Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06625 and AO353_06630 are separated by 62 nucleotides AO353_06630 and AO353_06635 overlap by 16 nucleotides
AO353_06625: AO353_06625 - hypothetical protein, at 1,474,027 to 1,478,532
_06625
AO353_06630: AO353_06630 - hypothetical protein, at 1,478,595 to 1,479,245
_06630
AO353_06635: AO353_06635 - hypothetical protein, at 1,479,230 to 1,480,954
_06635
Position (kb)
1478
1479
1480 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.607 kb on + strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.608 kb on - strand, within AO353_06625 at 1477.622 kb on + strand, within AO353_06625 at 1477.622 kb on + strand, within AO353_06625 at 1477.622 kb on + strand, within AO353_06625 at 1477.622 kb on + strand, within AO353_06625 at 1477.622 kb on + strand, within AO353_06625 at 1477.623 kb on - strand, within AO353_06625 at 1477.623 kb on - strand, within AO353_06625 at 1477.625 kb on + strand, within AO353_06625 at 1477.625 kb on + strand, within AO353_06625 at 1477.625 kb on + strand, within AO353_06625 at 1477.625 kb on + strand, within AO353_06625 at 1477.625 kb on + strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.626 kb on - strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.822 kb on + strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.823 kb on - strand, within AO353_06625 at 1477.875 kb on + strand, within AO353_06625 at 1477.875 kb on + strand, within AO353_06625 at 1477.876 kb on - strand, within AO353_06625 at 1477.889 kb on + strand, within AO353_06625 at 1477.889 kb on + strand, within AO353_06625 at 1477.890 kb on - strand, within AO353_06625 at 1477.890 kb on - strand, within AO353_06625 at 1477.916 kb on + strand, within AO353_06625 at 1477.916 kb on + strand, within AO353_06625 at 1477.916 kb on + strand, within AO353_06625 at 1477.917 kb on - strand, within AO353_06625 at 1477.917 kb on - strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.949 kb on + strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1477.950 kb on - strand, within AO353_06625 at 1478.106 kb on - strand at 1478.180 kb on + strand at 1478.180 kb on + strand at 1478.180 kb on + strand at 1478.180 kb on + strand at 1478.180 kb on + strand at 1478.226 kb on + strand at 1478.227 kb on - strand at 1478.237 kb on + strand at 1478.237 kb on + strand at 1478.237 kb on + strand at 1478.342 kb on + strand at 1478.377 kb on - strand at 1478.621 kb on - strand at 1478.743 kb on + strand, within AO353_06630 at 1478.743 kb on + strand, within AO353_06630 at 1478.744 kb on - strand, within AO353_06630 at 1478.744 kb on - strand, within AO353_06630 at 1478.752 kb on + strand, within AO353_06630 at 1478.753 kb on - strand, within AO353_06630 at 1478.753 kb on - strand, within AO353_06630 at 1478.753 kb on - strand, within AO353_06630 at 1478.753 kb on - strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.884 kb on + strand, within AO353_06630 at 1478.885 kb on - strand, within AO353_06630 at 1478.885 kb on - strand, within AO353_06630 at 1478.969 kb on - strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.990 kb on + strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.991 kb on - strand, within AO353_06630 at 1478.994 kb on + strand, within AO353_06630 at 1478.994 kb on + strand, within AO353_06630 at 1478.995 kb on - strand, within AO353_06630 at 1479.042 kb on + strand, within AO353_06630 at 1479.043 kb on - strand, within AO353_06630 at 1479.043 kb on - strand, within AO353_06630 at 1479.043 kb on - strand, within AO353_06630 at 1479.043 kb on - strand, within AO353_06630 at 1479.306 kb on + strand at 1479.306 kb on + strand at 1479.306 kb on + strand at 1479.306 kb on + strand at 1479.306 kb on + strand at 1479.307 kb on - strand at 1479.307 kb on - strand at 1479.307 kb on - strand at 1479.348 kb on + strand at 1479.348 kb on + strand at 1479.348 kb on + strand at 1479.349 kb on - strand at 1479.349 kb on - strand at 1479.349 kb on - strand at 1479.349 kb on - strand at 1479.366 kb on + strand at 1479.366 kb on + strand at 1479.367 kb on - strand at 1479.447 kb on + strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.448 kb on - strand, within AO353_06635 at 1479.477 kb on - strand, within AO353_06635 at 1479.738 kb on + strand, within AO353_06635 at 1479.738 kb on + strand, within AO353_06635 at 1479.738 kb on + strand, within AO353_06635 at 1479.739 kb on - strand, within AO353_06635 at 1479.831 kb on + strand, within AO353_06635 at 1479.831 kb on + strand, within AO353_06635 at 1479.831 kb on + strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1479.832 kb on - strand, within AO353_06635 at 1480.130 kb on + strand, within AO353_06635 at 1480.130 kb on + strand, within AO353_06635 at 1480.131 kb on - strand, within AO353_06635 at 1480.131 kb on - strand, within AO353_06635 at 1480.133 kb on + strand, within AO353_06635 at 1480.133 kb on + strand, within AO353_06635 at 1480.134 kb on - strand, within AO353_06635 at 1480.134 kb on - strand, within AO353_06635 at 1480.134 kb on - strand, within AO353_06635 at 1480.134 kb on - strand, within AO353_06635 at 1480.134 kb on - strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.177 kb on + strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635 at 1480.178 kb on - strand, within AO353_06635
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 1,477,607 + AO353_06625 0.79 +0.4 1,477,607 + AO353_06625 0.79 -0.9 1,477,607 + AO353_06625 0.79 -1.1 1,477,607 + AO353_06625 0.79 +0.2 1,477,607 + AO353_06625 0.79 +0.6 1,477,607 + AO353_06625 0.79 -0.2 1,477,607 + AO353_06625 0.79 -0.1 1,477,608 - AO353_06625 0.79 -1.1 1,477,608 - AO353_06625 0.79 -0.8 1,477,608 - AO353_06625 0.79 -0.9 1,477,608 - AO353_06625 0.79 +1.2 1,477,608 - AO353_06625 0.79 +0.2 1,477,608 - AO353_06625 0.79 -2.1 1,477,622 + AO353_06625 0.80 +0.7 1,477,622 + AO353_06625 0.80 -1.3 1,477,622 + AO353_06625 0.80 -0.1 1,477,622 + AO353_06625 0.80 +0.4 1,477,622 + AO353_06625 0.80 -0.9 1,477,623 - AO353_06625 0.80 +0.4 1,477,623 - AO353_06625 0.80 -3.7 1,477,625 + AO353_06625 0.80 +0.7 1,477,625 + AO353_06625 0.80 -0.5 1,477,625 + AO353_06625 0.80 +0.6 1,477,625 + AO353_06625 0.80 -0.4 1,477,625 + AO353_06625 0.80 +0.2 1,477,626 - AO353_06625 0.80 -0.1 1,477,626 - AO353_06625 0.80 -2.1 1,477,626 - AO353_06625 0.80 +0.0 1,477,626 - AO353_06625 0.80 -0.1 1,477,626 - AO353_06625 0.80 +0.2 1,477,626 - AO353_06625 0.80 -0.4 1,477,822 + AO353_06625 0.84 -1.0 1,477,822 + AO353_06625 0.84 +0.2 1,477,822 + AO353_06625 0.84 +1.0 1,477,822 + AO353_06625 0.84 -0.4 1,477,822 + AO353_06625 0.84 +0.9 1,477,822 + AO353_06625 0.84 -0.8 1,477,822 + AO353_06625 0.84 +1.7 1,477,822 + AO353_06625 0.84 +0.3 1,477,822 + AO353_06625 0.84 +0.2 1,477,823 - AO353_06625 0.84 -0.4 1,477,823 - AO353_06625 0.84 -1.0 1,477,823 - AO353_06625 0.84 -0.1 1,477,823 - AO353_06625 0.84 +1.2 1,477,823 - AO353_06625 0.84 +1.2 1,477,823 - AO353_06625 0.84 -1.2 1,477,823 - AO353_06625 0.84 -0.3 1,477,823 - AO353_06625 0.84 -0.1 1,477,823 - AO353_06625 0.84 -1.7 1,477,823 - AO353_06625 0.84 -0.6 1,477,823 - AO353_06625 0.84 +0.3 1,477,875 + AO353_06625 0.85 +1.8 1,477,875 + AO353_06625 0.85 -0.9 1,477,876 - AO353_06625 0.85 +0.6 1,477,889 + AO353_06625 0.86 +0.6 1,477,889 + AO353_06625 0.86 -0.3 1,477,890 - AO353_06625 0.86 +1.3 1,477,890 - AO353_06625 0.86 +0.3 1,477,916 + AO353_06625 0.86 +2.9 1,477,916 + AO353_06625 0.86 +0.3 1,477,916 + AO353_06625 0.86 -1.5 1,477,917 - AO353_06625 0.86 +0.1 1,477,917 - AO353_06625 0.86 -0.1 1,477,949 + AO353_06625 0.87 -2.4 1,477,949 + AO353_06625 0.87 +0.1 1,477,949 + AO353_06625 0.87 -0.5 1,477,949 + AO353_06625 0.87 +1.5 1,477,949 + AO353_06625 0.87 -1.9 1,477,949 + AO353_06625 0.87 -0.3 1,477,949 + AO353_06625 0.87 -0.4 1,477,949 + AO353_06625 0.87 -0.9 1,477,949 + AO353_06625 0.87 -0.3 1,477,949 + AO353_06625 0.87 -0.5 1,477,949 + AO353_06625 0.87 -0.2 1,477,950 - AO353_06625 0.87 +1.8 1,477,950 - AO353_06625 0.87 +1.6 1,477,950 - AO353_06625 0.87 -0.6 1,477,950 - AO353_06625 0.87 -0.2 1,477,950 - AO353_06625 0.87 -1.0 1,477,950 - AO353_06625 0.87 +1.0 1,477,950 - AO353_06625 0.87 -0.4 1,477,950 - AO353_06625 0.87 -1.0 1,477,950 - AO353_06625 0.87 +1.8 1,477,950 - AO353_06625 0.87 +0.2 1,478,106 - -2.7 1,478,180 + +2.0 1,478,180 + -0.6 1,478,180 + +1.1 1,478,180 + -0.1 1,478,180 + +0.3 1,478,226 + +0.7 1,478,227 - +0.4 1,478,237 + +0.1 1,478,237 + -0.1 1,478,237 + -2.3 1,478,342 + -2.3 1,478,377 - +0.7 1,478,621 - +0.8 1,478,743 + AO353_06630 0.23 -1.4 1,478,743 + AO353_06630 0.23 -0.3 1,478,744 - AO353_06630 0.23 +0.3 1,478,744 - AO353_06630 0.23 -0.1 1,478,752 + AO353_06630 0.24 -1.3 1,478,753 - AO353_06630 0.24 -0.5 1,478,753 - AO353_06630 0.24 -0.3 1,478,753 - AO353_06630 0.24 -1.5 1,478,753 - AO353_06630 0.24 -1.1 1,478,884 + AO353_06630 0.44 -2.1 1,478,884 + AO353_06630 0.44 -1.1 1,478,884 + AO353_06630 0.44 -1.0 1,478,884 + AO353_06630 0.44 -0.6 1,478,884 + AO353_06630 0.44 -1.4 1,478,884 + AO353_06630 0.44 +0.6 1,478,884 + AO353_06630 0.44 -0.6 1,478,884 + AO353_06630 0.44 +0.6 1,478,884 + AO353_06630 0.44 -0.6 1,478,884 + AO353_06630 0.44 +0.2 1,478,884 + AO353_06630 0.44 -0.1 1,478,885 - AO353_06630 0.45 +0.6 1,478,885 - AO353_06630 0.45 -1.3 1,478,969 - AO353_06630 0.57 -1.8 1,478,990 + AO353_06630 0.61 +0.5 1,478,990 + AO353_06630 0.61 -1.9 1,478,990 + AO353_06630 0.61 -0.4 1,478,990 + AO353_06630 0.61 -0.5 1,478,990 + AO353_06630 0.61 +0.6 1,478,990 + AO353_06630 0.61 +0.1 1,478,990 + AO353_06630 0.61 +0.3 1,478,990 + AO353_06630 0.61 -1.8 1,478,990 + AO353_06630 0.61 -0.7 1,478,990 + AO353_06630 0.61 -1.1 1,478,990 + AO353_06630 0.61 -0.3 1,478,990 + AO353_06630 0.61 -0.1 1,478,990 + AO353_06630 0.61 -1.7 1,478,990 + AO353_06630 0.61 -0.3 1,478,990 + AO353_06630 0.61 +0.4 1,478,991 - AO353_06630 0.61 -0.6 1,478,991 - AO353_06630 0.61 +1.6 1,478,991 - AO353_06630 0.61 -1.3 1,478,991 - AO353_06630 0.61 +0.4 1,478,991 - AO353_06630 0.61 -0.1 1,478,991 - AO353_06630 0.61 -1.6 1,478,991 - AO353_06630 0.61 +0.1 1,478,994 + AO353_06630 0.61 -0.8 1,478,994 + AO353_06630 0.61 -0.4 1,478,995 - AO353_06630 0.61 +0.7 1,479,042 + AO353_06630 0.69 +1.3 1,479,043 - AO353_06630 0.69 -1.1 1,479,043 - AO353_06630 0.69 -0.0 1,479,043 - AO353_06630 0.69 +0.4 1,479,043 - AO353_06630 0.69 -0.1 1,479,306 + +0.4 1,479,306 + -1.5 1,479,306 + +0.3 1,479,306 + -0.3 1,479,306 + -0.9 1,479,307 - +0.9 1,479,307 - -1.6 1,479,307 - -1.7 1,479,348 + +1.2 1,479,348 + +0.7 1,479,348 + +0.9 1,479,349 - +0.5 1,479,349 - +1.3 1,479,349 - -0.5 1,479,349 - +1.8 1,479,366 + -0.1 1,479,366 + +0.9 1,479,367 - +0.0 1,479,447 + AO353_06635 0.13 -0.5 1,479,448 - AO353_06635 0.13 -1.8 1,479,448 - AO353_06635 0.13 -0.5 1,479,448 - AO353_06635 0.13 -1.1 1,479,448 - AO353_06635 0.13 -0.5 1,479,448 - AO353_06635 0.13 +0.2 1,479,448 - AO353_06635 0.13 -1.3 1,479,477 - AO353_06635 0.14 -0.4 1,479,738 + AO353_06635 0.29 -1.2 1,479,738 + AO353_06635 0.29 -0.1 1,479,738 + AO353_06635 0.29 -0.4 1,479,739 - AO353_06635 0.30 -0.6 1,479,831 + AO353_06635 0.35 -1.5 1,479,831 + AO353_06635 0.35 +0.6 1,479,831 + AO353_06635 0.35 -1.9 1,479,832 - AO353_06635 0.35 -0.7 1,479,832 - AO353_06635 0.35 +0.7 1,479,832 - AO353_06635 0.35 +0.4 1,479,832 - AO353_06635 0.35 +1.2 1,479,832 - AO353_06635 0.35 +0.4 1,479,832 - AO353_06635 0.35 +0.6 1,479,832 - AO353_06635 0.35 +1.8 1,480,130 + AO353_06635 0.52 +1.3 1,480,130 + AO353_06635 0.52 -0.5 1,480,131 - AO353_06635 0.52 +0.3 1,480,131 - AO353_06635 0.52 +1.0 1,480,133 + AO353_06635 0.52 +0.8 1,480,133 + AO353_06635 0.52 -0.4 1,480,134 - AO353_06635 0.52 -1.1 1,480,134 - AO353_06635 0.52 -0.3 1,480,134 - AO353_06635 0.52 -0.6 1,480,134 - AO353_06635 0.52 +0.5 1,480,134 - AO353_06635 0.52 +0.3 1,480,177 + AO353_06635 0.55 -0.2 1,480,177 + AO353_06635 0.55 -0.8 1,480,177 + AO353_06635 0.55 -1.1 1,480,177 + AO353_06635 0.55 -0.5 1,480,177 + AO353_06635 0.55 +0.8 1,480,177 + AO353_06635 0.55 +0.2 1,480,177 + AO353_06635 0.55 -0.2 1,480,178 - AO353_06635 0.55 -0.8 1,480,178 - AO353_06635 0.55 +0.4 1,480,178 - AO353_06635 0.55 -0.4 1,480,178 - AO353_06635 0.55 -0.2 1,480,178 - AO353_06635 0.55 -2.0 1,480,178 - AO353_06635 0.55 -0.0 1,480,178 - AO353_06635 0.55 +0.1
Or see this region's nucleotide sequence