Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS14490 and PFLU_RS14495 are separated by 109 nucleotides PFLU_RS14495 and PFLU_RS14500 are separated by 173 nucleotides PFLU_RS14500 and PFLU_RS14505 overlap by 4 nucleotides
PFLU_RS14490: PFLU_RS14490 - nitronate monooxygenase, at 3,243,895 to 3,244,953
_RS14490
PFLU_RS14495: PFLU_RS14495 - alpha/beta hydrolase, at 3,245,063 to 3,245,941
_RS14495
PFLU_RS14500: PFLU_RS14500 - hypothetical protein, at 3,246,115 to 3,246,693
_RS14500
PFLU_RS14505: PFLU_RS14505 - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 3,246,690 to 3,247,736
_RS14505
Position (kb) 3245
3246 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3244.220 kb on + strand, within PFLU_RS14490 at 3244.221 kb on - strand, within PFLU_RS14490 at 3244.221 kb on - strand, within PFLU_RS14490 at 3244.228 kb on - strand, within PFLU_RS14490 at 3244.468 kb on + strand, within PFLU_RS14490 at 3244.468 kb on + strand, within PFLU_RS14490 at 3244.468 kb on + strand, within PFLU_RS14490 at 3244.468 kb on + strand, within PFLU_RS14490 at 3244.469 kb on - strand, within PFLU_RS14490 at 3244.469 kb on - strand, within PFLU_RS14490 at 3244.469 kb on - strand, within PFLU_RS14490 at 3244.469 kb on - strand, within PFLU_RS14490 at 3244.511 kb on - strand, within PFLU_RS14490 at 3244.640 kb on + strand, within PFLU_RS14490 at 3244.640 kb on + strand, within PFLU_RS14490 at 3244.641 kb on - strand, within PFLU_RS14490 at 3244.641 kb on - strand, within PFLU_RS14490 at 3244.641 kb on - strand, within PFLU_RS14490 at 3244.661 kb on + strand, within PFLU_RS14490 at 3244.664 kb on + strand, within PFLU_RS14490 at 3244.664 kb on + strand, within PFLU_RS14490 at 3244.664 kb on + strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.665 kb on - strand, within PFLU_RS14490 at 3244.993 kb on + strand at 3244.993 kb on + strand at 3244.993 kb on + strand at 3244.993 kb on + strand at 3244.993 kb on + strand at 3244.994 kb on - strand at 3244.994 kb on - strand at 3245.026 kb on + strand at 3245.026 kb on + strand at 3245.026 kb on + strand at 3245.026 kb on + strand at 3245.026 kb on + strand at 3245.084 kb on + strand at 3245.182 kb on + strand, within PFLU_RS14495 at 3245.183 kb on - strand, within PFLU_RS14495 at 3245.183 kb on - strand, within PFLU_RS14495 at 3245.184 kb on + strand, within PFLU_RS14495 at 3245.184 kb on + strand, within PFLU_RS14495 at 3245.299 kb on + strand, within PFLU_RS14495 at 3245.360 kb on + strand, within PFLU_RS14495 at 3245.360 kb on + strand, within PFLU_RS14495 at 3245.360 kb on + strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.361 kb on - strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.373 kb on + strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.374 kb on - strand, within PFLU_RS14495 at 3245.419 kb on - strand, within PFLU_RS14495 at 3245.419 kb on - strand, within PFLU_RS14495 at 3245.496 kb on + strand, within PFLU_RS14495 at 3245.496 kb on + strand, within PFLU_RS14495 at 3245.496 kb on + strand, within PFLU_RS14495 at 3245.496 kb on + strand, within PFLU_RS14495 at 3245.497 kb on - strand, within PFLU_RS14495 at 3245.497 kb on - strand, within PFLU_RS14495 at 3245.500 kb on + strand, within PFLU_RS14495 at 3245.500 kb on + strand, within PFLU_RS14495 at 3245.500 kb on + strand, within PFLU_RS14495 at 3245.538 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.631 kb on + strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.632 kb on - strand, within PFLU_RS14495 at 3245.703 kb on + strand, within PFLU_RS14495 at 3245.704 kb on - strand, within PFLU_RS14495 at 3245.704 kb on - strand, within PFLU_RS14495 at 3245.709 kb on + strand, within PFLU_RS14495 at 3245.709 kb on + strand, within PFLU_RS14495 at 3245.709 kb on + strand, within PFLU_RS14495 at 3245.709 kb on + strand, within PFLU_RS14495 at 3245.709 kb on + strand, within PFLU_RS14495 at 3245.710 kb on - strand, within PFLU_RS14495 at 3245.710 kb on - strand, within PFLU_RS14495 at 3245.710 kb on - strand, within PFLU_RS14495 at 3245.787 kb on - strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.809 kb on + strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.810 kb on - strand, within PFLU_RS14495 at 3245.877 kb on + strand at 3245.877 kb on + strand at 3245.878 kb on - strand at 3245.878 kb on - strand at 3245.878 kb on - strand at 3245.888 kb on + strand at 3245.888 kb on + strand at 3245.889 kb on - strand at 3245.951 kb on - strand at 3245.951 kb on - strand at 3245.955 kb on + strand at 3245.956 kb on - strand at 3246.061 kb on + strand at 3246.078 kb on - strand at 3246.128 kb on + strand at 3246.129 kb on - strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.180 kb on + strand, within PFLU_RS14500 at 3246.180 kb on + strand, within PFLU_RS14500 at 3246.305 kb on + strand, within PFLU_RS14500 at 3246.595 kb on + strand, within PFLU_RS14500 at 3246.595 kb on + strand, within PFLU_RS14500 at 3246.596 kb on - strand, within PFLU_RS14500 at 3246.596 kb on - strand, within PFLU_RS14500 at 3246.596 kb on - strand, within PFLU_RS14500 at 3246.596 kb on - strand, within PFLU_RS14500 at 3246.603 kb on + strand, within PFLU_RS14500 at 3246.604 kb on - strand, within PFLU_RS14500 at 3246.615 kb on + strand, within PFLU_RS14500 at 3246.615 kb on + strand, within PFLU_RS14500 at 3246.615 kb on + strand, within PFLU_RS14500 at 3246.615 kb on + strand, within PFLU_RS14500 at 3246.616 kb on - strand, within PFLU_RS14500 at 3246.616 kb on - strand, within PFLU_RS14500 at 3246.616 kb on - strand, within PFLU_RS14500 at 3246.657 kb on + strand at 3246.657 kb on + strand at 3246.657 kb on + strand at 3246.657 kb on + strand at 3246.691 kb on + strand at 3246.691 kb on + strand at 3246.764 kb on + strand at 3246.765 kb on - strand at 3246.771 kb on + strand at 3246.771 kb on + strand at 3246.771 kb on + strand at 3246.771 kb on + strand at 3246.771 kb on + strand at 3246.771 kb on + strand at 3246.772 kb on - strand at 3246.772 kb on - strand at 3246.772 kb on - strand at 3246.772 kb on - strand at 3246.772 kb on - strand at 3246.774 kb on + strand at 3246.775 kb on - strand at 3246.877 kb on + strand, within PFLU_RS14505 at 3246.877 kb on + strand, within PFLU_RS14505 at 3246.877 kb on + strand, within PFLU_RS14505 at 3246.878 kb on - strand, within PFLU_RS14505
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 3,244,220 + PFLU_RS14490 0.31 -1.6 3,244,221 - PFLU_RS14490 0.31 -0.6 3,244,221 - PFLU_RS14490 0.31 +0.7 3,244,228 - PFLU_RS14490 0.31 +0.4 3,244,468 + PFLU_RS14490 0.54 -0.2 3,244,468 + PFLU_RS14490 0.54 +0.8 3,244,468 + PFLU_RS14490 0.54 +1.1 3,244,468 + PFLU_RS14490 0.54 +0.2 3,244,469 - PFLU_RS14490 0.54 +1.5 3,244,469 - PFLU_RS14490 0.54 -1.5 3,244,469 - PFLU_RS14490 0.54 +1.6 3,244,469 - PFLU_RS14490 0.54 -1.2 3,244,511 - PFLU_RS14490 0.58 +0.2 3,244,640 + PFLU_RS14490 0.70 -0.4 3,244,640 + PFLU_RS14490 0.70 -1.6 3,244,641 - PFLU_RS14490 0.70 -1.8 3,244,641 - PFLU_RS14490 0.70 -1.4 3,244,641 - PFLU_RS14490 0.70 +0.0 3,244,661 + PFLU_RS14490 0.72 -0.9 3,244,664 + PFLU_RS14490 0.73 +0.9 3,244,664 + PFLU_RS14490 0.73 +0.1 3,244,664 + PFLU_RS14490 0.73 +1.2 3,244,665 - PFLU_RS14490 0.73 -1.2 3,244,665 - PFLU_RS14490 0.73 +0.0 3,244,665 - PFLU_RS14490 0.73 +1.0 3,244,665 - PFLU_RS14490 0.73 -0.0 3,244,665 - PFLU_RS14490 0.73 +0.6 3,244,665 - PFLU_RS14490 0.73 -0.1 3,244,665 - PFLU_RS14490 0.73 -1.9 3,244,993 + -0.0 3,244,993 + -0.7 3,244,993 + -0.3 3,244,993 + +0.2 3,244,993 + +1.0 3,244,994 - +1.4 3,244,994 - +0.5 3,245,026 + +0.5 3,245,026 + +0.1 3,245,026 + +1.0 3,245,026 + -1.5 3,245,026 + -2.4 3,245,084 + -0.5 3,245,182 + PFLU_RS14495 0.14 +0.4 3,245,183 - PFLU_RS14495 0.14 +0.9 3,245,183 - PFLU_RS14495 0.14 -1.4 3,245,184 + PFLU_RS14495 0.14 +0.0 3,245,184 + PFLU_RS14495 0.14 +0.4 3,245,299 + PFLU_RS14495 0.27 -0.2 3,245,360 + PFLU_RS14495 0.34 -0.2 3,245,360 + PFLU_RS14495 0.34 +1.5 3,245,360 + PFLU_RS14495 0.34 +0.4 3,245,361 - PFLU_RS14495 0.34 +1.0 3,245,361 - PFLU_RS14495 0.34 -1.3 3,245,361 - PFLU_RS14495 0.34 -0.1 3,245,361 - PFLU_RS14495 0.34 +1.5 3,245,361 - PFLU_RS14495 0.34 -0.9 3,245,361 - PFLU_RS14495 0.34 +0.4 3,245,373 + PFLU_RS14495 0.35 +1.0 3,245,373 + PFLU_RS14495 0.35 +0.0 3,245,373 + PFLU_RS14495 0.35 -0.2 3,245,373 + PFLU_RS14495 0.35 +0.2 3,245,373 + PFLU_RS14495 0.35 +0.5 3,245,373 + PFLU_RS14495 0.35 -0.0 3,245,374 - PFLU_RS14495 0.35 -1.2 3,245,374 - PFLU_RS14495 0.35 -2.8 3,245,374 - PFLU_RS14495 0.35 -1.2 3,245,374 - PFLU_RS14495 0.35 +0.2 3,245,374 - PFLU_RS14495 0.35 +0.6 3,245,374 - PFLU_RS14495 0.35 +0.1 3,245,374 - PFLU_RS14495 0.35 -0.2 3,245,419 - PFLU_RS14495 0.41 +0.4 3,245,419 - PFLU_RS14495 0.41 -0.6 3,245,496 + PFLU_RS14495 0.49 -2.8 3,245,496 + PFLU_RS14495 0.49 -0.7 3,245,496 + PFLU_RS14495 0.49 -1.5 3,245,496 + PFLU_RS14495 0.49 -0.1 3,245,497 - PFLU_RS14495 0.49 +0.7 3,245,497 - PFLU_RS14495 0.49 -0.4 3,245,500 + PFLU_RS14495 0.50 +1.1 3,245,500 + PFLU_RS14495 0.50 -0.9 3,245,500 + PFLU_RS14495 0.50 -0.6 3,245,538 + PFLU_RS14495 0.54 -0.6 3,245,631 + PFLU_RS14495 0.65 +0.2 3,245,631 + PFLU_RS14495 0.65 +0.8 3,245,631 + PFLU_RS14495 0.65 +0.6 3,245,631 + PFLU_RS14495 0.65 +0.1 3,245,631 + PFLU_RS14495 0.65 -0.3 3,245,631 + PFLU_RS14495 0.65 -0.6 3,245,632 - PFLU_RS14495 0.65 +2.0 3,245,632 - PFLU_RS14495 0.65 -1.8 3,245,632 - PFLU_RS14495 0.65 +0.0 3,245,632 - PFLU_RS14495 0.65 -0.6 3,245,632 - PFLU_RS14495 0.65 +0.6 3,245,632 - PFLU_RS14495 0.65 -0.8 3,245,703 + PFLU_RS14495 0.73 +1.5 3,245,704 - PFLU_RS14495 0.73 +0.4 3,245,704 - PFLU_RS14495 0.73 -0.4 3,245,709 + PFLU_RS14495 0.73 -0.9 3,245,709 + PFLU_RS14495 0.73 +1.6 3,245,709 + PFLU_RS14495 0.73 +0.7 3,245,709 + PFLU_RS14495 0.73 -1.3 3,245,709 + PFLU_RS14495 0.73 -2.4 3,245,710 - PFLU_RS14495 0.74 +0.7 3,245,710 - PFLU_RS14495 0.74 +0.2 3,245,710 - PFLU_RS14495 0.74 +0.0 3,245,787 - PFLU_RS14495 0.82 +1.1 3,245,809 + PFLU_RS14495 0.85 -0.6 3,245,809 + PFLU_RS14495 0.85 +1.4 3,245,809 + PFLU_RS14495 0.85 -2.6 3,245,809 + PFLU_RS14495 0.85 -1.4 3,245,809 + PFLU_RS14495 0.85 -1.4 3,245,809 + PFLU_RS14495 0.85 +1.3 3,245,809 + PFLU_RS14495 0.85 -0.6 3,245,809 + PFLU_RS14495 0.85 -1.3 3,245,810 - PFLU_RS14495 0.85 +0.4 3,245,810 - PFLU_RS14495 0.85 +1.3 3,245,810 - PFLU_RS14495 0.85 +0.2 3,245,810 - PFLU_RS14495 0.85 -1.9 3,245,810 - PFLU_RS14495 0.85 -0.1 3,245,810 - PFLU_RS14495 0.85 -2.4 3,245,877 + +0.6 3,245,877 + -1.6 3,245,878 - -0.9 3,245,878 - +0.1 3,245,878 - -0.5 3,245,888 + -0.9 3,245,888 + -2.4 3,245,889 - +0.8 3,245,951 - +1.6 3,245,951 - -0.9 3,245,955 + +0.9 3,245,956 - -0.3 3,246,061 + -0.1 3,246,078 - -0.0 3,246,128 + -0.1 3,246,129 - +0.5 3,246,142 + -0.0 3,246,142 + -1.2 3,246,142 + -0.8 3,246,142 + +1.2 3,246,142 + +0.3 3,246,142 + -0.4 3,246,142 + +1.9 3,246,142 + -1.8 3,246,142 + +0.4 3,246,142 + -1.2 3,246,143 - +0.4 3,246,143 - -0.6 3,246,143 - -2.4 3,246,143 - -0.6 3,246,143 - -0.6 3,246,143 - +0.1 3,246,143 - -2.9 3,246,180 + PFLU_RS14500 0.11 -1.0 3,246,180 + PFLU_RS14500 0.11 -0.9 3,246,305 + PFLU_RS14500 0.33 -1.3 3,246,595 + PFLU_RS14500 0.83 -1.3 3,246,595 + PFLU_RS14500 0.83 -0.8 3,246,596 - PFLU_RS14500 0.83 -0.9 3,246,596 - PFLU_RS14500 0.83 -0.0 3,246,596 - PFLU_RS14500 0.83 -0.6 3,246,596 - PFLU_RS14500 0.83 -1.9 3,246,603 + PFLU_RS14500 0.84 -0.8 3,246,604 - PFLU_RS14500 0.84 +2.0 3,246,615 + PFLU_RS14500 0.86 +0.7 3,246,615 + PFLU_RS14500 0.86 -0.1 3,246,615 + PFLU_RS14500 0.86 -1.0 3,246,615 + PFLU_RS14500 0.86 -0.6 3,246,616 - PFLU_RS14500 0.87 -0.6 3,246,616 - PFLU_RS14500 0.87 -1.6 3,246,616 - PFLU_RS14500 0.87 +0.1 3,246,657 + -0.1 3,246,657 + -1.4 3,246,657 + -1.2 3,246,657 + -0.3 3,246,691 + -2.2 3,246,691 + -0.8 3,246,764 + -0.0 3,246,765 - -2.2 3,246,771 + +1.2 3,246,771 + +0.1 3,246,771 + -0.6 3,246,771 + +0.6 3,246,771 + -0.9 3,246,771 + +1.3 3,246,772 - +1.1 3,246,772 - +0.8 3,246,772 - -0.1 3,246,772 - -1.4 3,246,772 - +0.1 3,246,774 + +0.7 3,246,775 - +0.4 3,246,877 + PFLU_RS14505 0.18 -1.2 3,246,877 + PFLU_RS14505 0.18 +1.7 3,246,877 + PFLU_RS14505 0.18 +1.6 3,246,878 - PFLU_RS14505 0.18 +0.6
Or see this region's nucleotide sequence