Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13440 and BWI76_RS13445 are separated by 72 nucleotides BWI76_RS13445 and BWI76_RS13450 are separated by 80 nucleotides BWI76_RS13450 and BWI76_RS13455 are separated by 3 nucleotides
BWI76_RS13440: BWI76_RS13440 - DUF2566 domain-containing protein, at 2,803,124 to 2,803,297
_RS13440
BWI76_RS13445: BWI76_RS13445 - alpha/beta hydrolase, at 2,803,370 to 2,804,140
_RS13445
BWI76_RS13450: BWI76_RS13450 - acyl-CoA thioesterase, at 2,804,221 to 2,805,477
_RS13450
BWI76_RS13455: BWI76_RS13455 - salicylaldehyde dehydrogenase, at 2,805,481 to 2,806,914
_RS13455
Position (kb)
2804
2805
2806 Strain fitness (log2 ratio)
-1
0
1 at 2803.388 kb on + strand at 2803.593 kb on - strand, within BWI76_RS13445 at 2803.782 kb on - strand, within BWI76_RS13445 at 2804.244 kb on - strand at 2804.264 kb on - strand at 2804.306 kb on + strand at 2804.578 kb on + strand, within BWI76_RS13450 at 2804.645 kb on + strand, within BWI76_RS13450 at 2804.797 kb on + strand, within BWI76_RS13450 at 2804.846 kb on - strand, within BWI76_RS13450 at 2804.846 kb on - strand, within BWI76_RS13450 at 2805.218 kb on + strand at 2805.251 kb on - strand, within BWI76_RS13450 at 2805.798 kb on + strand, within BWI76_RS13455 at 2806.050 kb on - strand, within BWI76_RS13455 at 2806.363 kb on + strand, within BWI76_RS13455 at 2806.436 kb on - strand, within BWI76_RS13455
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 2,803,388 + +0.6 2,803,593 - BWI76_RS13445 0.29 -0.5 2,803,782 - BWI76_RS13445 0.53 -0.7 2,804,244 - +0.6 2,804,264 - +0.3 2,804,306 + -0.4 2,804,578 + BWI76_RS13450 0.28 +1.6 2,804,645 + BWI76_RS13450 0.34 +1.1 2,804,797 + BWI76_RS13450 0.46 +1.1 2,804,846 - BWI76_RS13450 0.50 -0.3 2,804,846 - BWI76_RS13450 0.50 +0.1 2,805,218 + -0.1 2,805,251 - BWI76_RS13450 0.82 +0.9 2,805,798 + BWI76_RS13455 0.22 +0.3 2,806,050 - BWI76_RS13455 0.40 -0.3 2,806,363 + BWI76_RS13455 0.62 -0.3 2,806,436 - BWI76_RS13455 0.67 +0.7
Or see this region's nucleotide sequence