Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24005 and BWI76_RS24010 overlap by 7 nucleotides BWI76_RS24010 and BWI76_RS24015 are separated by 154 nucleotides BWI76_RS24015 and BWI76_RS24020 are separated by 278 nucleotides
BWI76_RS24005: BWI76_RS24005 - cobalt ABC transporter ATP-binding protein, at 5,009,584 to 5,010,261
_RS24005
BWI76_RS24010: BWI76_RS24010 - hypothetical protein, at 5,010,255 to 5,010,911
_RS24010
BWI76_RS24015: BWI76_RS24015 - transketolase, at 5,011,066 to 5,013,057
_RS24015
BWI76_RS24020: BWI76_RS24020 - peptidase M48, at 5,013,336 to 5,014,094
_RS24020
Position (kb) 5011
5012
5013
5014 Strain fitness (log2 ratio) -2
-1
0
1 at 5010.119 kb on - strand, within BWI76_RS24005 at 5010.119 kb on - strand, within BWI76_RS24005 at 5010.167 kb on + strand, within BWI76_RS24005 at 5010.346 kb on + strand, within BWI76_RS24010 at 5010.422 kb on + strand, within BWI76_RS24010 at 5010.430 kb on - strand at 5010.759 kb on - strand, within BWI76_RS24010 at 5010.844 kb on - strand, within BWI76_RS24010 at 5011.064 kb on + strand at 5013.143 kb on + strand at 5013.153 kb on - strand at 5013.223 kb on + strand at 5013.231 kb on - strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.279 kb on - strand at 5013.416 kb on + strand, within BWI76_RS24020 at 5013.592 kb on - strand, within BWI76_RS24020 at 5013.612 kb on - strand, within BWI76_RS24020 at 5013.614 kb on + strand, within BWI76_RS24020 at 5013.629 kb on + strand, within BWI76_RS24020 at 5013.746 kb on + strand, within BWI76_RS24020 at 5013.867 kb on + strand, within BWI76_RS24020 at 5014.053 kb on - strand at 5014.055 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 5,010,119 - BWI76_RS24005 0.79 +0.0 5,010,119 - BWI76_RS24005 0.79 +0.4 5,010,167 + BWI76_RS24005 0.86 -0.5 5,010,346 + BWI76_RS24010 0.14 -0.2 5,010,422 + BWI76_RS24010 0.25 +0.2 5,010,430 - +0.8 5,010,759 - BWI76_RS24010 0.77 +1.0 5,010,844 - BWI76_RS24010 0.90 +0.6 5,011,064 + -0.7 5,013,143 + +0.3 5,013,153 - -0.6 5,013,223 + +0.9 5,013,231 - -0.4 5,013,271 + -0.2 5,013,271 + -0.7 5,013,271 + +1.1 5,013,271 + +0.4 5,013,271 + +0.7 5,013,271 + +1.2 5,013,279 - +0.6 5,013,416 + BWI76_RS24020 0.11 -1.9 5,013,592 - BWI76_RS24020 0.34 +0.9 5,013,612 - BWI76_RS24020 0.36 +0.0 5,013,614 + BWI76_RS24020 0.37 -0.0 5,013,629 + BWI76_RS24020 0.39 +0.5 5,013,746 + BWI76_RS24020 0.54 -0.5 5,013,867 + BWI76_RS24020 0.70 -1.2 5,014,053 - +0.5 5,014,055 + +0.3
Or see this region's nucleotide sequence