Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23660 and BWI76_RS23665 are separated by 53 nucleotides BWI76_RS23665 and BWI76_RS23670 are separated by 363 nucleotides
BWI76_RS23660: BWI76_RS23660 - pentose kinase, at 4,937,909 to 4,939,414
_RS23660
BWI76_RS23665: BWI76_RS23665 - 2-deoxyribose-5-phosphate aldolase, at 4,939,468 to 4,940,217
_RS23665
BWI76_RS23670: BWI76_RS23670 - alkaline phosphatase, at 4,940,581 to 4,941,381
_RS23670
Position (kb)
4939
4940
4941 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4938.529 kb on + strand, within BWI76_RS23660 at 4938.669 kb on - strand, within BWI76_RS23660 at 4938.781 kb on + strand, within BWI76_RS23660 at 4939.262 kb on + strand, within BWI76_RS23660 at 4939.279 kb on + strand at 4939.279 kb on + strand at 4939.287 kb on - strand at 4939.287 kb on - strand at 4939.828 kb on + strand, within BWI76_RS23665 at 4939.857 kb on - strand, within BWI76_RS23665 at 4939.879 kb on + strand, within BWI76_RS23665 at 4940.000 kb on + strand, within BWI76_RS23665 at 4940.042 kb on + strand, within BWI76_RS23665 at 4940.088 kb on + strand, within BWI76_RS23665 at 4940.093 kb on + strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.331 kb on - strand at 4940.466 kb on - strand at 4940.473 kb on + strand at 4940.566 kb on + strand at 4940.566 kb on + strand at 4940.571 kb on + strand at 4940.576 kb on + strand at 4940.579 kb on - strand at 4940.623 kb on + strand at 4941.022 kb on - strand, within BWI76_RS23670 at 4941.207 kb on - strand, within BWI76_RS23670
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 4,938,529 + BWI76_RS23660 0.41 -0.0 4,938,669 - BWI76_RS23660 0.50 -0.9 4,938,781 + BWI76_RS23660 0.58 -0.1 4,939,262 + BWI76_RS23660 0.90 -0.3 4,939,279 + -0.0 4,939,279 + -1.0 4,939,287 - -0.4 4,939,287 - -0.2 4,939,828 + BWI76_RS23665 0.48 +1.5 4,939,857 - BWI76_RS23665 0.52 +1.7 4,939,879 + BWI76_RS23665 0.55 +0.7 4,940,000 + BWI76_RS23665 0.71 +1.8 4,940,042 + BWI76_RS23665 0.77 +1.2 4,940,088 + BWI76_RS23665 0.83 +1.7 4,940,093 + BWI76_RS23665 0.83 +1.1 4,940,133 - BWI76_RS23665 0.89 +0.5 4,940,133 - BWI76_RS23665 0.89 -0.3 4,940,331 - -1.9 4,940,466 - -0.0 4,940,473 + +1.1 4,940,566 + +1.5 4,940,566 + -0.0 4,940,571 + +1.5 4,940,576 + +0.9 4,940,579 - -1.0 4,940,623 + -0.5 4,941,022 - BWI76_RS23670 0.55 -0.7 4,941,207 - BWI76_RS23670 0.78 +0.4
Or see this region's nucleotide sequence