Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0115
Experiment: Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
105,815 | - | BT0114 | 0.28 | -0.0 | |
105,818 | + | BT0114 | 0.28 | -1.0 | |
105,935 | + | BT0114 | 0.39 | -1.9 | |
105,935 | + | BT0114 | 0.39 | -2.1 | |
105,968 | + | BT0114 | 0.42 | -0.0 | |
105,971 | + | BT0114 | 0.42 | -0.0 | |
106,017 | - | BT0114 | 0.47 | -0.7 | |
106,018 | + | BT0114 | 0.47 | -0.8 | |
106,094 | + | BT0114 | 0.54 | -1.9 | |
106,177 | + | BT0114 | 0.62 | -1.2 | |
106,216 | - | BT0114 | 0.66 | -0.5 | |
106,268 | + | BT0114 | 0.71 | -0.4 | |
106,269 | - | BT0114 | 0.71 | -0.3 | |
106,269 | - | BT0114 | 0.71 | -0.0 | |
106,272 | + | BT0114 | 0.71 | -0.8 | |
106,272 | + | BT0114 | 0.71 | +0.6 | |
106,272 | + | BT0114 | 0.71 | -0.0 | |
106,273 | - | BT0114 | 0.71 | -1.6 | |
106,395 | + | BT0114 | 0.83 | -0.3 | |
106,427 | + | BT0114 | 0.86 | +0.6 | |
106,427 | + | BT0114 | 0.86 | -1.2 | |
106,482 | + | -0.0 | |||
106,483 | - | -0.9 | |||
106,483 | - | -1.6 | |||
106,511 | - | -1.4 | |||
106,529 | - | -0.4 | |||
106,537 | - | -0.0 | |||
106,640 | + | BT0115 | 0.13 | -3.6 | |
106,640 | + | BT0115 | 0.13 | -2.1 | |
106,747 | + | BT0115 | 0.38 | -0.0 | |
106,794 | + | BT0115 | 0.48 | -1.6 | |
106,815 | + | BT0115 | 0.53 | -1.5 | |
106,877 | + | BT0115 | 0.68 | -1.6 | |
106,987 | + | +1.6 | |||
107,020 | + | -1.8 | |||
107,020 | + | -1.2 | |||
107,154 | + | -1.4 | |||
107,277 | + | BT0116 | 0.15 | +1.2 | |
107,332 | - | BT0116 | 0.18 | -2.3 | |
107,494 | - | BT0116 | 0.28 | +1.8 | |
107,498 | - | BT0116 | 0.28 | -0.0 | |
107,582 | + | BT0116 | 0.33 | -0.8 | |
107,788 | - | BT0116 | 0.45 | -0.4 | |
107,832 | - | BT0116 | 0.47 | -1.6 | |
107,847 | + | BT0116 | 0.48 | -1.9 | |
107,852 | + | BT0116 | 0.49 | -0.9 | |
107,870 | + | BT0116 | 0.50 | -0.6 | |
107,904 | - | BT0116 | 0.52 | -0.4 | |
107,906 | - | BT0116 | 0.52 | -0.0 | |
107,937 | - | BT0116 | 0.54 | +0.3 | |
107,966 | - | BT0116 | 0.55 | +1.6 |
Or see this region's nucleotide sequence