Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19340

Experiment: D-Xylose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19335 and BWI76_RS19340 are separated by 68 nucleotidesBWI76_RS19340 and BWI76_RS19345 are separated by 9 nucleotides BWI76_RS19335: BWI76_RS19335 - MFS transporter, at 4,028,088 to 4,029,365 _RS19335 BWI76_RS19340: BWI76_RS19340 - xylulokinase, at 4,029,434 to 4,030,897 _RS19340 BWI76_RS19345: BWI76_RS19345 - D-arabinitol 4-dehydrogenase, at 4,030,907 to 4,032,274 _RS19345 Position (kb) 4029 4030 4031Strain fitness (log2 ratio) -1 0 1at 4028.603 kb on - strand, within BWI76_RS19335at 4028.637 kb on + strand, within BWI76_RS19335at 4028.643 kb on - strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.698 kb on + strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.706 kb on - strand, within BWI76_RS19335at 4028.878 kb on - strand, within BWI76_RS19335at 4028.900 kb on + strand, within BWI76_RS19335at 4029.173 kb on - strand, within BWI76_RS19335at 4029.389 kb on - strandat 4029.795 kb on + strand, within BWI76_RS19340at 4029.915 kb on + strand, within BWI76_RS19340at 4030.277 kb on + strand, within BWI76_RS19340at 4030.302 kb on - strand, within BWI76_RS19340at 4030.325 kb on - strand, within BWI76_RS19340at 4030.380 kb on - strand, within BWI76_RS19340at 4030.467 kb on - strand, within BWI76_RS19340at 4030.729 kb on - strand, within BWI76_RS19340at 4030.771 kb on + strandat 4031.063 kb on - strand, within BWI76_RS19345at 4031.247 kb on - strand, within BWI76_RS19345at 4031.292 kb on - strand, within BWI76_RS19345at 4031.377 kb on - strand, within BWI76_RS19345at 4031.391 kb on - strand, within BWI76_RS19345at 4031.779 kb on + strand, within BWI76_RS19345

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xylose (C)
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4,028,603 - BWI76_RS19335 0.40 -0.4
4,028,637 + BWI76_RS19335 0.43 -0.1
4,028,643 - BWI76_RS19335 0.43 -0.6
4,028,698 + BWI76_RS19335 0.48 +0.6
4,028,698 + BWI76_RS19335 0.48 -0.1
4,028,698 + BWI76_RS19335 0.48 -1.7
4,028,706 - BWI76_RS19335 0.48 +0.2
4,028,706 - BWI76_RS19335 0.48 +1.0
4,028,706 - BWI76_RS19335 0.48 -0.5
4,028,878 - BWI76_RS19335 0.62 -0.3
4,028,900 + BWI76_RS19335 0.64 -0.1
4,029,173 - BWI76_RS19335 0.85 +0.7
4,029,389 - -1.2
4,029,795 + BWI76_RS19340 0.25 -0.5
4,029,915 + BWI76_RS19340 0.33 -0.1
4,030,277 + BWI76_RS19340 0.58 -1.0
4,030,302 - BWI76_RS19340 0.59 -0.2
4,030,325 - BWI76_RS19340 0.61 -0.7
4,030,380 - BWI76_RS19340 0.65 +0.9
4,030,467 - BWI76_RS19340 0.71 -0.2
4,030,729 - BWI76_RS19340 0.88 +0.6
4,030,771 + -0.4
4,031,063 - BWI76_RS19345 0.11 -0.6
4,031,247 - BWI76_RS19345 0.25 -0.3
4,031,292 - BWI76_RS19345 0.28 +0.3
4,031,377 - BWI76_RS19345 0.34 -0.3
4,031,391 - BWI76_RS19345 0.35 +0.4
4,031,779 + BWI76_RS19345 0.64 +0.3

Or see this region's nucleotide sequence