Experiment: selenite 0.0025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5259 and Pf6N2E2_5260 are separated by 0 nucleotides Pf6N2E2_5260 and Pf6N2E2_5261 are separated by 55 nucleotides Pf6N2E2_5261 and Pf6N2E2_5262 are separated by 142 nucleotides Pf6N2E2_5262 and Pf6N2E2_5263 are separated by 121 nucleotides
Pf6N2E2_5259 - FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 6,054,124 to 6,055,032
_5259
Pf6N2E2_5260 - Phosphate acetyltransferase (EC 2.3.1.8), at 6,055,033 to 6,057,132
_5260
Pf6N2E2_5261 - FIG00956983: hypothetical protein, at 6,057,188 to 6,057,358
_5261
Pf6N2E2_5262 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8), at 6,057,501 to 6,057,986
_5262
Pf6N2E2_5263 - Glutathione peroxidase family protein, at 6,058,108 to 6,058,590
_5263
Position (kb)
6055
6056
6057
6058 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6054.114 kb on + strand at 6054.114 kb on + strand at 6054.132 kb on + strand at 6054.132 kb on + strand at 6054.132 kb on + strand at 6054.141 kb on - strand at 6054.236 kb on + strand, within Pf6N2E2_5259 at 6054.237 kb on - strand, within Pf6N2E2_5259 at 6054.237 kb on - strand, within Pf6N2E2_5259 at 6054.590 kb on + strand, within Pf6N2E2_5259 at 6054.590 kb on + strand, within Pf6N2E2_5259 at 6054.590 kb on + strand, within Pf6N2E2_5259 at 6054.590 kb on + strand, within Pf6N2E2_5259 at 6054.602 kb on + strand, within Pf6N2E2_5259 at 6054.602 kb on + strand, within Pf6N2E2_5259 at 6054.716 kb on + strand, within Pf6N2E2_5259 at 6054.716 kb on + strand, within Pf6N2E2_5259 at 6054.717 kb on - strand, within Pf6N2E2_5259 at 6054.717 kb on - strand, within Pf6N2E2_5259 at 6054.717 kb on - strand, within Pf6N2E2_5259 at 6054.768 kb on - strand, within Pf6N2E2_5259 at 6055.034 kb on + strand at 6055.034 kb on + strand at 6055.034 kb on + strand at 6055.034 kb on + strand at 6055.034 kb on + strand at 6055.035 kb on - strand at 6055.035 kb on - strand at 6055.035 kb on - strand at 6055.035 kb on - strand at 6055.035 kb on - strand at 6055.085 kb on + strand at 6055.086 kb on - strand at 6055.086 kb on - strand at 6055.086 kb on - strand at 6055.086 kb on - strand at 6055.086 kb on - strand at 6055.415 kb on + strand, within Pf6N2E2_5260 at 6055.415 kb on + strand, within Pf6N2E2_5260 at 6055.415 kb on + strand, within Pf6N2E2_5260 at 6055.416 kb on - strand, within Pf6N2E2_5260 at 6055.416 kb on - strand, within Pf6N2E2_5260 at 6055.532 kb on + strand, within Pf6N2E2_5260 at 6055.784 kb on + strand, within Pf6N2E2_5260 at 6055.785 kb on - strand, within Pf6N2E2_5260 at 6055.968 kb on + strand, within Pf6N2E2_5260 at 6055.969 kb on - strand, within Pf6N2E2_5260 at 6056.174 kb on + strand, within Pf6N2E2_5260 at 6056.174 kb on + strand, within Pf6N2E2_5260 at 6056.174 kb on + strand, within Pf6N2E2_5260 at 6056.174 kb on + strand, within Pf6N2E2_5260 at 6056.175 kb on - strand, within Pf6N2E2_5260 at 6056.786 kb on + strand, within Pf6N2E2_5260 at 6056.786 kb on + strand, within Pf6N2E2_5260 at 6056.787 kb on - strand, within Pf6N2E2_5260 at 6056.787 kb on - strand, within Pf6N2E2_5260 at 6056.856 kb on - strand, within Pf6N2E2_5260 at 6057.060 kb on + strand at 6057.117 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.169 kb on + strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.170 kb on - strand at 6057.183 kb on + strand at 6057.183 kb on + strand at 6057.183 kb on + strand at 6057.184 kb on - strand at 6057.184 kb on - strand at 6057.184 kb on - strand at 6057.257 kb on + strand, within Pf6N2E2_5261 at 6057.458 kb on + strand at 6057.458 kb on + strand at 6057.458 kb on + strand at 6057.459 kb on - strand at 6057.481 kb on + strand at 6057.482 kb on - strand at 6057.482 kb on - strand at 6057.518 kb on + strand at 6057.518 kb on + strand at 6057.519 kb on - strand at 6057.537 kb on + strand at 6057.537 kb on + strand at 6057.538 kb on - strand at 6057.538 kb on - strand at 6057.539 kb on + strand at 6057.540 kb on - strand at 6057.601 kb on - strand, within Pf6N2E2_5262 at 6057.702 kb on + strand, within Pf6N2E2_5262 at 6057.702 kb on + strand, within Pf6N2E2_5262 at 6057.703 kb on - strand, within Pf6N2E2_5262 at 6057.997 kb on - strand at 6058.044 kb on + strand at 6058.058 kb on + strand at 6058.058 kb on + strand at 6058.059 kb on - strand at 6058.059 kb on - strand at 6058.128 kb on + strand at 6058.128 kb on + strand at 6058.129 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction selenite 0.0025 M remove 6,054,114 + +1.5 6,054,114 + +0.1 6,054,132 + +0.1 6,054,132 + +0.1 6,054,132 + -0.2 6,054,141 - +0.3 6,054,236 + Pf6N2E2_5259 0.12 -1.3 6,054,237 - Pf6N2E2_5259 0.12 +0.2 6,054,237 - Pf6N2E2_5259 0.12 -1.9 6,054,590 + Pf6N2E2_5259 0.51 +0.6 6,054,590 + Pf6N2E2_5259 0.51 +0.8 6,054,590 + Pf6N2E2_5259 0.51 +0.4 6,054,590 + Pf6N2E2_5259 0.51 +0.2 6,054,602 + Pf6N2E2_5259 0.53 -0.6 6,054,602 + Pf6N2E2_5259 0.53 -0.7 6,054,716 + Pf6N2E2_5259 0.65 -1.4 6,054,716 + Pf6N2E2_5259 0.65 -1.0 6,054,717 - Pf6N2E2_5259 0.65 -1.0 6,054,717 - Pf6N2E2_5259 0.65 -0.1 6,054,717 - Pf6N2E2_5259 0.65 +0.9 6,054,768 - Pf6N2E2_5259 0.71 -0.9 6,055,034 + +1.0 6,055,034 + -1.1 6,055,034 + +0.9 6,055,034 + +0.3 6,055,034 + -1.2 6,055,035 - +0.1 6,055,035 - +2.0 6,055,035 - +0.4 6,055,035 - +0.3 6,055,035 - -0.1 6,055,085 + +0.6 6,055,086 - -0.0 6,055,086 - +0.7 6,055,086 - -0.6 6,055,086 - -1.0 6,055,086 - +0.6 6,055,415 + Pf6N2E2_5260 0.18 -0.9 6,055,415 + Pf6N2E2_5260 0.18 -1.4 6,055,415 + Pf6N2E2_5260 0.18 -1.2 6,055,416 - Pf6N2E2_5260 0.18 -0.4 6,055,416 - Pf6N2E2_5260 0.18 -1.4 6,055,532 + Pf6N2E2_5260 0.24 -0.6 6,055,784 + Pf6N2E2_5260 0.36 -0.9 6,055,785 - Pf6N2E2_5260 0.36 +0.0 6,055,968 + Pf6N2E2_5260 0.45 -0.1 6,055,969 - Pf6N2E2_5260 0.45 -0.7 6,056,174 + Pf6N2E2_5260 0.54 -0.5 6,056,174 + Pf6N2E2_5260 0.54 +0.5 6,056,174 + Pf6N2E2_5260 0.54 +0.6 6,056,174 + Pf6N2E2_5260 0.54 -0.4 6,056,175 - Pf6N2E2_5260 0.54 +1.0 6,056,786 + Pf6N2E2_5260 0.83 +2.0 6,056,786 + Pf6N2E2_5260 0.83 +0.1 6,056,787 - Pf6N2E2_5260 0.84 +0.1 6,056,787 - Pf6N2E2_5260 0.84 -1.0 6,056,856 - Pf6N2E2_5260 0.87 -1.0 6,057,060 + +0.0 6,057,117 + -0.5 6,057,169 + +1.0 6,057,169 + +0.1 6,057,169 + -0.4 6,057,169 + +1.2 6,057,169 + -0.6 6,057,169 + -0.1 6,057,169 + -0.4 6,057,169 + +0.1 6,057,170 - -0.1 6,057,170 - +0.9 6,057,170 - +0.3 6,057,170 - +1.0 6,057,170 - +0.2 6,057,170 - -2.1 6,057,170 - +1.2 6,057,183 + -0.3 6,057,183 + +0.4 6,057,183 + +0.3 6,057,184 - +1.3 6,057,184 - -1.4 6,057,184 - +1.0 6,057,257 + Pf6N2E2_5261 0.40 +0.3 6,057,458 + -1.6 6,057,458 + -0.1 6,057,458 + -1.2 6,057,459 - +0.4 6,057,481 + -1.1 6,057,482 - +0.5 6,057,482 - -0.2 6,057,518 + +1.8 6,057,518 + -0.7 6,057,519 - +0.2 6,057,537 + -1.0 6,057,537 + +0.2 6,057,538 - +1.6 6,057,538 - -0.2 6,057,539 + -2.8 6,057,540 - +1.2 6,057,601 - Pf6N2E2_5262 0.21 +1.8 6,057,702 + Pf6N2E2_5262 0.41 +1.1 6,057,702 + Pf6N2E2_5262 0.41 +0.0 6,057,703 - Pf6N2E2_5262 0.42 -0.4 6,057,997 - +2.0 6,058,044 + -0.3 6,058,058 + -0.5 6,058,058 + +0.5 6,058,059 - -0.4 6,058,059 - -0.4 6,058,128 + -0.4 6,058,128 + -1.6 6,058,129 - -0.8
Or see this region's nucleotide sequence