989	+		AO353_13445	0.82	+0.0
2,980,989	+		AO353_13445	0.82	+1.2
2,980,989	+		AO353_13445	0.82	+0.1
2,980,989	+		AO353_13445	0.82	+1.1
2,980,989	+		AO353_13445	0.82	+0.2
2,980,989	+		AO353_13445	0.82	+0.0
2,980,989	+		AO353_13445	0.82	+0.8
2,980,989	+		AO353_13445	0.82	+1.9
2,980,989	+		AO353_13445	0.82	-0.5
2,980,990	-		AO353_13445	0.82	+0.8
2,980,990	-		AO353_13445	0.82	-0.2
2,980,990	-		AO353_13445	0.82	+0.2
2,980,990	-		AO353_13445	0.82	+0.2
2,980,990	-		AO353_13445	0.82	-0.0
2,980,990	-				-0.5
2,981,045	-		AO353_13445	0.88	-2.3
2,981,045	-		AO353_13445	0.88	+0.4
2,981,045	-		AO353_13445	0.88	+0.7
2,981,134	+				-2.2
2,981,140	+				+0.4
2,981,140	+				+1.4
2,981,140	+				-1.3
2,981,140	+				-1.0
2,981,140	+				-0.7
2,981,140	+				+1.4
2,981,140	+				+0.9
2,981,140	+				+0.5
2,981,140	+				-0.2
2,981,140	+				+0.3
2,981,140	+				-1.8
2,981,141	-				+0.7
2,981,141	-				+0.7
2,981,141	-				-1.4
2,981,141	-				+0.1
2,981,141	-				-0.6
2,981,141	-				-0.5
2,981,141	-				+1.7
2,981,141	-				-0.9