Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27245

Experiment: Thymine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine (N)
5,958,717	+				+2.7
5,958,726	+				+1.0
5,958,726	+				+1.4
5,958,726	+				+0.6
5,958,726	+				-0.0
5,958,726	+				-0.9
5,958,727	-				-1.4
5,958,727	-				-2.5
5,958,727	-				-1.0
5,958,745	+				-2.4
5,958,745	+				+0.1
5,958,745	+				-0.3
5,958,745	+				-2.0
5,958,746	-				-0.0
5,958,746	-				-1.0
5,958,759	+				-0.0
5,958,759	+				-2.1
5,958,759	+				+0.1
5,958,759	+				-0.7
5,958,760	-				-0.8
5,958,760	-				-0.2
5,958,760	-				-0.9
5,958,831	-		AO353_27240	0.11	-0.3
5,958,831	-		AO353_27240	0.11	-2.3
5,958,920	+		AO353_27240	0.22	+2.2
5,958,920	+		AO353_27240	0.22	+0.3
5,958,920	+		AO353_27240	0.22	-1.7
5,958,920	+		AO353_27240	0.22	+0.9
5,958,920	+		AO353_27240	0.22	+1.0
5,958,920	+		AO353_27240	0.22	-1.7
5,958,921	-		AO353_27240	0.22	+1.5
5,958,921	-		AO353_27240	0.22	+0.9
5,958,921	-		AO353_27240	0.22	+0.6
5,959,018	+		AO353_27240	0.34	+0.8
5,959,018	+		AO353_27240	0.34	+1.3
5,959,018	+		AO353_27240	0.34	-0.0
5,959,018	+		AO353_27240	0.34	-0.3
5,959,018	+		AO353_27240	0.34	-0.5
5,959,018	+		AO353_27240	0.34	-1.3
5,959,019	-		AO353_27240	0.35	+0.3
5,959,019	-		AO353_27240	0.35	-0.6
5,959,019	-		AO353_27240	0.35	+1.0
5,959,019	-		AO353_27240	0.35	+0.3
5,959,019	-		AO353_27240	0.35	+0.0
5,959,043	-		AO353_27240	0.38	-1.6
5,959,081	+		AO353_27240	0.42	+0.3
5,959,081	+		AO353_27240	0.42	+0.4
5,959,081	+		AO353_27240	0.42	-1.0
5,959,081	+		AO353_27240	0.42	-0.9
5,959,081	+		AO353_27240	0.42	-0.2
5,959,081	+		AO353_27240	0.42	+0.3
5,959,081	+		AO353_27240	0.42	-0.7
5,959,081	+		AO353_27240	0.42	-0.6
5,959,082	-		AO353_27240	0.43	-0.2
5,959,082	-		AO353_27240	0.43	-0.4
5,959,082	-		AO353_27240	0.43	+0.1
5,959,082	-		AO353_27240	0.43	+0.6
5,959,214	-		AO353_27240	0.59	-0.3
5,959,420	+		AO353_27240	0.85	-1.1
5,959,420	+		AO353_27240	0.85	+0.1
5,959,420	+		AO353_27240	0.85	-1.1
5,959,420	+		AO353_27240	0.85	+1.6
5,959,421	-		AO353_27240	0.85	-2.0
5,959,421	-		AO353_27240	0.85	-0.2
5,959,453	+		AO353_27240	0.89	-0.6
5,959,453	+		AO353_27240	0.89	-1.4
5,959,453	+		AO353_27240	0.89	-1.2
5,959,453	+		AO353_27240	0.89	-0.4
5,959,453	+		AO353_27240	0.89	-3.0
5,959,454	-		AO353_27240	0.89	-0.2
5,959,454	-		AO353_27240	0.89	+0.4
5,959,532	+				-0.0
5,959,532	+				-0.0
5,959,532	+				-0.0
5,959,532	+				-0.7
5,959,532	+				+1.0
5,959,532	+				-0.0
5,959,533	-				-0.7
5,959,533	-				-2.2
5,959,533	-				+0.4
5,959,538	+				-0.7
5,959,538	+				+1.0
5,959,538	+				+0.3
5,959,538	+				+0.3
5,959,538	+				-1.3
5,959,538	+				-2.7
5,959,538	+				-0.7
5,959,538	+				-0.0
5,959,539	-				+0.2
5,959,539	-				+0.9
5,959,559	+				+0.1
5,959,717	+				+0.1
5,959,717	+				-2.0
5,959,717	+				+1.0
5,959,718	-				-0.2
5,959,718	-				-1.2
5,959,894	-		AO353_27245	0.38	+1.2
5,959,975	+		AO353_27245	0.52	+1.4
5,959,975	+		AO353_27245	0.52	-0.2
5,959,975	+		AO353_27245	0.52	-3.0
5,959,975	+		AO353_27245	0.52	-2.1
5,959,976	-		AO353_27245	0.53	+1.2
5,959,976	-		AO353_27245	0.53	-2.0
5,959,998	+		AO353_27245	0.57	+0.6
5,960,109	+		AO353_27245	0.77	+0.3
5,960,109	+		AO353_27245	0.77	-0.4
5,960,109	+		AO353_27245	0.77	+0.8
5,960,110	-		AO353_27245	0.77	+1.1
5,960,110	-		AO353_27245	0.77	+1.8
5,960,110	-		AO353_27245	0.77	-0.1
5,960,234	+				+0.2
5,960,234	+				-0.5
5,960,234	+				+1.2
5,960,234	+				-1.6
5,960,234	+				+0.1
5,960,234	+				-0.9
5,960,234	+				-0.5
5,960,234	+				+0.2
5,960,234	+				-0.8
5,960,234	+				-0.5
5,960,234	+				+0.1
5,960,234	+				-0.3
5,960,234	+				-0.5
5,960,234	+				+0.5
5,960,235	-				+1.1
5,960,235	-				-0.9
5,960,235	-				+2.9
5,960,235	-				+0.8
5,960,235	-				-0.6
5,960,235	-				+0.3
5,960,235	-				-1.4
5,960,235	-				+0.3
5,960,235	-				-0.4
5,960,364	+		AO353_27250	0.22	-0.1
5,960,587	-		AO353_27250	0.56	-1.3
5,960,587	-		AO353_27250	0.56	+0.1
5,960,587	-		AO353_27250	0.56	-0.3
5,960,587	-				+0.6
5,960,618	+		AO353_27250	0.61	+0.6
5,960,618	+		AO353_27250	0.61	+0.1
5,960,618	+		AO353_27250	0.61	+0.4
5,960,649	+		AO353_27250	0.66	-0.1
5,960,649	+		AO353_27250	0.66	+0.2
5,960,649	+		AO353_27250	0.66	-0.8
5,960,650	-		AO353_27250	0.66	-0.8
5,960,650	-		AO353_27250	0.66	+0.2
5,960,650	-		AO353_27250	0.66	-0.9
5,960,685	+		AO353_27250	0.71	-1.2
5,960,685	+		AO353_27250	0.71	+0.8
5,960,686	-		AO353_27250	0.71	-0.5
5,960,686	-		AO353_27250	0.71	-0.4
5,960,688	+		AO353_27250	0.72	+1.0
5,960,689	-		AO353_27250	0.72	+1.2
5,960,689	-		AO353_27250	0.72	-0.2
5,960,875	+				+0.4
5,960,875	+				-1.4
5,960,875	+				-0.2
5,960,875	+				-0.6
5,960,875	+				+1.2
5,960,875	+				+1.3
5,960,876	-				+0.2
5,960,876	-				+0.2
5,960,876	-				-0.3
5,960,876	-				-1.8
5,960,876	-				+1.4
5,960,876	-				-0.0
5,960,890	+				-0.4
5,960,891	-				+1.0
5,960,926	-				+0.8
5,961,069	+		AO353_27255	0.14	+0.1
5,961,069	+		AO353_27255	0.14	-2.0
5,961,069	+		AO353_27255	0.14	+0.1
5,961,070	-		AO353_27255	0.14	-0.8
5,961,070	-		AO353_27255	0.14	-0.3
5,961,070	-		AO353_27255	0.14	-1.6
5,961,106	+		AO353_27255	0.17	+2.2
5,961,233	-		AO353_27255	0.30	-1.9
5,961,233	-		AO353_27255	0.30	-0.8
5,961,233	-		AO353_27255	0.30	-0.0
5,961,233	-		AO353_27255	0.30	+0.2