Experiment: nitrite (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04170 and AO353_04175 are separated by 369 nucleotides AO353_04175 and AO353_04180 are separated by 77 nucleotides
AO353_04170: AO353_04170 - hypothetical protein, at 893,914 to 894,384
_04170
AO353_04175: AO353_04175 - glycerol uptake facilitator GlpF, at 894,754 to 895,605
_04175
AO353_04180: AO353_04180 - glycerol kinase, at 895,683 to 897,188
_04180
Position (kb) 894
895
896 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 893.758 kb on + strand at 893.835 kb on - strand at 893.901 kb on + strand at 893.901 kb on + strand at 893.901 kb on + strand at 893.901 kb on + strand at 893.901 kb on + strand at 893.901 kb on + strand at 893.902 kb on - strand at 893.902 kb on - strand at 893.902 kb on - strand at 893.902 kb on - strand at 893.902 kb on - strand at 893.902 kb on - strand at 894.011 kb on + strand, within AO353_04170 at 894.011 kb on + strand, within AO353_04170 at 894.011 kb on + strand, within AO353_04170 at 894.011 kb on + strand, within AO353_04170 at 894.011 kb on + strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.012 kb on - strand, within AO353_04170 at 894.015 kb on + strand, within AO353_04170 at 894.015 kb on + strand, within AO353_04170 at 894.015 kb on + strand, within AO353_04170 at 894.015 kb on + strand, within AO353_04170 at 894.015 kb on + strand, within AO353_04170 at 894.074 kb on - strand, within AO353_04170 at 894.099 kb on - strand, within AO353_04170 at 894.175 kb on + strand, within AO353_04170 at 894.175 kb on + strand, within AO353_04170 at 894.176 kb on - strand, within AO353_04170 at 894.176 kb on - strand, within AO353_04170 at 894.176 kb on - strand, within AO353_04170 at 894.176 kb on - strand, within AO353_04170 at 894.176 kb on - strand, within AO353_04170 at 894.299 kb on + strand, within AO353_04170 at 894.299 kb on + strand, within AO353_04170 at 894.300 kb on - strand, within AO353_04170 at 894.300 kb on - strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.326 kb on + strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.327 kb on - strand, within AO353_04170 at 894.416 kb on + strand at 894.431 kb on + strand at 894.431 kb on + strand at 894.432 kb on - strand at 894.456 kb on + strand at 894.456 kb on + strand at 894.456 kb on + strand at 894.456 kb on + strand at 894.456 kb on + strand at 894.457 kb on - strand at 894.457 kb on - strand at 894.457 kb on - strand at 894.457 kb on - strand at 894.483 kb on + strand at 894.483 kb on + strand at 894.484 kb on - strand at 894.549 kb on + strand at 894.549 kb on + strand at 894.549 kb on + strand at 894.549 kb on + strand at 894.550 kb on - strand at 894.550 kb on - strand at 894.555 kb on - strand at 894.555 kb on - strand at 894.558 kb on + strand at 894.605 kb on + strand at 894.607 kb on + strand at 894.608 kb on - strand at 894.625 kb on + strand at 894.625 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.628 kb on + strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.629 kb on - strand at 894.632 kb on + strand at 894.632 kb on + strand at 894.633 kb on - strand at 894.633 kb on - strand at 894.646 kb on + strand at 894.646 kb on + strand at 894.646 kb on + strand at 894.647 kb on - strand at 894.659 kb on + strand at 894.821 kb on + strand at 894.931 kb on + strand, within AO353_04175 at 894.932 kb on - strand, within AO353_04175 at 894.993 kb on - strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.015 kb on - strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.028 kb on - strand, within AO353_04175 at 895.075 kb on + strand, within AO353_04175 at 895.085 kb on - strand, within AO353_04175 at 895.336 kb on - strand, within AO353_04175 at 895.392 kb on + strand, within AO353_04175 at 895.449 kb on + strand, within AO353_04175 at 895.538 kb on + strand at 895.538 kb on + strand at 895.539 kb on - strand at 895.550 kb on + strand at 895.550 kb on + strand at 895.550 kb on + strand at 895.557 kb on + strand at 895.557 kb on + strand at 895.557 kb on + strand at 895.558 kb on - strand at 895.558 kb on - strand at 895.558 kb on - strand at 895.661 kb on + strand at 895.661 kb on + strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.700 kb on + strand at 895.700 kb on + strand at 895.701 kb on - strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.986 kb on + strand, within AO353_04180 at 895.986 kb on + strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.097 kb on + strand, within AO353_04180 at 896.097 kb on + strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.242 kb on - strand, within AO353_04180 at 896.242 kb on - strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.365 kb on - strand, within AO353_04180 at 896.469 kb on + strand, within AO353_04180 at 896.470 kb on - strand, within AO353_04180 at 896.470 kb on - strand, within AO353_04180 at 896.517 kb on - strand, within AO353_04180 at 896.517 kb on - strand, within AO353_04180 at 896.574 kb on + strand, within AO353_04180 at 896.575 kb on - strand, within AO353_04180 at 896.575 kb on - strand, within AO353_04180
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite (N) remove 893,758 + +0.1 893,835 - -1.2 893,901 + +0.4 893,901 + +1.0 893,901 + +0.3 893,901 + -1.2 893,901 + +1.1 893,901 + -0.5 893,902 - -2.4 893,902 - -1.9 893,902 - +0.5 893,902 - -0.5 893,902 - -1.1 893,902 - -1.7 894,011 + AO353_04170 0.21 +0.6 894,011 + AO353_04170 0.21 +0.7 894,011 + AO353_04170 0.21 -0.9 894,011 + AO353_04170 0.21 -0.3 894,011 + AO353_04170 0.21 -0.5 894,012 - AO353_04170 0.21 -0.9 894,012 - AO353_04170 0.21 +0.5 894,012 - AO353_04170 0.21 -0.8 894,012 - AO353_04170 0.21 -0.1 894,012 - AO353_04170 0.21 -0.9 894,012 - AO353_04170 0.21 -0.5 894,012 - AO353_04170 0.21 +0.1 894,012 - AO353_04170 0.21 -0.7 894,012 - AO353_04170 0.21 +1.7 894,012 - AO353_04170 0.21 -0.9 894,012 - AO353_04170 0.21 -0.8 894,015 + AO353_04170 0.21 -0.0 894,015 + AO353_04170 0.21 -0.9 894,015 + AO353_04170 0.21 -0.0 894,015 + AO353_04170 0.21 +0.4 894,015 + AO353_04170 0.21 +1.5 894,074 - AO353_04170 0.34 +0.6 894,099 - AO353_04170 0.39 +0.5 894,175 + AO353_04170 0.55 +0.5 894,175 + AO353_04170 0.55 -0.5 894,176 - AO353_04170 0.56 -0.7 894,176 - AO353_04170 0.56 -0.7 894,176 - AO353_04170 0.56 -0.3 894,176 - AO353_04170 0.56 -0.2 894,176 - AO353_04170 0.56 +0.5 894,299 + AO353_04170 0.82 +1.5 894,299 + AO353_04170 0.82 -0.5 894,300 - AO353_04170 0.82 +0.2 894,300 - AO353_04170 0.82 -0.0 894,326 + AO353_04170 0.87 -0.2 894,326 + AO353_04170 0.87 +0.9 894,326 + AO353_04170 0.87 +0.7 894,326 + AO353_04170 0.87 +1.5 894,326 + AO353_04170 0.87 +0.0 894,326 + AO353_04170 0.87 +0.4 894,326 + AO353_04170 0.87 -0.2 894,326 + AO353_04170 0.87 -1.0 894,326 + AO353_04170 0.87 -0.3 894,327 - AO353_04170 0.88 +0.6 894,327 - AO353_04170 0.88 -0.2 894,327 - AO353_04170 0.88 +0.5 894,327 - AO353_04170 0.88 -2.3 894,327 - AO353_04170 0.88 +0.4 894,327 - AO353_04170 0.88 -2.0 894,416 + -0.2 894,431 + +0.1 894,431 + +1.1 894,432 - -0.7 894,456 + +1.4 894,456 + -1.7 894,456 + +0.3 894,456 + -0.5 894,456 + +0.3 894,457 - -0.3 894,457 - +1.4 894,457 - +0.2 894,457 - +1.3 894,483 + +0.4 894,483 + -0.7 894,484 - +0.9 894,549 + -0.0 894,549 + +0.5 894,549 + +0.4 894,549 + +0.3 894,550 - -1.4 894,550 - +0.4 894,555 - -0.5 894,555 - -2.0 894,558 + -0.3 894,605 + +0.7 894,607 + +0.2 894,608 - +0.3 894,625 + +2.1 894,625 + +0.5 894,628 + -0.4 894,628 + -1.3 894,628 + -0.8 894,628 + +0.0 894,628 + -0.7 894,628 + +1.0 894,628 + +0.9 894,628 + -0.1 894,629 - -2.1 894,629 - +0.6 894,629 - -2.1 894,629 - +0.0 894,629 - -0.9 894,629 - -0.1 894,629 - +0.5 894,629 - -1.5 894,632 + -0.0 894,632 + +0.4 894,633 - +0.9 894,633 - -1.3 894,646 + -0.2 894,646 + -0.7 894,646 + +0.3 894,647 - -0.2 894,659 + -2.0 894,821 + -1.1 894,931 + AO353_04175 0.21 -0.8 894,932 - AO353_04175 0.21 -0.9 894,993 - AO353_04175 0.28 -1.6 895,014 + AO353_04175 0.31 -0.5 895,014 + AO353_04175 0.31 -1.1 895,014 + AO353_04175 0.31 +0.4 895,014 + AO353_04175 0.31 -0.2 895,015 - AO353_04175 0.31 -2.1 895,027 + AO353_04175 0.32 -0.7 895,027 + AO353_04175 0.32 -0.2 895,027 + AO353_04175 0.32 -1.2 895,027 + AO353_04175 0.32 -1.1 895,028 - AO353_04175 0.32 +0.2 895,075 + AO353_04175 0.38 +1.4 895,085 - AO353_04175 0.39 -1.3 895,336 - AO353_04175 0.68 +0.8 895,392 + AO353_04175 0.75 +0.6 895,449 + AO353_04175 0.82 -0.3 895,538 + +0.1 895,538 + -0.4 895,539 - +0.3 895,550 + -1.0 895,550 + -0.9 895,550 + -0.6 895,557 + +0.4 895,557 + +0.5 895,557 + +0.2 895,558 - +0.1 895,558 - +0.5 895,558 - -1.2 895,661 + -0.4 895,661 + -0.2 895,662 - +1.0 895,662 - -0.5 895,662 - +0.6 895,662 - -0.6 895,662 - -1.3 895,700 + -0.7 895,700 + -0.5 895,701 - +0.1 895,707 + -0.3 895,707 + -1.5 895,707 + +0.6 895,707 + -0.9 895,707 + +0.2 895,707 + -0.1 895,707 + -0.7 895,707 + -0.7 895,707 + +0.5 895,707 + +0.1 895,707 + -0.6 895,708 - -1.0 895,708 - +0.8 895,708 - -1.3 895,708 - +0.5 895,708 - +0.4 895,708 - -2.0 895,708 - -0.4 895,708 - -0.2 895,986 + AO353_04180 0.20 +0.1 895,986 + AO353_04180 0.20 -0.4 895,987 - AO353_04180 0.20 +0.7 895,987 - AO353_04180 0.20 +1.0 895,987 - AO353_04180 0.20 -0.2 896,061 + AO353_04180 0.25 +0.2 896,061 + AO353_04180 0.25 -0.3 896,061 + AO353_04180 0.25 -0.3 896,061 + AO353_04180 0.25 +1.0 896,061 + AO353_04180 0.25 -0.7 896,061 + AO353_04180 0.25 -0.4 896,061 + AO353_04180 0.25 -1.3 896,061 + AO353_04180 0.25 +0.4 896,061 + AO353_04180 0.25 -1.2 896,061 + AO353_04180 0.25 -0.2 896,061 + AO353_04180 0.25 +1.4 896,061 + AO353_04180 0.25 +0.5 896,062 - AO353_04180 0.25 -1.2 896,062 - AO353_04180 0.25 +0.4 896,062 - AO353_04180 0.25 -0.0 896,062 - AO353_04180 0.25 -1.6 896,062 - -1.0 896,062 - AO353_04180 0.25 -0.3 896,062 - AO353_04180 0.25 +0.0 896,062 - AO353_04180 0.25 +1.1 896,062 - AO353_04180 0.25 -2.0 896,062 - AO353_04180 0.25 -0.5 896,097 + AO353_04180 0.27 -1.5 896,097 + AO353_04180 0.27 +0.9 896,098 - AO353_04180 0.28 -0.5 896,098 - AO353_04180 0.28 +1.5 896,098 - AO353_04180 0.28 -0.2 896,098 - AO353_04180 0.28 +0.7 896,241 + AO353_04180 0.37 -0.4 896,241 + AO353_04180 0.37 +0.2 896,241 + AO353_04180 0.37 -0.7 896,242 - AO353_04180 0.37 -0.1 896,242 - AO353_04180 0.37 -1.0 896,364 + AO353_04180 0.45 -0.9 896,364 + AO353_04180 0.45 +1.1 896,364 + AO353_04180 0.45 +0.8 896,364 + AO353_04180 0.45 +0.7 896,365 - AO353_04180 0.45 +0.9 896,469 + AO353_04180 0.52 +2.9 896,470 - AO353_04180 0.52 -0.4 896,470 - AO353_04180 0.52 +0.1 896,517 - AO353_04180 0.55 -1.1 896,517 - AO353_04180 0.55 +0.4 896,574 + AO353_04180 0.59 -0.1 896,575 - AO353_04180 0.59 -0.8 896,575 - AO353_04180 0.59 -2.0
Or see this region's nucleotide sequence