Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06095

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
1,359,126	+		AO353_06090	0.25	-0.3
1,359,127	-		AO353_06090	0.26	+0.3
1,359,145	+		AO353_06090	0.27	-1.7
1,359,145	+		AO353_06090	0.27	+0.1
1,359,146	-		AO353_06090	0.28	+0.1
1,359,146	-		AO353_06090	0.28	+0.6
1,359,146	-		AO353_06090	0.28	-1.3
1,359,146	-		AO353_06090	0.28	-0.3
1,359,146	-		AO353_06090	0.28	-0.1
1,359,146	-		AO353_06090	0.28	+1.9
1,359,146	-		AO353_06090	0.28	+1.2
1,359,148	+		AO353_06090	0.28	-1.4
1,359,148	+		AO353_06090	0.28	-1.0
1,359,148	+		AO353_06090	0.28	-1.5
1,359,148	+		AO353_06090	0.28	-1.4
1,359,148	+		AO353_06090	0.28	-1.2
1,359,148	+		AO353_06090	0.28	-1.5
1,359,148	+		AO353_06090	0.28	+0.4
1,359,148	+		AO353_06090	0.28	-1.3
1,359,149	-		AO353_06090	0.28	+0.6
1,359,149	-		AO353_06090	0.28	-1.4
1,359,149	-		AO353_06090	0.28	-0.3
1,359,149	-		AO353_06090	0.28	+0.6
1,359,149	-		AO353_06090	0.28	+0.4
1,359,149	-		AO353_06090	0.28	-0.7
1,359,411	+		AO353_06090	0.56	-0.7
1,359,423	+		AO353_06090	0.58	-0.8
1,359,424	-		AO353_06090	0.58	-0.1
1,359,439	+		AO353_06090	0.59	+0.5
1,359,444	+		AO353_06090	0.60	-0.3
1,359,444	+		AO353_06090	0.60	+1.5
1,359,444	+		AO353_06090	0.60	-1.7
1,359,445	-		AO353_06090	0.60	-0.3
1,359,445	-		AO353_06090	0.60	-0.1
1,359,445	-		AO353_06090	0.60	-0.5
1,359,445	-		AO353_06090	0.60	-1.2
1,359,445	-		AO353_06090	0.60	+0.4
1,359,471	+		AO353_06090	0.63	+1.5
1,359,471	+		AO353_06090	0.63	-1.3
1,359,471	+		AO353_06090	0.63	-0.7
1,359,472	-		AO353_06090	0.63	+0.4
1,359,472	-		AO353_06090	0.63	-0.3
1,359,472	-		AO353_06090	0.63	+0.5
1,359,483	-		AO353_06090	0.64	+0.6
1,359,509	+		AO353_06090	0.67	+0.1
1,359,510	-		AO353_06090	0.67	-1.9
1,359,564	+		AO353_06090	0.73	-0.1
1,359,636	+		AO353_06090	0.81	-2.4
1,359,637	-		AO353_06090	0.81	-0.7
1,359,637	-		AO353_06090	0.81	+0.5
1,359,637	-		AO353_06090	0.81	-0.2
1,359,637	-		AO353_06090	0.81	-0.8
1,359,637	-		AO353_06090	0.81	-0.9
1,359,646	-		AO353_06090	0.82	+1.0
1,359,660	+		AO353_06090	0.83	+0.4
1,359,720	+		AO353_06090	0.90	+0.7
1,359,720	+		AO353_06090	0.90	+0.1
1,359,720	+		AO353_06090	0.90	-0.1
1,359,720	+		AO353_06090	0.90	-0.2
1,359,720	+		AO353_06090	0.90	-0.6
1,359,721	-				+0.9
1,359,721	-				-2.3
1,359,844	-				-0.6
1,359,844	-				+0.9
1,359,951	+				+1.0
1,359,951	+				-1.5
1,359,952	-				+0.2
1,359,952	-				-0.5
1,359,952	-				-2.0
1,359,952	-				+0.9
1,360,093	+		AO353_06095	0.26	-1.9
1,360,093	+		AO353_06095	0.26	+0.5
1,360,093	+		AO353_06095	0.26	-0.7
1,360,093	+		AO353_06095	0.26	+0.9
1,360,094	-		AO353_06095	0.26	-1.1
1,360,094	-		AO353_06095	0.26	-0.3
1,360,094	-		AO353_06095	0.26	+0.2
1,360,094	-		AO353_06095	0.26	+1.5
1,360,094	-		AO353_06095	0.26	-1.5
1,360,094	-		AO353_06095	0.26	-0.4
1,360,094	-		AO353_06095	0.26	+1.0
1,360,094	-		AO353_06095	0.26	-2.1
1,360,096	+		AO353_06095	0.27	-2.5
1,360,096	+		AO353_06095	0.27	-1.5
1,360,096	+		AO353_06095	0.27	+0.4
1,360,096	+		AO353_06095	0.27	-0.7
1,360,096	+		AO353_06095	0.27	+1.9
1,360,096	+		AO353_06095	0.27	-1.0
1,360,096	+		AO353_06095	0.27	+0.9
1,360,096	+		AO353_06095	0.27	-0.8
1,360,097	-		AO353_06095	0.27	-1.1
1,360,097	-		AO353_06095	0.27	-0.4
1,360,097	-		AO353_06095	0.27	-0.6
1,360,097	-		AO353_06095	0.27	+0.3
1,360,097	-		AO353_06095	0.27	-0.7
1,360,097	-		AO353_06095	0.27	-1.7
1,360,097	-		AO353_06095	0.27	+1.7
1,360,097	-		AO353_06095	0.27	+0.9
1,360,097	-		AO353_06095	0.27	-0.1
1,360,097	-		AO353_06095	0.27	-0.9
1,360,097	-		AO353_06095	0.27	-0.1
1,360,097	-		AO353_06095	0.27	-0.5
1,360,120	+		AO353_06095	0.30	-0.2
1,360,120	+		AO353_06095	0.30	-0.8
1,360,120	+		AO353_06095	0.30	-0.0
1,360,120	+		AO353_06095	0.30	-0.3
1,360,120	+		AO353_06095	0.30	-0.5
1,360,120	+		AO353_06095	0.30	+0.1
1,360,121	-		AO353_06095	0.31	+0.4
1,360,121	-		AO353_06095	0.31	-1.5
1,360,121	-		AO353_06095	0.31	-0.5
1,360,121	-		AO353_06095	0.31	-1.6
1,360,121	-		AO353_06095	0.31	+0.9
1,360,121	-		AO353_06095	0.31	-1.7
1,360,167	+		AO353_06095	0.38	+0.8
1,360,168	-		AO353_06095	0.38	+0.9
1,360,168	-		AO353_06095	0.38	-1.5
1,360,168	-		AO353_06095	0.38	+0.3
1,360,176	+		AO353_06095	0.39	+0.9
1,360,176	+		AO353_06095	0.39	+0.6
1,360,214	-		AO353_06095	0.45	-1.0
1,360,309	+		AO353_06095	0.59	-1.1
1,360,309	+		AO353_06095	0.59	-0.1
1,360,394	+		AO353_06095	0.73	-0.0
1,360,394	+		AO353_06095	0.73	-1.2
1,360,394	+		AO353_06095	0.73	-1.2
1,360,395	-		AO353_06095	0.73	-0.8
1,360,395	-		AO353_06095	0.73	-1.0
1,360,395	-		AO353_06095	0.73	-1.3
1,360,442	-		AO353_06095	0.80	+1.6
1,360,442	-		AO353_06095	0.80	-0.8
1,360,483	-		AO353_06095	0.86	-0.2
1,360,522	-				-0.4
1,360,522	-				-0.0
1,360,522	-				-0.9
1,360,534	-				+0.2
1,360,542	+				-0.9
1,360,543	-				+0.2
1,360,543	-				-0.3
1,360,570	+				+0.1
1,360,570	+				-0.3
1,360,570	+				-0.1
1,360,570	+				-1.6
1,360,570	+				+0.6
1,360,571	-				-0.4
1,360,571	-				+1.7
1,360,571	-				+0.2
1,360,571	-				-0.1
1,360,571	-				-0.4
1,360,571	-				-0.3
1,360,571	-				-0.4
1,360,571	-				+0.6
1,360,592	+				-0.1
1,360,592	+				-1.6
1,360,592	+				-0.1
1,360,592	+				+1.7
1,360,906	-		AO353_06100	0.55	+0.3
1,360,922	+		AO353_06100	0.58	+0.7
1,360,922	+		AO353_06100	0.58	-0.7
1,360,923	-		AO353_06100	0.58	+0.8
1,361,109	-				+1.1
1,361,109	-				-0.4
1,361,240	+				-1.5
1,361,240	+				+0.7
1,361,241	-				+2.0
1,361,241	-				-1.4
1,361,425	+				+0.4
1,361,425	+				-0.5
1,361,425	+				+0.3
1,361,425	+				-0.5
1,361,426	-				-1.9
1,361,426	-				-0.1
1,361,427	+				-0.1
1,361,427	+				+0.4
1,361,427	+				-1.4
1,361,427	+				-0.8
1,361,427	+				-0.1
1,361,427	+				+0.8
1,361,427	+				-0.2
1,361,427	+				-1.3
1,361,427	+				-1.9
1,361,428	-				-0.3
1,361,428	-				-0.1
1,361,428	-				-0.0
1,361,428	-				-0.7
1,361,428	-				-0.7
1,361,437	-				-0.1
1,361,437	-				-0.3
1,361,437	-				-0.1
1,361,437	-				-0.7
1,361,437	-				-0.4
1,361,450	-				-0.6
1,361,450	-				-0.2
1,361,450	-				-0.1
1,361,458	+				-1.1
1,361,458	+				-1.7
1,361,459	-				+2.6
1,361,487	+				+0.7
1,361,487	+				-0.7
1,361,487	+				+0.3
1,361,487	+				-0.7
1,361,487	+				-0.1
1,361,488	-				-1.3
1,361,488	-				+1.0
1,361,488	-				-1.2
1,361,545	+				+1.2