Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26160 and BWI76_RS26165 are separated by 10 nucleotides BWI76_RS26165 and BWI76_RS26170 are separated by 619 nucleotides
BWI76_RS26160: BWI76_RS26160 - 4-alpha-glucanotransferase (EC 2.4.1.25) <small>(from data)</small>, at 5,405,233 to 5,407,326
_RS26160
BWI76_RS26165: BWI76_RS26165 - Glycogen phosphorylase (EC 2.4.1.1) <small>(from data)</small>, at 5,407,337 to 5,409,727
_RS26165
BWI76_RS26170: BWI76_RS26170 - transcriptional regulator MalT, at 5,410,347 to 5,413,052
_RS26170
Position (kb) 5407
5408
5409
5410 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5406.362 kb on + strand, within BWI76_RS26160 at 5406.370 kb on - strand, within BWI76_RS26160 at 5406.370 kb on - strand, within BWI76_RS26160 at 5406.377 kb on + strand, within BWI76_RS26160 at 5406.546 kb on + strand, within BWI76_RS26160 at 5406.561 kb on + strand, within BWI76_RS26160 at 5406.644 kb on + strand, within BWI76_RS26160 at 5406.719 kb on - strand, within BWI76_RS26160 at 5406.858 kb on - strand, within BWI76_RS26160 at 5406.869 kb on + strand, within BWI76_RS26160 at 5406.877 kb on - strand, within BWI76_RS26160 at 5407.250 kb on + strand at 5407.323 kb on + strand at 5407.329 kb on - strand at 5407.389 kb on + strand at 5407.433 kb on + strand at 5407.619 kb on - strand, within BWI76_RS26165 at 5407.657 kb on - strand, within BWI76_RS26165 at 5407.835 kb on - strand, within BWI76_RS26165 at 5407.854 kb on + strand at 5408.072 kb on - strand, within BWI76_RS26165 at 5408.092 kb on - strand, within BWI76_RS26165 at 5408.093 kb on + strand, within BWI76_RS26165 at 5408.223 kb on - strand, within BWI76_RS26165 at 5408.223 kb on - strand, within BWI76_RS26165 at 5408.340 kb on + strand, within BWI76_RS26165 at 5408.410 kb on + strand, within BWI76_RS26165 at 5408.453 kb on + strand, within BWI76_RS26165 at 5408.498 kb on + strand, within BWI76_RS26165 at 5408.651 kb on + strand, within BWI76_RS26165 at 5408.835 kb on + strand, within BWI76_RS26165 at 5408.860 kb on + strand, within BWI76_RS26165 at 5408.875 kb on + strand, within BWI76_RS26165 at 5409.037 kb on + strand, within BWI76_RS26165 at 5409.180 kb on - strand, within BWI76_RS26165 at 5409.238 kb on - strand, within BWI76_RS26165 at 5409.284 kb on - strand, within BWI76_RS26165 at 5409.392 kb on + strand, within BWI76_RS26165 at 5409.400 kb on - strand, within BWI76_RS26165 at 5409.424 kb on + strand, within BWI76_RS26165 at 5409.441 kb on - strand, within BWI76_RS26165 at 5409.469 kb on + strand, within BWI76_RS26165 at 5409.632 kb on - strand at 5409.642 kb on - strand at 5409.698 kb on - strand at 5409.758 kb on + strand at 5409.797 kb on + strand at 5409.804 kb on - strand at 5409.826 kb on - strand at 5409.840 kb on + strand at 5409.855 kb on + strand at 5409.863 kb on - strand at 5409.863 kb on - strand at 5409.917 kb on - strand at 5409.930 kb on - strand at 5409.931 kb on - strand at 5409.931 kb on - strand at 5409.956 kb on + strand at 5409.956 kb on - strand at 5410.035 kb on - strand at 5410.159 kb on - strand at 5410.159 kb on - strand at 5410.207 kb on - strand at 5410.207 kb on - strand at 5410.217 kb on + strand at 5410.269 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.322 kb on + strand at 5410.327 kb on + strand at 5410.330 kb on - strand at 5410.345 kb on - strand at 5410.347 kb on + strand at 5410.366 kb on - strand at 5410.366 kb on - strand at 5410.370 kb on - strand at 5410.371 kb on + strand at 5410.372 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.381 kb on + strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.389 kb on - strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.390 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.391 kb on + strand at 5410.399 kb on - strand at 5410.410 kb on - strand at 5410.436 kb on + strand at 5410.452 kb on + strand at 5410.452 kb on + strand at 5410.460 kb on - strand at 5410.470 kb on - strand at 5410.475 kb on + strand at 5410.538 kb on + strand at 5410.545 kb on + strand at 5410.560 kb on - strand at 5410.596 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 5,406,362 + BWI76_RS26160 0.54 -0.9 5,406,370 - BWI76_RS26160 0.54 +0.1 5,406,370 - BWI76_RS26160 0.54 -0.8 5,406,377 + BWI76_RS26160 0.55 -0.2 5,406,546 + BWI76_RS26160 0.63 +1.0 5,406,561 + BWI76_RS26160 0.63 +0.1 5,406,644 + BWI76_RS26160 0.67 -0.3 5,406,719 - BWI76_RS26160 0.71 -0.6 5,406,858 - BWI76_RS26160 0.78 +0.1 5,406,869 + BWI76_RS26160 0.78 -0.3 5,406,877 - BWI76_RS26160 0.79 -0.2 5,407,250 + -0.7 5,407,323 + +0.7 5,407,329 - -0.6 5,407,389 + +0.5 5,407,433 + -0.0 5,407,619 - BWI76_RS26165 0.12 -0.3 5,407,657 - BWI76_RS26165 0.13 +0.9 5,407,835 - BWI76_RS26165 0.21 -1.9 5,407,854 + +1.5 5,408,072 - BWI76_RS26165 0.31 -0.3 5,408,092 - BWI76_RS26165 0.32 +0.9 5,408,093 + BWI76_RS26165 0.32 -0.4 5,408,223 - BWI76_RS26165 0.37 -0.4 5,408,223 - BWI76_RS26165 0.37 -0.1 5,408,340 + BWI76_RS26165 0.42 +0.4 5,408,410 + BWI76_RS26165 0.45 +0.0 5,408,453 + BWI76_RS26165 0.47 +0.6 5,408,498 + BWI76_RS26165 0.49 +0.2 5,408,651 + BWI76_RS26165 0.55 -0.9 5,408,835 + BWI76_RS26165 0.63 -0.6 5,408,860 + BWI76_RS26165 0.64 -0.3 5,408,875 + BWI76_RS26165 0.64 +0.3 5,409,037 + BWI76_RS26165 0.71 -1.1 5,409,180 - BWI76_RS26165 0.77 +0.0 5,409,238 - BWI76_RS26165 0.80 -1.7 5,409,284 - BWI76_RS26165 0.81 -0.2 5,409,392 + BWI76_RS26165 0.86 +0.1 5,409,400 - BWI76_RS26165 0.86 -0.4 5,409,424 + BWI76_RS26165 0.87 -0.3 5,409,441 - BWI76_RS26165 0.88 -0.7 5,409,469 + BWI76_RS26165 0.89 +0.1 5,409,632 - +0.0 5,409,642 - +0.0 5,409,698 - +3.5 5,409,758 + +1.8 5,409,797 + -0.1 5,409,804 - +0.3 5,409,826 - -0.1 5,409,840 + +0.3 5,409,855 + +0.5 5,409,863 - -0.1 5,409,863 - +0.2 5,409,917 - +0.5 5,409,930 - +0.2 5,409,931 - -0.1 5,409,931 - +0.0 5,409,956 + -0.2 5,409,956 - +0.7 5,410,035 - +0.5 5,410,159 - -0.3 5,410,159 - -0.2 5,410,207 - +1.0 5,410,207 - -1.2 5,410,217 + -0.3 5,410,269 + -0.3 5,410,322 + -0.1 5,410,322 + +0.1 5,410,322 + +0.2 5,410,322 + -0.3 5,410,327 + +0.1 5,410,330 - -0.9 5,410,345 - +0.3 5,410,347 + -1.2 5,410,366 - +1.2 5,410,366 - -0.8 5,410,370 - +0.1 5,410,371 + +0.2 5,410,372 + +0.0 5,410,381 + +0.7 5,410,381 + -0.3 5,410,381 + -0.2 5,410,381 + -0.9 5,410,381 + -0.9 5,410,381 + -0.3 5,410,381 + +0.8 5,410,381 + -0.8 5,410,381 + +0.1 5,410,381 + +0.5 5,410,381 + +0.3 5,410,381 + +1.2 5,410,381 + -0.3 5,410,381 + -0.6 5,410,381 + +0.5 5,410,381 + -0.9 5,410,381 + -0.8 5,410,381 + -0.3 5,410,381 + -0.2 5,410,381 + -0.6 5,410,381 + -1.0 5,410,381 + -0.3 5,410,381 + -0.5 5,410,381 + +0.5 5,410,381 + -0.2 5,410,381 + -0.3 5,410,381 + -0.2 5,410,381 + +0.3 5,410,381 + -0.5 5,410,381 + -0.3 5,410,381 + -0.3 5,410,381 + +0.2 5,410,381 + -0.5 5,410,381 + -0.1 5,410,381 + +0.2 5,410,381 + +0.2 5,410,381 + +0.2 5,410,381 + +0.1 5,410,381 + +0.3 5,410,389 - -1.2 5,410,389 - +0.8 5,410,389 - -0.3 5,410,389 - +0.1 5,410,389 - -1.5 5,410,389 - +0.5 5,410,389 - -0.6 5,410,389 - -0.2 5,410,389 - +2.1 5,410,389 - -2.1 5,410,389 - -0.6 5,410,389 - -0.2 5,410,389 - -0.3 5,410,389 - -0.0 5,410,389 - -0.6 5,410,389 - +0.4 5,410,389 - +0.3 5,410,389 - -0.1 5,410,389 - -0.5 5,410,389 - -0.5 5,410,389 - -0.2 5,410,389 - +0.2 5,410,389 - +0.3 5,410,389 - +0.5 5,410,389 - -0.1 5,410,389 - +0.5 5,410,389 - -0.4 5,410,389 - -2.9 5,410,389 - -0.7 5,410,389 - -0.1 5,410,389 - +0.1 5,410,389 - -0.5 5,410,389 - -0.3 5,410,389 - -1.5 5,410,389 - +0.2 5,410,389 - -2.7 5,410,389 - +1.2 5,410,389 - -0.1 5,410,389 - -0.4 5,410,389 - +0.6 5,410,389 - -0.1 5,410,389 - +1.3 5,410,389 - -1.4 5,410,390 + -0.5 5,410,390 + +3.1 5,410,390 + -0.5 5,410,390 + -2.4 5,410,391 + -0.2 5,410,391 + +0.2 5,410,391 + -0.0 5,410,391 + +0.0 5,410,391 + +0.0 5,410,399 - +0.5 5,410,410 - -0.1 5,410,436 + -1.0 5,410,452 + -0.2 5,410,452 + -0.4 5,410,460 - -0.7 5,410,470 - +0.3 5,410,475 + +0.5 5,410,538 + -0.6 5,410,545 + -1.1 5,410,560 - +0.4 5,410,596 - +0.3
Or see this region's nucleotide sequence