Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19335 and BWI76_RS19340 are separated by 68 nucleotides BWI76_RS19340 and BWI76_RS19345 are separated by 9 nucleotides
BWI76_RS19335: BWI76_RS19335 - MFS transporter, at 4,028,088 to 4,029,365
_RS19335
BWI76_RS19340: BWI76_RS19340 - xylulokinase, at 4,029,434 to 4,030,897
_RS19340
BWI76_RS19345: BWI76_RS19345 - D-arabinitol 4-dehydrogenase, at 4,030,907 to 4,032,274
_RS19345
Position (kb)
4029
4030
4031 Strain fitness (log2 ratio)
-1
0
1 at 4028.603 kb on - strand, within BWI76_RS19335 at 4028.637 kb on + strand, within BWI76_RS19335 at 4028.643 kb on - strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.878 kb on - strand, within BWI76_RS19335 at 4028.900 kb on + strand, within BWI76_RS19335 at 4029.173 kb on - strand, within BWI76_RS19335 at 4029.389 kb on - strand at 4029.795 kb on + strand, within BWI76_RS19340 at 4029.915 kb on + strand, within BWI76_RS19340 at 4030.277 kb on + strand, within BWI76_RS19340 at 4030.302 kb on - strand, within BWI76_RS19340 at 4030.325 kb on - strand, within BWI76_RS19340 at 4030.380 kb on - strand, within BWI76_RS19340 at 4030.467 kb on - strand, within BWI76_RS19340 at 4030.729 kb on - strand, within BWI76_RS19340 at 4030.771 kb on + strand at 4031.063 kb on - strand, within BWI76_RS19345 at 4031.247 kb on - strand, within BWI76_RS19345 at 4031.292 kb on - strand, within BWI76_RS19345 at 4031.377 kb on - strand, within BWI76_RS19345 at 4031.391 kb on - strand, within BWI76_RS19345 at 4031.779 kb on + strand, within BWI76_RS19345
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,028,603 - BWI76_RS19335 0.40 -0.4 4,028,637 + BWI76_RS19335 0.43 -0.1 4,028,643 - BWI76_RS19335 0.43 -0.6 4,028,698 + BWI76_RS19335 0.48 +0.6 4,028,698 + BWI76_RS19335 0.48 -0.1 4,028,698 + BWI76_RS19335 0.48 -1.7 4,028,706 - BWI76_RS19335 0.48 +0.2 4,028,706 - BWI76_RS19335 0.48 +1.0 4,028,706 - BWI76_RS19335 0.48 -0.5 4,028,878 - BWI76_RS19335 0.62 -0.3 4,028,900 + BWI76_RS19335 0.64 -0.1 4,029,173 - BWI76_RS19335 0.85 +0.7 4,029,389 - -1.2 4,029,795 + BWI76_RS19340 0.25 -0.5 4,029,915 + BWI76_RS19340 0.33 -0.1 4,030,277 + BWI76_RS19340 0.58 -1.0 4,030,302 - BWI76_RS19340 0.59 -0.2 4,030,325 - BWI76_RS19340 0.61 -0.7 4,030,380 - BWI76_RS19340 0.65 +0.9 4,030,467 - BWI76_RS19340 0.71 -0.2 4,030,729 - BWI76_RS19340 0.88 +0.6 4,030,771 + -0.4 4,031,063 - BWI76_RS19345 0.11 -0.6 4,031,247 - BWI76_RS19345 0.25 -0.3 4,031,292 - BWI76_RS19345 0.28 +0.3 4,031,377 - BWI76_RS19345 0.34 -0.3 4,031,391 - BWI76_RS19345 0.35 +0.4 4,031,779 + BWI76_RS19345 0.64 +0.3
Or see this region's nucleotide sequence