Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03630 and BWI76_RS03635 overlap by 7 nucleotides BWI76_RS03635 and BWI76_RS03640 are separated by 158 nucleotides BWI76_RS03640 and BWI76_RS03645 overlap by 4 nucleotides
BWI76_RS03630: BWI76_RS03630 - LysR family transcriptional regulator, at 750,179 to 751,087
_RS03630
BWI76_RS03635: BWI76_RS03635 - FosA family fosfomycin resistance glutathione transferase, at 751,081 to 751,524
_RS03635
BWI76_RS03640: BWI76_RS03640 - amino acid permease-associated protein, at 751,683 to 753,026
_RS03640
BWI76_RS03645: BWI76_RS03645 - hypothetical protein, at 753,023 to 753,934
_RS03645
Position (kb) 751
752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 750.734 kb on + strand, within BWI76_RS03630 at 750.734 kb on + strand, within BWI76_RS03630 at 750.751 kb on + strand, within BWI76_RS03630 at 750.880 kb on + strand, within BWI76_RS03630 at 750.948 kb on + strand, within BWI76_RS03630 at 751.005 kb on + strand at 751.646 kb on - strand at 751.769 kb on + strand at 751.861 kb on - strand, within BWI76_RS03640 at 751.946 kb on - strand, within BWI76_RS03640 at 751.990 kb on - strand, within BWI76_RS03640 at 752.242 kb on + strand, within BWI76_RS03640 at 752.243 kb on - strand, within BWI76_RS03640 at 752.243 kb on - strand, within BWI76_RS03640 at 752.366 kb on - strand, within BWI76_RS03640 at 752.412 kb on - strand, within BWI76_RS03640 at 752.460 kb on - strand, within BWI76_RS03640 at 752.582 kb on + strand, within BWI76_RS03640 at 752.590 kb on - strand, within BWI76_RS03640 at 752.597 kb on + strand, within BWI76_RS03640 at 752.626 kb on - strand, within BWI76_RS03640 at 752.697 kb on - strand, within BWI76_RS03640 at 752.697 kb on - strand, within BWI76_RS03640 at 752.782 kb on - strand, within BWI76_RS03640 at 752.789 kb on - strand, within BWI76_RS03640 at 752.961 kb on - strand at 753.069 kb on + strand at 753.077 kb on - strand at 753.140 kb on + strand, within BWI76_RS03645 at 753.148 kb on - strand, within BWI76_RS03645 at 753.580 kb on + strand, within BWI76_RS03645 at 753.673 kb on - strand, within BWI76_RS03645 at 753.684 kb on - strand, within BWI76_RS03645 at 753.730 kb on + strand, within BWI76_RS03645 at 753.744 kb on + strand, within BWI76_RS03645 at 753.773 kb on - strand, within BWI76_RS03645 at 753.774 kb on - strand, within BWI76_RS03645 at 753.848 kb on - strand at 753.848 kb on - strand at 753.858 kb on - strand at 753.858 kb on - strand at 753.866 kb on - strand at 753.874 kb on - strand at 753.874 kb on - strand at 753.874 kb on - strand at 753.885 kb on + strand at 753.887 kb on - strand at 753.887 kb on - strand at 753.887 kb on - strand at 753.888 kb on - strand at 753.891 kb on + strand at 753.893 kb on - strand at 753.902 kb on + strand at 753.903 kb on + strand at 753.903 kb on + strand at 753.903 kb on + strand at 753.903 kb on + strand at 753.903 kb on + strand at 753.903 kb on + strand at 753.910 kb on - strand at 753.910 kb on - strand at 753.910 kb on - strand at 753.910 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.911 kb on - strand at 753.937 kb on + strand at 753.954 kb on - strand at 753.956 kb on - strand at 753.987 kb on + strand at 754.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 750,734 + BWI76_RS03630 0.61 +1.3 750,734 + BWI76_RS03630 0.61 -1.8 750,751 + BWI76_RS03630 0.63 +1.3 750,880 + BWI76_RS03630 0.77 +1.5 750,948 + BWI76_RS03630 0.85 +0.4 751,005 + +0.4 751,646 - -1.8 751,769 + -0.8 751,861 - BWI76_RS03640 0.13 +0.5 751,946 - BWI76_RS03640 0.20 +0.1 751,990 - BWI76_RS03640 0.23 -0.2 752,242 + BWI76_RS03640 0.42 +0.4 752,243 - BWI76_RS03640 0.42 -3.3 752,243 - BWI76_RS03640 0.42 -0.0 752,366 - BWI76_RS03640 0.51 -0.8 752,412 - BWI76_RS03640 0.54 -0.1 752,460 - BWI76_RS03640 0.58 -0.0 752,582 + BWI76_RS03640 0.67 +0.4 752,590 - BWI76_RS03640 0.67 +0.9 752,597 + BWI76_RS03640 0.68 +2.7 752,626 - BWI76_RS03640 0.70 +0.7 752,697 - BWI76_RS03640 0.75 +0.6 752,697 - BWI76_RS03640 0.75 -0.6 752,782 - BWI76_RS03640 0.82 -0.1 752,789 - BWI76_RS03640 0.82 +0.9 752,961 - +0.1 753,069 + +1.8 753,077 - +0.7 753,140 + BWI76_RS03645 0.13 +0.4 753,148 - BWI76_RS03645 0.14 -0.4 753,580 + BWI76_RS03645 0.61 +0.5 753,673 - BWI76_RS03645 0.71 +0.1 753,684 - BWI76_RS03645 0.72 +0.6 753,730 + BWI76_RS03645 0.78 -0.4 753,744 + BWI76_RS03645 0.79 -1.2 753,773 - BWI76_RS03645 0.82 -0.3 753,774 - BWI76_RS03645 0.82 +1.0 753,848 - -0.1 753,848 - +0.2 753,858 - -0.1 753,858 - -0.1 753,866 - +0.2 753,874 - +0.1 753,874 - +0.3 753,874 - +0.1 753,885 + -1.3 753,887 - -0.4 753,887 - -0.0 753,887 - -0.2 753,888 - -1.2 753,891 + +0.5 753,893 - -0.2 753,902 + +0.5 753,903 + -0.2 753,903 + -0.8 753,903 + -0.6 753,903 + +0.2 753,903 + +0.3 753,903 + -0.5 753,910 - +0.9 753,910 - -0.9 753,910 - +0.6 753,910 - -0.3 753,911 - -0.8 753,911 - -0.3 753,911 - -0.1 753,911 - -0.2 753,911 - +1.4 753,911 - +0.3 753,911 - -0.3 753,911 - +0.5 753,911 - +0.8 753,937 + +1.5 753,954 - -0.4 753,956 - +1.3 753,987 + +0.1 754,018 - +0.2
Or see this region's nucleotide sequence