Strain Fitness in Pantoea sp. MT58 around IAI47_17550

Experiment: Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,720,717	+		IAI47_17545	0.72	-0.8
3,720,740	+		IAI47_17545	0.73	+0.5
3,720,740	+		IAI47_17545	0.73	+1.0
3,720,740	+		IAI47_17545	0.73	-0.3
3,720,740	+		IAI47_17545	0.73	+2.8
3,720,740	+		IAI47_17545	0.73	+1.2
3,720,740	+		IAI47_17545	0.73	+1.0
3,720,740	+		IAI47_17545	0.73	-1.9
3,720,740	+		IAI47_17545	0.73	+1.7
3,720,740	+		IAI47_17545	0.73	+1.7
3,720,740	+		IAI47_17545	0.73	+0.0
3,720,740	+		IAI47_17545	0.73	+0.7
3,720,740	+		IAI47_17545	0.73	+1.3
3,720,740	+		IAI47_17545	0.73	-1.7
3,720,741	-		IAI47_17545	0.73	-0.1
3,720,741	-		IAI47_17545	0.73	-0.7
3,720,741	-		IAI47_17545	0.73	+0.2
3,720,741	-		IAI47_17545	0.73	+1.7
3,720,741	-		IAI47_17545	0.73	-2.6
3,720,741	-		IAI47_17545	0.73	+0.5
3,720,741	-		IAI47_17545	0.73	+2.3
3,720,741	-		IAI47_17545	0.73	+0.2
3,720,741	-		IAI47_17545	0.73	-0.9
3,720,741	-		IAI47_17545	0.73	+0.5
3,720,741	-		IAI47_17545	0.73	-2.6
3,720,744	+		IAI47_17545	0.74	+0.9
3,720,745	-		IAI47_17545	0.74	+0.8
3,720,745	-		IAI47_17545	0.74	-1.0
3,720,745	-		IAI47_17545	0.74	+1.1
3,720,765	+		IAI47_17545	0.75	-0.4
3,720,765	+		IAI47_17545	0.75	-0.9
3,720,765	+		IAI47_17545	0.75	-1.7
3,720,765	+		IAI47_17545	0.75	+2.4
3,720,765	+		IAI47_17545	0.75	+1.3
3,720,765	+		IAI47_17545	0.75	-2.7
3,720,766	-		IAI47_17545	0.75	-0.7
3,720,766	-		IAI47_17545	0.75	+1.0
3,720,766	-		IAI47_17545	0.75	-0.2
3,720,766	-		IAI47_17545	0.75	+0.5
3,720,766	-		IAI47_17545	0.75	+1.7
3,720,766	-		IAI47_17545	0.75	-2.2
3,720,766	-		IAI47_17545	0.75	-0.6
3,720,858	+		IAI47_17545	0.82	+0.4
3,720,858	+		IAI47_17545	0.82	+1.2
3,720,859	-		IAI47_17545	0.82	-1.8
3,720,864	+		IAI47_17545	0.83	-0.1
3,720,927	+		IAI47_17545	0.87	-0.1
3,720,962	+				+1.1
3,720,963	-				+0.0
3,720,963	-				-1.5
3,720,968	+				-1.6
3,720,968	+				+0.7
3,720,968	+				+0.3
3,720,968	+				+1.1
3,720,968	+				+1.3
3,720,968	+				+0.6
3,720,968	+				+0.8
3,720,968	+				-1.7
3,720,968	+				-0.8
3,720,968	+				-1.8
3,720,968	+				+0.2
3,720,968	+				-0.5
3,720,968	+				-0.8
3,720,968	+				-0.6
3,720,968	+				-0.0
3,720,968	+				-0.2
3,720,968	+				-1.7
3,720,969	-				+1.3
3,720,969	-				-0.4
3,720,969	-				+1.8
3,720,969	-				-1.2
3,720,969	-				-0.8
3,720,969	-				-1.1
3,720,969	-				-0.9
3,720,969	-				+0.7
3,720,969	-				+0.8
3,720,969	-				-0.8
3,720,969	-				+0.7
3,720,969	-				-0.6
3,720,969	-				-0.7
3,721,096	+				+0.2
3,721,096	+				+0.5
3,721,096	+				+1.4
3,721,096	+				+0.8
3,721,096	+				+2.8
3,721,096	+				+0.4
3,721,096	+				+1.6
3,721,096	+				-0.9
3,721,096	+				-2.0
3,721,096	+				-1.4
3,721,096	+				+0.7
3,721,097	-				+0.4
3,721,097	-				-1.3
3,721,097	-				+1.2
3,721,097	-				+1.8
3,721,097	-				-0.7
3,721,193	-				+0.6
3,721,193	-				-1.7
3,721,259	+				+0.2
3,721,259	+				+2.8
3,721,259	+				-1.3
3,721,367	+				-0.7
3,721,367	+				-0.6
3,721,378	+				+0.4
3,721,378	+				+2.8
3,721,378	+				+1.0
3,721,700	+				+1.0
3,721,700	+				+0.4
3,721,752	-		IAI47_17550	0.18	-0.7
3,721,766	+		IAI47_17550	0.20	-1.2
3,721,793	+		IAI47_17550	0.24	+1.8
3,721,824	+		IAI47_17550	0.30	-1.2
3,721,825	-		IAI47_17550	0.30	-0.1
3,721,853	+		IAI47_17550	0.34	-0.7
3,721,854	-		IAI47_17550	0.35	+0.6
3,721,854	-		IAI47_17550	0.35	+0.3
3,721,854	-		IAI47_17550	0.35	-0.2
3,721,854	-		IAI47_17550	0.35	-1.7
3,721,854	-		IAI47_17550	0.35	+1.1
3,721,854	-		IAI47_17550	0.35	+2.4
3,721,854	-		IAI47_17550	0.35	+1.4
3,721,983	+		IAI47_17550	0.56	-0.8
3,721,983	+		IAI47_17550	0.56	-0.4
3,721,984	-		IAI47_17550	0.56	-0.7
3,721,984	-		IAI47_17550	0.56	-0.2
3,721,984	-		IAI47_17550	0.56	-0.4
3,721,984	-		IAI47_17550	0.56	-0.4
3,722,041	+		IAI47_17550	0.66	-0.7
3,722,041	+		IAI47_17550	0.66	+0.2
3,722,041	+		IAI47_17550	0.66	+1.2
3,722,041	+		IAI47_17550	0.66	+0.8
3,722,042	-		IAI47_17550	0.66	-0.9
3,722,180	+		IAI47_17550	0.89	-0.7
3,722,180	+		IAI47_17550	0.89	-0.3
3,722,180	+		IAI47_17550	0.89	-1.2
3,722,181	-		IAI47_17550	0.89	+1.5
3,722,225	+				-1.0
3,722,225	+				-1.0
3,722,225	+				+2.1
3,722,225	+				+0.2
3,722,225	+				-0.1
3,722,225	+				+0.4
3,722,225	+				+0.1
3,722,225	+				+1.8
3,722,225	+				+0.9
3,722,226	-				-0.6
3,722,226	-				-1.8
3,722,226	-				-0.2
3,722,226	-				+0.8
3,722,226	-				-1.2
3,722,226	-				-1.6
3,722,226	-				-1.2
3,722,226	-				-0.6
3,722,238	+				-0.8
3,722,239	-				-2.1
3,722,239	-				-1.4
3,722,239	-				-2.1
3,722,294	+				+1.5
3,722,295	-				+0.5
3,722,305	+				-1.0
3,722,305	+				-0.4
3,722,306	-				+0.1
3,722,306	-				+1.8
3,722,335	-				-0.3
3,722,507	+		IAI47_17555	0.23	-0.5
3,722,507	+		IAI47_17555	0.23	+3.1
3,722,507	+		IAI47_17555	0.23	+0.2
3,722,507	+		IAI47_17555	0.23	-0.5
3,722,507	+		IAI47_17555	0.23	+1.4
3,722,507	+		IAI47_17555	0.23	+2.2
3,722,507	+		IAI47_17555	0.23	-0.4
3,722,507	+		IAI47_17555	0.23	-0.6
3,722,507	+		IAI47_17555	0.23	+1.8
3,722,507	+		IAI47_17555	0.23	+0.1
3,722,508	-		IAI47_17555	0.23	+0.8
3,722,508	-		IAI47_17555	0.23	+2.2
3,722,587	+		IAI47_17555	0.30	+2.2
3,722,598	+		IAI47_17555	0.31	-0.9
3,722,702	-		IAI47_17555	0.41	-0.4
3,722,743	+		IAI47_17555	0.44	-0.8
3,722,743	+		IAI47_17555	0.44	-0.2
3,722,743	+		IAI47_17555	0.44	+2.2
3,722,744	-		IAI47_17555	0.45	-0.2
3,722,744	-		IAI47_17555	0.45	+0.3
3,722,822	+		IAI47_17555	0.52	-2.1
3,722,822	+		IAI47_17555	0.52	-1.0
3,722,822	+		IAI47_17555	0.52	+2.5
3,722,822	+		IAI47_17555	0.52	+1.3
3,722,822	+		IAI47_17555	0.52	-3.0
3,722,822	+		IAI47_17555	0.52	-0.2
3,722,822	+		IAI47_17555	0.52	+0.8
3,722,822	+		IAI47_17555	0.52	-0.1
3,722,823	-		IAI47_17555	0.52	-0.2
3,722,823	-		IAI47_17555	0.52	-1.2
3,722,823	-		IAI47_17555	0.52	-2.2
3,722,823	-		IAI47_17555	0.52	+1.5
3,722,921	+		IAI47_17555	0.61	+0.8
3,722,921	+		IAI47_17555	0.61	+2.0
3,722,935	+		IAI47_17555	0.62	-1.0
3,722,935	+		IAI47_17555	0.62	+1.5
3,722,957	-		IAI47_17555	0.64	+0.2
3,722,983	-		IAI47_17555	0.66	-0.6
3,722,983	-		IAI47_17555	0.66	-1.5
3,723,176	+		IAI47_17555	0.84	+1.5
3,723,176	+		IAI47_17555	0.84	-1.6
3,723,203	+		IAI47_17555	0.87	+1.2
3,723,203	+		IAI47_17555	0.87	+0.1
3,723,203	+		IAI47_17555	0.87	-0.4
3,723,203	+		IAI47_17555	0.87	+0.3
3,723,203	+		IAI47_17555	0.87	-0.9
3,723,203	+		IAI47_17555	0.87	+0.8
3,723,203	+		IAI47_17555	0.87	+0.8
3,723,203	+		IAI47_17555	0.87	-0.1
3,723,203	+		IAI47_17555	0.87	-1.5
3,723,204	-		IAI47_17555	0.87	+1.5
3,723,204	-		IAI47_17555	0.87	-0.8
3,723,204	-		IAI47_17555	0.87	-0.0
3,723,204	-		IAI47_17555	0.87	+0.8
3,723,204	-		IAI47_17555	0.87	+4.2
3,723,204	-		IAI47_17555	0.87	+2.0
3,723,204	-		IAI47_17555	0.87	+0.9
3,723,204	-		IAI47_17555	0.87	-0.6
3,723,204	-		IAI47_17555	0.87	+0.3
3,723,204	-		IAI47_17555	0.87	-2.8
3,723,204	-		IAI47_17555	0.87	-0.1
3,723,204	-		IAI47_17555	0.87	+0.7
3,723,204	-		IAI47_17555	0.87	+0.9
3,723,209	+		IAI47_17555	0.87	+0.4
3,723,210	-		IAI47_17555	0.87	+0.6
3,723,210	-		IAI47_17555	0.87	-0.1
3,723,210	-		IAI47_17555	0.87	+0.4
3,723,210	-		IAI47_17555	0.87	+0.0
3,723,210	-		IAI47_17555	0.87	+1.4