Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25690 and BWI76_RS25695 overlap by 47 nucleotides BWI76_RS25695 and BWI76_RS25700 are separated by 58 nucleotides BWI76_RS25700 and BWI76_RS25705 are separated by 2 nucleotides BWI76_RS25705 and BWI76_RS25710 are separated by 107 nucleotides BWI76_RS25710 and BWI76_RS25715 are separated by 40 nucleotides
BWI76_RS25690: BWI76_RS25690 - large-conductance mechanosensitive channel, at 5,334,664 to 5,335,077
_RS25690
BWI76_RS25695: BWI76_RS25695 - ribosome alternative rescue factor ArfA, at 5,335,031 to 5,335,291
_RS25695
BWI76_RS25700: BWI76_RS25700 - heavy metal-responsive transcriptional regulator, at 5,335,350 to 5,335,775
_RS25700
BWI76_RS25705: BWI76_RS25705 - hypothetical protein, at 5,335,778 to 5,336,146
_RS25705
BWI76_RS25710: BWI76_RS25710 - 50S ribosomal protein L17, at 5,336,254 to 5,336,640
_RS25710
BWI76_RS25715: BWI76_RS25715 - DNA-directed RNA polymerase subunit alpha, at 5,336,681 to 5,337,670
_RS25715
Position (kb) 5335
5336
5337 Strain fitness (log2 ratio) -1
0
1 at 5334.793 kb on + strand, within BWI76_RS25690 at 5334.799 kb on + strand, within BWI76_RS25690 at 5334.801 kb on - strand, within BWI76_RS25690 at 5334.829 kb on - strand, within BWI76_RS25690 at 5334.851 kb on - strand, within BWI76_RS25690 at 5334.852 kb on + strand, within BWI76_RS25690 at 5334.854 kb on + strand, within BWI76_RS25690 at 5334.874 kb on + strand, within BWI76_RS25690 at 5334.874 kb on + strand, within BWI76_RS25690 at 5334.874 kb on - strand, within BWI76_RS25690 at 5334.882 kb on + strand, within BWI76_RS25690 at 5334.997 kb on + strand, within BWI76_RS25690 at 5335.000 kb on + strand, within BWI76_RS25690 at 5335.001 kb on + strand, within BWI76_RS25690 at 5335.006 kb on + strand, within BWI76_RS25690 at 5335.019 kb on + strand, within BWI76_RS25690 at 5335.032 kb on - strand at 5335.032 kb on - strand at 5335.032 kb on - strand at 5335.127 kb on + strand, within BWI76_RS25695 at 5335.136 kb on - strand, within BWI76_RS25695 at 5335.143 kb on - strand, within BWI76_RS25695 at 5335.189 kb on - strand, within BWI76_RS25695 at 5335.189 kb on - strand, within BWI76_RS25695 at 5335.209 kb on - strand, within BWI76_RS25695 at 5335.226 kb on + strand, within BWI76_RS25695 at 5335.248 kb on - strand, within BWI76_RS25695 at 5335.269 kb on + strand at 5335.277 kb on - strand at 5335.287 kb on + strand at 5335.305 kb on - strand at 5335.326 kb on + strand at 5335.326 kb on + strand at 5335.326 kb on + strand at 5335.326 kb on + strand at 5335.334 kb on - strand at 5335.416 kb on + strand, within BWI76_RS25700 at 5335.424 kb on - strand, within BWI76_RS25700 at 5335.424 kb on - strand, within BWI76_RS25700 at 5335.424 kb on - strand, within BWI76_RS25700 at 5335.512 kb on + strand, within BWI76_RS25700 at 5335.520 kb on - strand, within BWI76_RS25700 at 5335.525 kb on - strand, within BWI76_RS25700 at 5335.600 kb on + strand, within BWI76_RS25700 at 5335.691 kb on + strand, within BWI76_RS25700 at 5335.858 kb on + strand, within BWI76_RS25705 at 5335.891 kb on + strand, within BWI76_RS25705 at 5335.913 kb on + strand, within BWI76_RS25705 at 5336.028 kb on - strand, within BWI76_RS25705 at 5336.099 kb on - strand, within BWI76_RS25705
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 5,334,793 + BWI76_RS25690 0.31 +1.4 5,334,799 + BWI76_RS25690 0.33 +1.5 5,334,801 - BWI76_RS25690 0.33 +0.0 5,334,829 - BWI76_RS25690 0.40 -0.2 5,334,851 - BWI76_RS25690 0.45 +0.3 5,334,852 + BWI76_RS25690 0.45 -0.3 5,334,854 + BWI76_RS25690 0.46 -0.3 5,334,874 + BWI76_RS25690 0.51 +0.0 5,334,874 + BWI76_RS25690 0.51 -0.5 5,334,874 - BWI76_RS25690 0.51 -0.8 5,334,882 + BWI76_RS25690 0.53 -0.5 5,334,997 + BWI76_RS25690 0.80 -0.1 5,335,000 + BWI76_RS25690 0.81 +0.3 5,335,001 + BWI76_RS25690 0.81 -0.2 5,335,006 + BWI76_RS25690 0.83 -0.3 5,335,019 + BWI76_RS25690 0.86 -1.7 5,335,032 - +0.1 5,335,032 - -0.6 5,335,032 - +1.3 5,335,127 + BWI76_RS25695 0.37 -0.3 5,335,136 - BWI76_RS25695 0.40 -1.1 5,335,143 - BWI76_RS25695 0.43 +0.3 5,335,189 - BWI76_RS25695 0.61 +0.6 5,335,189 - BWI76_RS25695 0.61 -0.2 5,335,209 - BWI76_RS25695 0.68 -0.6 5,335,226 + BWI76_RS25695 0.75 +1.5 5,335,248 - BWI76_RS25695 0.83 +0.3 5,335,269 + +0.0 5,335,277 - -1.3 5,335,287 + -0.7 5,335,305 - +0.3 5,335,326 + -0.7 5,335,326 + -0.2 5,335,326 + +0.3 5,335,326 + -0.1 5,335,334 - +0.2 5,335,416 + BWI76_RS25700 0.15 -0.2 5,335,424 - BWI76_RS25700 0.17 -0.3 5,335,424 - BWI76_RS25700 0.17 +0.3 5,335,424 - BWI76_RS25700 0.17 -0.1 5,335,512 + BWI76_RS25700 0.38 +0.4 5,335,520 - BWI76_RS25700 0.40 +0.2 5,335,525 - BWI76_RS25700 0.41 -0.4 5,335,600 + BWI76_RS25700 0.59 +0.3 5,335,691 + BWI76_RS25700 0.80 +1.1 5,335,858 + BWI76_RS25705 0.22 -1.0 5,335,891 + BWI76_RS25705 0.31 -0.9 5,335,913 + BWI76_RS25705 0.37 -0.4 5,336,028 - BWI76_RS25705 0.68 -1.3 5,336,099 - BWI76_RS25705 0.87 -0.8
Or see this region's nucleotide sequence