Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5069

Experiment: 4-Hydroxyacetophenone 0.00025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyacetophenone 0.00025 M
5,843,945	+		Pf6N2E2_5068	0.31	-1.8
5,843,945	+		Pf6N2E2_5068	0.31	+2.2
5,843,946	-		Pf6N2E2_5068	0.31	-1.1
5,844,194	-		Pf6N2E2_5068	0.49	-2.6
5,844,552	+		Pf6N2E2_5068	0.73	-1.5
5,844,552	+		Pf6N2E2_5068	0.73	-2.3
5,844,552	+		Pf6N2E2_5068	0.73	-2.7
5,844,552	+		Pf6N2E2_5068	0.73	-1.0
5,844,552	+		Pf6N2E2_5068	0.73	+0.4
5,844,552	+		Pf6N2E2_5068	0.73	-0.0
5,844,553	-		Pf6N2E2_5068	0.74	-1.5
5,844,553	-		Pf6N2E2_5068	0.74	-1.0
5,844,553	-		Pf6N2E2_5068	0.74	-1.0
5,844,553	-		Pf6N2E2_5068	0.74	-1.5
5,844,573	+		Pf6N2E2_5068	0.75	-2.3
5,844,573	+		Pf6N2E2_5068	0.75	-2.1
5,844,573	+		Pf6N2E2_5068	0.75	-1.5
5,844,573	+		Pf6N2E2_5068	0.75	-0.3
5,844,573	+		Pf6N2E2_5068	0.75	-0.7
5,844,573	+		Pf6N2E2_5068	0.75	-2.3
5,844,574	-		Pf6N2E2_5068	0.75	-0.4
5,844,574	-		Pf6N2E2_5068	0.75	-1.0
5,844,574	-		Pf6N2E2_5068	0.75	-2.5
5,844,574	-		Pf6N2E2_5068	0.75	-0.5
5,844,574	-		Pf6N2E2_5068	0.75	-1.2
5,844,574	-		Pf6N2E2_5068	0.75	-3.0
5,844,574	-		Pf6N2E2_5068	0.75	-1.8
5,844,574	-		Pf6N2E2_5068	0.75	-2.9
5,844,574	-		Pf6N2E2_5068	0.75	-1.7
5,844,663	+		Pf6N2E2_5068	0.81	+0.1
5,844,663	+		Pf6N2E2_5068	0.81	-0.1
5,844,747	+		Pf6N2E2_5068	0.87	-1.0
5,844,748	-		Pf6N2E2_5068	0.87	-0.6
5,844,777	+		Pf6N2E2_5068	0.89	-2.9
5,844,777	+		Pf6N2E2_5068	0.89	-2.8
5,844,778	-		Pf6N2E2_5068	0.89	-0.8
5,844,778	-		Pf6N2E2_5068	0.89	-0.8
5,844,778	-		Pf6N2E2_5068	0.89	-1.3
5,844,854	+				-0.1
5,844,855	-				-0.8
5,844,942	-				-2.9
5,844,993	+				-1.7
5,844,993	+				-1.3
5,844,993	+				-1.4
5,844,993	+				-2.5
5,844,993	+				-1.7
5,844,993	+				-2.9
5,844,993	+				-1.8
5,844,994	-				-2.8
5,844,994	-				-2.2
5,844,994	-				-1.8
5,844,994	-				+0.0
5,844,994	-				-1.5
5,844,994	-				-0.3
5,844,994	-				-0.8
5,844,994	-				-2.8
5,844,994	-				-0.9
5,844,996	-				-1.8
5,845,161	+		Pf6N2E2_5069	0.22	-2.7
5,845,185	+		Pf6N2E2_5069	0.25	-1.5
5,845,186	-		Pf6N2E2_5069	0.25	-1.0
5,845,186	-		Pf6N2E2_5069	0.25	-1.5
5,845,446	+		Pf6N2E2_5069	0.51	-0.1
5,845,704	+		Pf6N2E2_5069	0.76	-1.2
5,845,704	+		Pf6N2E2_5069	0.76	-1.1
5,845,704	+		Pf6N2E2_5069	0.76	+0.3
5,845,705	-		Pf6N2E2_5069	0.76	-1.3
5,845,705	-		Pf6N2E2_5069	0.76	-0.3
5,845,705	-		Pf6N2E2_5069	0.76	-1.7
5,845,705	-		Pf6N2E2_5069	0.76	-0.6
5,845,846	+				-1.5
5,845,846	+				-1.6
5,845,881	+				-2.6
5,845,881	+				-1.9
5,845,882	-				-3.0
5,845,882	-				-1.9
5,845,896	+				-2.6
5,845,897	-				-0.0
5,845,899	+				-1.4
5,845,899	+				-0.8
5,845,899	+				-1.5
5,845,899	+				-2.6
5,845,899	+				-0.9
5,845,899	+				-0.9
5,845,900	-				-1.9
5,845,900	-				-2.5
5,845,900	-				-0.7
5,845,900	-				-0.1
5,845,900	-				-2.1
5,845,900	-				-0.9
5,845,900	-				-1.1
5,845,900	-				-2.4
5,846,164	+				+0.7
5,846,165	-				-0.3
5,846,168	+				+0.1
5,846,168	+				+0.3
5,846,276	-				-0.2
5,846,276	-				+0.6
5,846,494	+		Pf6N2E2_5071	0.29	-0.0
5,846,494	+		Pf6N2E2_5071	0.29	-0.6
5,846,494	+		Pf6N2E2_5071	0.29	+0.9
5,846,494	+		Pf6N2E2_5071	0.29	+0.5
5,846,494	+		Pf6N2E2_5071	0.29	-0.9
5,846,494	+		Pf6N2E2_5071	0.29	-0.6
5,846,494	+		Pf6N2E2_5071	0.29	+2.2
5,846,494	+		Pf6N2E2_5071	0.29	+0.8
5,846,494	+		Pf6N2E2_5071	0.29	-0.7
5,846,494	+		Pf6N2E2_5071	0.29	-0.1
5,846,494	+		Pf6N2E2_5071	0.29	+0.6
5,846,494	+		Pf6N2E2_5071	0.29	+0.2
5,846,495	-		Pf6N2E2_5071	0.29	-1.3
5,846,495	-		Pf6N2E2_5071	0.29	+0.1
5,846,495	-		Pf6N2E2_5071	0.29	+0.7
5,846,495	-		Pf6N2E2_5071	0.29	-2.0
5,846,495	-		Pf6N2E2_5071	0.29	-0.2
5,846,495	-		Pf6N2E2_5071	0.29	+0.7
5,846,495	-		Pf6N2E2_5071	0.29	-0.3
5,846,495	-		Pf6N2E2_5071	0.29	-0.0
5,846,495	-		Pf6N2E2_5071	0.29	-0.6
5,846,495	-		Pf6N2E2_5071	0.29	+0.4
5,846,495	-		Pf6N2E2_5071	0.29	+0.4
5,846,495	-		Pf6N2E2_5071	0.29	-0.1
5,846,495	-		Pf6N2E2_5071	0.29	+0.2
5,846,515	+		Pf6N2E2_5071	0.31	-0.6
5,846,515	+		Pf6N2E2_5071	0.31	+1.1
5,846,515	+		Pf6N2E2_5071	0.31	+0.3
5,846,516	-		Pf6N2E2_5071	0.31	-0.8
5,846,516	-		Pf6N2E2_5071	0.31	+0.7
5,846,728	-		Pf6N2E2_5071	0.50	-0.9
5,846,769	-		Pf6N2E2_5071	0.53	+1.0
5,846,824	+		Pf6N2E2_5071	0.58	-0.3
5,846,824	+		Pf6N2E2_5071	0.58	-0.6
5,846,835	+		Pf6N2E2_5071	0.59	-1.7
5,846,835	+		Pf6N2E2_5071	0.59	+0.9
5,846,836	-		Pf6N2E2_5071	0.59	-0.3