Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5730

Experiment: 4-Hydroxyacetophenone 0.00025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyacetophenone 0.00025 M
6,546,880	+				-2.1
6,546,880	+				+0.5
6,546,880	+				-0.9
6,546,880	+				+0.6
6,546,880	+				-0.3
6,546,880	+				-1.7
6,546,881	-				+1.1
6,546,881	-				+2.2
6,546,881	-				-0.1
6,546,907	+				-0.2
6,546,907	+				-0.6
6,546,908	-				+1.4
6,546,908	-				+0.9
6,546,909	+				-0.9
6,546,909	+				+0.5
6,546,909	+				-0.6
6,546,909	+				+0.2
6,546,910	-				+0.0
6,546,910	-				-0.1
6,546,916	-				-0.5
6,546,933	+				+0.3
6,546,933	+				+1.2
6,546,933	+				+0.6
6,546,933	+				+0.4
6,546,933	+				+0.2
6,546,933	+				+0.9
6,546,934	-				+0.6
6,546,934	-				-1.4
6,546,935	+				+0.4
6,546,935	+				-0.3
6,546,935	+				+0.6
6,546,936	-				+1.0
6,546,936	-				+0.4
6,546,942	+				-0.8
6,546,943	-				+0.2
6,547,061	-				-0.5
6,547,101	+				+0.1
6,547,159	+				+0.3
6,547,325	-		Pf6N2E2_5730	0.23	-1.0
6,547,330	+		Pf6N2E2_5730	0.24	-2.4
6,547,330	+		Pf6N2E2_5730	0.24	+0.0
6,547,646	-		Pf6N2E2_5730	0.54	-1.4
6,548,149	+				+0.1
6,548,149	+				-0.1
6,548,149	+				-0.2
6,548,149	+				-0.0
6,548,149	+				-0.1
6,548,149	+				+0.9
6,548,149	+				+0.1
6,548,149	+				-0.8
6,548,150	-				+0.7
6,548,150	-				+0.2
6,548,150	-				-1.8
6,548,150	-				+0.3
6,548,150	-				-0.5
6,548,150	-				-2.1
6,548,150	-				-0.1
6,548,150	-				+0.8
6,548,150	-				-0.6
6,548,150	-				+0.4
6,548,150	-				-0.1
6,548,150	-				+0.0
6,548,150	-				-1.2
6,548,150	-				+1.8
6,548,150	-				-0.4
6,548,151	+				-2.8
6,548,151	+				+0.5
6,548,151	+				-0.1
6,548,151	+				-0.7
6,548,151	+				-0.3
6,548,151	+				+0.1
6,548,151	+				-1.4
6,548,151	+				-0.3
6,548,151	+				+0.4
6,548,151	+				+0.5
6,548,152	-				-0.4
6,548,152	-				-0.5
6,548,152	-				+0.3
6,548,152	-				+0.6
6,548,153	+				+0.2
6,548,153	+				+1.4
6,548,153	+				+0.6
6,548,153	+				-0.1
6,548,153	+				-0.1
6,548,154	-				+0.3
6,548,154	-				-0.9
6,548,154	-				+0.1
6,548,154	-				-0.6
6,548,154	-				+1.1
6,548,157	+				-0.6
6,548,157	+				+0.6
6,548,158	-				+0.2
6,548,158	-				+0.3
6,548,158	-				+1.2
6,548,158	-				-0.6
6,548,158	-				+1.1
6,548,158	-				-1.4
6,548,225	+				+1.7
6,548,225	+				+0.1
6,548,225	+				-0.0
6,548,225	+				-0.5
6,548,225	+				+0.4
6,548,226	-				-1.2
6,548,226	-				+0.4
6,548,226	-				+0.6
6,548,229	+				+0.2
6,548,229	+				+0.1
6,548,229	+				-0.4
6,548,229	+				+1.9
6,548,229	+				+0.3
6,548,230	-				+0.6
6,548,230	-				+0.9
6,548,230	-				+0.1
6,548,230	-				-0.7
6,548,280	+		Pf6N2E2_5731	0.10	+0.3
6,548,281	-		Pf6N2E2_5731	0.10	+0.1
6,548,281	-		Pf6N2E2_5731	0.10	-1.0
6,548,281	-		Pf6N2E2_5731	0.10	-0.5
6,548,351	-		Pf6N2E2_5731	0.17	-0.3
6,548,351	-		Pf6N2E2_5731	0.17	-1.9
6,548,497	+		Pf6N2E2_5731	0.31	-1.8
6,548,498	-		Pf6N2E2_5731	0.31	-0.8
6,548,498	-		Pf6N2E2_5731	0.31	-0.2
6,548,555	+		Pf6N2E2_5731	0.36	-2.1
6,548,555	+		Pf6N2E2_5731	0.36	-0.2
6,548,556	-		Pf6N2E2_5731	0.36	+1.9
6,548,556	-		Pf6N2E2_5731	0.36	+0.4
6,548,667	+		Pf6N2E2_5731	0.46	-0.3
6,548,667	+		Pf6N2E2_5731	0.46	-0.1
6,548,667	+		Pf6N2E2_5731	0.46	-1.1
6,548,667	+		Pf6N2E2_5731	0.46	-1.3
6,548,667	+		Pf6N2E2_5731	0.46	-0.1
6,548,668	-		Pf6N2E2_5731	0.46	+0.0
6,548,668	-		Pf6N2E2_5731	0.46	+0.4
6,548,668	-		Pf6N2E2_5731	0.46	+0.1
6,548,668	-		Pf6N2E2_5731	0.46	+1.5
6,548,826	+		Pf6N2E2_5731	0.61	-0.7
6,548,826	+		Pf6N2E2_5731	0.61	+0.3
6,548,826	+		Pf6N2E2_5731	0.61	+0.3
6,548,826	+		Pf6N2E2_5731	0.61	+0.2
6,548,826	+		Pf6N2E2_5731	0.61	+0.5
6,548,826	+		Pf6N2E2_5731	0.61	+0.0
6,548,826	+		Pf6N2E2_5731	0.61	+0.9
6,548,848	+		Pf6N2E2_5731	0.63	-0.5
6,548,907	+		Pf6N2E2_5731	0.69	-0.4
6,548,907	+		Pf6N2E2_5731	0.69	-1.1
6,548,907	+		Pf6N2E2_5731	0.69	+0.9
6,548,907	+		Pf6N2E2_5731	0.69	+0.3
6,548,907	+		Pf6N2E2_5731	0.69	+0.9
6,548,907	+		Pf6N2E2_5731	0.69	-1.6
6,548,907	+		Pf6N2E2_5731	0.69	+1.4
6,548,908	-		Pf6N2E2_5731	0.69	-0.5
6,548,908	-		Pf6N2E2_5731	0.69	-0.7
6,548,908	-		Pf6N2E2_5731	0.69	+0.8
6,548,927	+		Pf6N2E2_5731	0.71	-0.1
6,549,062	+		Pf6N2E2_5731	0.83	+0.7
6,549,062	+		Pf6N2E2_5731	0.83	+0.1
6,549,063	-		Pf6N2E2_5731	0.83	-1.3