Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5906

Experiment: 4-Hydroxyacetophenone 0.00025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyacetophenone 0.00025 M
6,725,430	+		Pf6N2E2_5905	0.17	+1.5
6,725,430	+		Pf6N2E2_5905	0.17	-1.2
6,725,430	+		Pf6N2E2_5905	0.17	+0.7
6,725,532	+		Pf6N2E2_5905	0.29	-0.7
6,725,532	+		Pf6N2E2_5905	0.29	+1.0
6,725,533	-		Pf6N2E2_5905	0.29	+0.2
6,725,652	+		Pf6N2E2_5905	0.43	-0.2
6,725,652	+		Pf6N2E2_5905	0.43	+0.1
6,725,652	+		Pf6N2E2_5905	0.43	+0.3
6,725,653	-		Pf6N2E2_5905	0.43	-1.2
6,725,653	-		Pf6N2E2_5905	0.43	-0.1
6,725,844	+		Pf6N2E2_5905	0.65	+0.4
6,725,844	+		Pf6N2E2_5905	0.65	+0.0
6,725,844	+		Pf6N2E2_5905	0.65	+0.3
6,725,844	+		Pf6N2E2_5905	0.65	+0.6
6,725,844	+		Pf6N2E2_5905	0.65	+0.1
6,725,844	+		Pf6N2E2_5905	0.65	+0.3
6,725,845	-		Pf6N2E2_5905	0.65	+1.2
6,725,845	-		Pf6N2E2_5905	0.65	-0.4
6,725,845	-		Pf6N2E2_5905	0.65	-0.9
6,725,927	+		Pf6N2E2_5905	0.74	-0.6
6,726,148	+				-1.6
6,726,149	-				-1.0
6,726,182	-				-2.0
6,726,182	-				-0.2
6,726,182	-				+0.8
6,726,192	-				+0.0
6,726,206	-				-0.9
6,726,206	-				+0.0
6,726,396	-				+1.2
6,726,422	+				-1.3
6,726,422	+				-0.2
6,726,422	+				+1.3
6,726,422	+				-0.1
6,726,422	+				+0.1
6,726,423	-				+0.5
6,726,489	-		Pf6N2E2_5906	0.26	-1.2
6,726,560	+		Pf6N2E2_5906	0.58	-1.2
6,726,560	+		Pf6N2E2_5906	0.58	-0.5
6,726,687	-				-0.4
6,726,700	+				+0.6
6,726,727	+				-0.2
6,726,778	+				-0.2
6,726,778	+				-0.5
6,726,784	-				+1.4
6,726,829	+				+0.6
6,726,829	+				+0.3
6,726,829	+				+0.4
6,726,829	+				+0.3
6,726,829	+				-0.1
6,726,830	-				-0.2
6,727,172	+		Pf6N2E2_5908	0.26	+0.2
6,727,172	+		Pf6N2E2_5908	0.26	-1.5
6,727,173	-		Pf6N2E2_5908	0.26	+0.7
6,727,173	-		Pf6N2E2_5908	0.26	-0.2
6,727,173	-		Pf6N2E2_5908	0.26	-0.3
6,727,173	-		Pf6N2E2_5908	0.26	+0.1
6,727,173	-		Pf6N2E2_5908	0.26	+0.1
6,727,174	+		Pf6N2E2_5908	0.26	+0.9
6,727,175	-		Pf6N2E2_5908	0.27	-0.1
6,727,175	-		Pf6N2E2_5908	0.27	-1.8
6,727,206	+		Pf6N2E2_5908	0.32	+0.2
6,727,207	-		Pf6N2E2_5908	0.33	-0.0
6,727,207	-		Pf6N2E2_5908	0.33	+0.2
6,727,243	+		Pf6N2E2_5908	0.39	+0.1
6,727,244	-		Pf6N2E2_5908	0.40	+0.3
6,727,244	-		Pf6N2E2_5908	0.40	+0.1
6,727,247	+		Pf6N2E2_5908	0.40	-0.3
6,727,247	+		Pf6N2E2_5908	0.40	-0.2
6,727,247	+		Pf6N2E2_5908	0.40	-0.1
6,727,247	+		Pf6N2E2_5908	0.40	-0.6
6,727,247	+		Pf6N2E2_5908	0.40	-0.1
6,727,248	-		Pf6N2E2_5908	0.40	+0.9
6,727,248	-		Pf6N2E2_5908	0.40	+1.3
6,727,248	-		Pf6N2E2_5908	0.40	-0.3
6,727,248	-		Pf6N2E2_5908	0.40	-0.9
6,727,320	-		Pf6N2E2_5908	0.54	-1.0
6,727,445	+		Pf6N2E2_5908	0.77	+0.1
6,727,446	-		Pf6N2E2_5908	0.78	+0.4
6,727,446	-		Pf6N2E2_5908	0.78	-1.8
6,727,562	+				-0.7
6,727,563	-				-0.5
6,727,563	-				-0.5
6,727,563	-				-0.1
6,727,563	-				+0.0