Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23650 and BWI76_RS23655 are separated by 112 nucleotides BWI76_RS23655 and BWI76_RS23660 are separated by 47 nucleotides BWI76_RS23660 and BWI76_RS23665 are separated by 53 nucleotides
BWI76_RS23650: BWI76_RS23650 - MFS transporter, at 4,935,428 to 4,936,975
_RS23650
BWI76_RS23655: BWI76_RS23655 - DeoR family transcriptional regulator, at 4,937,088 to 4,937,861
_RS23655
BWI76_RS23660: BWI76_RS23660 - pentose kinase, at 4,937,909 to 4,939,414
_RS23660
BWI76_RS23665: BWI76_RS23665 - 2-deoxyribose-5-phosphate aldolase, at 4,939,468 to 4,940,217
_RS23665
Position (kb)
4937
4938
4939
4940 Strain fitness (log2 ratio)
-1
0
1
2 at 4936.969 kb on - strand at 4936.985 kb on + strand at 4937.187 kb on - strand, within BWI76_RS23655 at 4937.187 kb on - strand, within BWI76_RS23655 at 4937.221 kb on + strand, within BWI76_RS23655 at 4937.656 kb on + strand, within BWI76_RS23655 at 4937.664 kb on - strand, within BWI76_RS23655 at 4937.713 kb on - strand, within BWI76_RS23655 at 4937.945 kb on + strand at 4937.988 kb on + strand at 4937.996 kb on - strand at 4938.292 kb on - strand, within BWI76_RS23660 at 4938.293 kb on + strand, within BWI76_RS23660 at 4938.301 kb on - strand, within BWI76_RS23660 at 4938.301 kb on - strand, within BWI76_RS23660 at 4938.529 kb on + strand, within BWI76_RS23660 at 4938.669 kb on - strand, within BWI76_RS23660 at 4938.781 kb on + strand, within BWI76_RS23660 at 4939.262 kb on + strand, within BWI76_RS23660 at 4939.279 kb on + strand at 4939.279 kb on + strand at 4939.287 kb on - strand at 4939.287 kb on - strand at 4939.828 kb on + strand, within BWI76_RS23665 at 4939.857 kb on - strand, within BWI76_RS23665 at 4939.879 kb on + strand, within BWI76_RS23665 at 4940.000 kb on + strand, within BWI76_RS23665 at 4940.042 kb on + strand, within BWI76_RS23665 at 4940.088 kb on + strand, within BWI76_RS23665 at 4940.093 kb on + strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.331 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,936,969 - -0.3 4,936,985 + +0.3 4,937,187 - BWI76_RS23655 0.13 -0.4 4,937,187 - BWI76_RS23655 0.13 -0.2 4,937,221 + BWI76_RS23655 0.17 -0.2 4,937,656 + BWI76_RS23655 0.73 -0.3 4,937,664 - BWI76_RS23655 0.74 -0.2 4,937,713 - BWI76_RS23655 0.81 -0.3 4,937,945 + -0.3 4,937,988 + +0.2 4,937,996 - +0.0 4,938,292 - BWI76_RS23660 0.25 -0.2 4,938,293 + BWI76_RS23660 0.25 -0.1 4,938,301 - BWI76_RS23660 0.26 -0.1 4,938,301 - BWI76_RS23660 0.26 -0.2 4,938,529 + BWI76_RS23660 0.41 -0.4 4,938,669 - BWI76_RS23660 0.50 +0.2 4,938,781 + BWI76_RS23660 0.58 -0.6 4,939,262 + BWI76_RS23660 0.90 +2.5 4,939,279 + -0.2 4,939,279 + +0.8 4,939,287 - -0.4 4,939,287 - +0.1 4,939,828 + BWI76_RS23665 0.48 +0.5 4,939,857 - BWI76_RS23665 0.52 +0.2 4,939,879 + BWI76_RS23665 0.55 -0.3 4,940,000 + BWI76_RS23665 0.71 -0.7 4,940,042 + BWI76_RS23665 0.77 +0.2 4,940,088 + BWI76_RS23665 0.83 +1.5 4,940,093 + BWI76_RS23665 0.83 -0.4 4,940,133 - BWI76_RS23665 0.89 -0.4 4,940,133 - BWI76_RS23665 0.89 +0.5 4,940,331 - -0.4
Or see this region's nucleotide sequence