Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10040

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
2,197,130	+		AO353_10035	0.60	-1.4
2,197,130	+		AO353_10035	0.60	-2.5
2,197,130	+		AO353_10035	0.60	-2.8
2,197,130	+		AO353_10035	0.60	-1.8
2,197,131	-		AO353_10035	0.61	-1.8
2,197,131	-		AO353_10035	0.61	-2.7
2,197,131	-		AO353_10035	0.61	+0.2
2,197,131	-		AO353_10035	0.61	-2.9
2,197,184	+		AO353_10035	0.66	-1.8
2,197,184	+		AO353_10035	0.66	-1.8
2,197,184	+				+0.3
2,197,185	-		AO353_10035	0.66	+0.5
2,197,185	-		AO353_10035	0.66	-3.3
2,197,185	-		AO353_10035	0.66	-3.0
2,197,185	-		AO353_10035	0.66	-1.5
2,197,260	+		AO353_10035	0.74	-2.4
2,197,282	-		AO353_10035	0.76	-2.7
2,197,358	+		AO353_10035	0.84	-1.8
2,197,359	-		AO353_10035	0.84	-3.1
2,197,359	-		AO353_10035	0.84	-3.4
2,197,504	+				+0.2
2,197,504	+				+0.3
2,197,504	+				-1.0
2,197,504	+				-0.4
2,197,504	+				+0.7
2,197,504	+				-1.0
2,197,504	+				-0.7
2,197,504	+				-0.1
2,197,505	-				-1.2
2,197,505	-				-1.6
2,197,505	-				-2.8
2,197,505	-				-0.3
2,197,505	-				-1.3
2,197,505	-				-0.7
2,197,505	-				-0.3
2,197,505	-				-0.8
2,197,505	-				+1.0
2,197,648	+				+0.1
2,197,649	-				-1.7
2,197,698	+				+0.6
2,197,698	+				-0.8
2,197,698	+				+0.2
2,197,698	+				-0.9
2,197,698	+				+0.9
2,197,698	+				-0.2
2,197,699	-				-0.1
2,197,734	+				+0.0
2,197,735	-				+0.5
2,197,735	-				+0.0
2,197,735	-				+0.8
2,197,885	+				+0.0
2,197,913	+				-0.9
2,197,913	+				-1.0
2,197,914	-				-0.2
2,198,059	+		AO353_10040	0.19	-0.3
2,198,059	+		AO353_10040	0.19	-2.1
2,198,060	-		AO353_10040	0.19	-1.6
2,198,060	-		AO353_10040	0.19	-0.8
2,198,060	-		AO353_10040	0.19	-2.2
2,198,060	-		AO353_10040	0.19	-0.1
2,198,060	-		AO353_10040	0.19	+0.0
2,198,061	+		AO353_10040	0.19	+0.3
2,198,061	+		AO353_10040	0.19	+0.8
2,198,061	+		AO353_10040	0.19	-1.0
2,198,061	+		AO353_10040	0.19	-1.6
2,198,061	+		AO353_10040	0.19	-2.3
2,198,061	+		AO353_10040	0.19	-0.6
2,198,061	+		AO353_10040	0.19	-1.0
2,198,061	+		AO353_10040	0.19	-0.6
2,198,061	+		AO353_10040	0.19	-0.6
2,198,061	+		AO353_10040	0.19	-0.4
2,198,061	+		AO353_10040	0.19	-2.0
2,198,061	+		AO353_10040	0.19	-0.5
2,198,061	+		AO353_10040	0.19	+0.7
2,198,061	+		AO353_10040	0.19	-1.3
2,198,061	+		AO353_10040	0.19	+0.2
2,198,061	+		AO353_10040	0.19	-1.1
2,198,061	+		AO353_10040	0.19	-2.0
2,198,061	+		AO353_10040	0.19	+1.0
2,198,061	+		AO353_10040	0.19	+0.3
2,198,061	+		AO353_10040	0.19	-2.4
2,198,061	+		AO353_10040	0.19	-0.6
2,198,061	+		AO353_10040	0.19	-0.3
2,198,062	-		AO353_10040	0.19	-1.1
2,198,062	-		AO353_10040	0.19	-0.7
2,198,062	-		AO353_10040	0.19	-2.1
2,198,062	-		AO353_10040	0.19	+1.6
2,198,062	-		AO353_10040	0.19	-1.0
2,198,062	-		AO353_10040	0.19	-0.4
2,198,062	-		AO353_10040	0.19	-0.1
2,198,062	-		AO353_10040	0.19	+1.2
2,198,062	-		AO353_10040	0.19	-0.2
2,198,062	-		AO353_10040	0.19	-2.0
2,198,062	-		AO353_10040	0.19	-2.5
2,198,062	-		AO353_10040	0.19	-0.6
2,198,062	-		AO353_10040	0.19	-1.0
2,198,062	-		AO353_10040	0.19	+0.6
2,198,062	-		AO353_10040	0.19	-1.5
2,198,062	-		AO353_10040	0.19	+1.0
2,198,062	-		AO353_10040	0.19	-0.7
2,198,062	-		AO353_10040	0.19	-1.5
2,198,062	-		AO353_10040	0.19	+0.7
2,198,062	-		AO353_10040	0.19	-1.2
2,198,062	-		AO353_10040	0.19	-3.0
2,198,062	-		AO353_10040	0.19	+0.3
2,198,062	-		AO353_10040	0.19	-1.0
2,198,062	-		AO353_10040	0.19	+0.9
2,198,317	+		AO353_10040	0.49	+0.2
2,198,317	+		AO353_10040	0.49	-0.2
2,198,318	-		AO353_10040	0.49	+1.0
2,198,318	-		AO353_10040	0.49	-0.6
2,198,361	+		AO353_10040	0.54	-1.5
2,198,361	+		AO353_10040	0.54	-1.1
2,198,362	-		AO353_10040	0.54	-0.3
2,198,362	-		AO353_10040	0.54	-0.8
2,198,362	-		AO353_10040	0.54	-2.1
2,198,362	-		AO353_10040	0.54	-0.6
2,198,481	+		AO353_10040	0.68	-1.4
2,198,481	+		AO353_10040	0.68	-1.5
2,198,481	+		AO353_10040	0.68	-1.2
2,198,721	-				-0.2
2,198,721	-				-0.2
2,198,780	-				+2.6
2,198,800	+				-0.7
2,198,800	+				+1.3
2,198,801	-				+0.5
2,198,815	+				-1.2
2,198,817	+				+0.2
2,198,892	-				-2.0
2,198,900	+				+0.7
2,198,900	+				+0.0
2,198,900	+				+2.3
2,198,900	+				-0.5
2,198,901	-				+0.3
2,198,901	-				+0.3
2,198,901	-				-0.1
2,198,901	-				-0.3
2,198,901	-				+0.9
2,198,901	-				+0.3
2,198,901	-				-1.4
2,198,901	-				-0.4
2,198,901	-				+0.0
2,198,901	-				-0.7
2,198,901	-				-1.8
2,198,901	-				-1.1
2,199,064	+				-0.4
2,199,065	-				+1.6
2,199,103	+				-1.4
2,199,178	+				-2.6
2,199,201	-				-0.9
2,199,227	+		AO353_10045	0.13	-0.2
2,199,227	+		AO353_10045	0.13	-0.7
2,199,255	+		AO353_10045	0.22	+0.2
2,199,255	+		AO353_10045	0.22	-0.6
2,199,287	+		AO353_10045	0.32	-0.8
2,199,287	+		AO353_10045	0.32	-0.5
2,199,287	+		AO353_10045	0.32	+0.5
2,199,287	+		AO353_10045	0.32	+0.8
2,199,288	-		AO353_10045	0.32	+0.4
2,199,289	+		AO353_10045	0.33	-1.4
2,199,289	+		AO353_10045	0.33	+0.4
2,199,290	-		AO353_10045	0.33	+0.3
2,199,372	-		AO353_10045	0.59	+0.4
2,199,405	+		AO353_10045	0.70	-0.0
2,199,405	+		AO353_10045	0.70	-1.6
2,199,406	-		AO353_10045	0.70	-1.1
2,199,408	-		AO353_10045	0.70	-1.3
2,199,408	-		AO353_10045	0.70	+1.2
2,199,474	-				-0.5
2,199,476	+				-0.8
2,199,476	+				+0.4
2,199,503	+				-0.4
2,199,515	+				-0.2
2,199,516	-				+0.8
2,199,516	-				-0.3
2,199,553	+				+0.8
2,199,554	-				-1.0
2,199,611	+				-0.1
2,199,611	+				-0.7
2,199,612	-				+0.4
2,199,612	-				+0.4
2,199,612	-				+0.7
2,199,658	-				+2.2