Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12515 and BWI76_RS12520 are separated by 257 nucleotides BWI76_RS12520 and BWI76_RS12525 are separated by 176 nucleotides BWI76_RS12525 and BWI76_RS12530 are separated by 57 nucleotides
BWI76_RS12515: BWI76_RS12515 - protease, at 2,614,296 to 2,614,859
_RS12515
BWI76_RS12520: BWI76_RS12520 - hypothetical protein, at 2,615,117 to 2,615,320
_RS12520
BWI76_RS12525: BWI76_RS12525 - beta-1,4-xylosidase, at 2,615,497 to 2,617,176
_RS12525
BWI76_RS12530: BWI76_RS12530 - sugar (glycoside-Pentoside-Hexuronide) transporter, at 2,617,234 to 2,618,688
_RS12530
Position (kb)
2615
2616
2617
2618 Strain fitness (log2 ratio)
-2
-1
0
1 at 2614.625 kb on - strand, within BWI76_RS12515 at 2614.653 kb on + strand, within BWI76_RS12515 at 2614.889 kb on + strand at 2614.901 kb on - strand at 2614.901 kb on - strand at 2614.963 kb on + strand at 2615.139 kb on + strand, within BWI76_RS12520 at 2615.227 kb on + strand, within BWI76_RS12520 at 2615.232 kb on + strand, within BWI76_RS12520 at 2615.232 kb on - strand, within BWI76_RS12520 at 2615.304 kb on + strand at 2615.312 kb on - strand at 2615.412 kb on - strand at 2615.485 kb on + strand at 2615.493 kb on - strand at 2615.604 kb on - strand at 2615.619 kb on - strand at 2615.630 kb on - strand at 2615.680 kb on - strand, within BWI76_RS12525 at 2615.753 kb on - strand, within BWI76_RS12525 at 2615.773 kb on - strand, within BWI76_RS12525 at 2615.811 kb on - strand, within BWI76_RS12525 at 2615.862 kb on + strand, within BWI76_RS12525 at 2615.865 kb on - strand, within BWI76_RS12525 at 2615.963 kb on + strand, within BWI76_RS12525 at 2615.972 kb on - strand, within BWI76_RS12525 at 2616.039 kb on + strand, within BWI76_RS12525 at 2616.090 kb on + strand, within BWI76_RS12525 at 2616.130 kb on + strand, within BWI76_RS12525 at 2616.166 kb on - strand, within BWI76_RS12525 at 2616.177 kb on + strand, within BWI76_RS12525 at 2616.177 kb on + strand, within BWI76_RS12525 at 2616.259 kb on - strand, within BWI76_RS12525 at 2616.323 kb on - strand, within BWI76_RS12525 at 2616.343 kb on - strand, within BWI76_RS12525 at 2616.353 kb on - strand, within BWI76_RS12525 at 2616.384 kb on - strand, within BWI76_RS12525 at 2616.475 kb on - strand, within BWI76_RS12525 at 2616.514 kb on + strand, within BWI76_RS12525 at 2616.523 kb on - strand, within BWI76_RS12525 at 2616.619 kb on - strand, within BWI76_RS12525 at 2616.702 kb on - strand, within BWI76_RS12525 at 2616.744 kb on - strand, within BWI76_RS12525 at 2616.776 kb on - strand, within BWI76_RS12525 at 2616.793 kb on + strand, within BWI76_RS12525 at 2616.801 kb on - strand, within BWI76_RS12525 at 2616.806 kb on + strand, within BWI76_RS12525 at 2616.814 kb on - strand, within BWI76_RS12525 at 2616.907 kb on + strand, within BWI76_RS12525 at 2616.907 kb on + strand, within BWI76_RS12525 at 2616.915 kb on - strand, within BWI76_RS12525 at 2616.916 kb on - strand, within BWI76_RS12525 at 2616.933 kb on + strand, within BWI76_RS12525 at 2616.961 kb on - strand, within BWI76_RS12525 at 2617.067 kb on + strand at 2617.075 kb on - strand at 2617.187 kb on - strand at 2617.187 kb on - strand at 2617.239 kb on + strand at 2617.261 kb on + strand at 2617.300 kb on - strand at 2617.325 kb on - strand at 2617.337 kb on + strand at 2617.547 kb on - strand, within BWI76_RS12530 at 2617.565 kb on - strand, within BWI76_RS12530 at 2617.566 kb on - strand, within BWI76_RS12530 at 2617.590 kb on + strand at 2617.590 kb on + strand, within BWI76_RS12530 at 2617.598 kb on - strand, within BWI76_RS12530 at 2617.598 kb on - strand, within BWI76_RS12530 at 2617.631 kb on - strand, within BWI76_RS12530 at 2617.638 kb on - strand, within BWI76_RS12530 at 2617.649 kb on - strand, within BWI76_RS12530 at 2617.787 kb on + strand, within BWI76_RS12530 at 2617.787 kb on + strand, within BWI76_RS12530 at 2617.800 kb on - strand, within BWI76_RS12530 at 2617.815 kb on - strand, within BWI76_RS12530 at 2617.831 kb on + strand, within BWI76_RS12530 at 2617.839 kb on - strand at 2617.889 kb on + strand, within BWI76_RS12530 at 2617.937 kb on + strand, within BWI76_RS12530 at 2617.956 kb on + strand, within BWI76_RS12530 at 2617.964 kb on - strand, within BWI76_RS12530 at 2617.964 kb on - strand, within BWI76_RS12530 at 2617.997 kb on - strand, within BWI76_RS12530 at 2618.015 kb on + strand, within BWI76_RS12530 at 2618.118 kb on + strand, within BWI76_RS12530 at 2618.126 kb on - strand, within BWI76_RS12530 at 2618.126 kb on - strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 2,614,625 - BWI76_RS12515 0.58 +0.4 2,614,653 + BWI76_RS12515 0.63 -0.3 2,614,889 + -0.3 2,614,901 - -0.1 2,614,901 - -1.9 2,614,963 + -0.0 2,615,139 + BWI76_RS12520 0.11 -0.3 2,615,227 + BWI76_RS12520 0.54 -0.2 2,615,232 + BWI76_RS12520 0.56 +0.6 2,615,232 - BWI76_RS12520 0.56 -2.0 2,615,304 + -0.4 2,615,312 - -0.7 2,615,412 - +0.7 2,615,485 + -0.7 2,615,493 - -0.4 2,615,604 - -0.4 2,615,619 - +0.2 2,615,630 - -0.3 2,615,680 - BWI76_RS12525 0.11 +0.1 2,615,753 - BWI76_RS12525 0.15 -0.1 2,615,773 - BWI76_RS12525 0.16 -0.3 2,615,811 - BWI76_RS12525 0.19 -0.3 2,615,862 + BWI76_RS12525 0.22 -0.8 2,615,865 - BWI76_RS12525 0.22 -0.6 2,615,963 + BWI76_RS12525 0.28 -0.7 2,615,972 - BWI76_RS12525 0.28 +1.4 2,616,039 + BWI76_RS12525 0.32 -0.3 2,616,090 + BWI76_RS12525 0.35 -0.6 2,616,130 + BWI76_RS12525 0.38 -1.2 2,616,166 - BWI76_RS12525 0.40 -0.8 2,616,177 + BWI76_RS12525 0.40 -0.4 2,616,177 + BWI76_RS12525 0.40 +0.7 2,616,259 - BWI76_RS12525 0.45 -0.7 2,616,323 - BWI76_RS12525 0.49 +0.4 2,616,343 - BWI76_RS12525 0.50 -0.3 2,616,353 - BWI76_RS12525 0.51 -1.0 2,616,384 - BWI76_RS12525 0.53 -1.0 2,616,475 - BWI76_RS12525 0.58 -0.7 2,616,514 + BWI76_RS12525 0.61 -0.4 2,616,523 - BWI76_RS12525 0.61 +0.5 2,616,619 - BWI76_RS12525 0.67 -0.2 2,616,702 - BWI76_RS12525 0.72 +0.8 2,616,744 - BWI76_RS12525 0.74 -0.8 2,616,776 - BWI76_RS12525 0.76 -0.8 2,616,793 + BWI76_RS12525 0.77 -0.3 2,616,801 - BWI76_RS12525 0.78 -1.5 2,616,806 + BWI76_RS12525 0.78 -2.0 2,616,814 - BWI76_RS12525 0.78 -0.7 2,616,907 + BWI76_RS12525 0.84 -0.9 2,616,907 + BWI76_RS12525 0.84 -0.2 2,616,915 - BWI76_RS12525 0.84 +0.3 2,616,916 - BWI76_RS12525 0.84 -0.7 2,616,933 + BWI76_RS12525 0.85 -0.7 2,616,961 - BWI76_RS12525 0.87 +0.2 2,617,067 + -0.6 2,617,075 - +0.7 2,617,187 - +1.2 2,617,187 - +0.2 2,617,239 + +0.1 2,617,261 + -2.1 2,617,300 - -0.2 2,617,325 - -1.3 2,617,337 + -0.3 2,617,547 - BWI76_RS12530 0.22 -0.3 2,617,565 - BWI76_RS12530 0.23 +0.3 2,617,566 - BWI76_RS12530 0.23 +1.0 2,617,590 + -0.6 2,617,590 + BWI76_RS12530 0.24 -2.7 2,617,598 - BWI76_RS12530 0.25 +0.8 2,617,598 - BWI76_RS12530 0.25 -0.1 2,617,631 - BWI76_RS12530 0.27 -0.8 2,617,638 - BWI76_RS12530 0.28 -0.4 2,617,649 - BWI76_RS12530 0.29 -2.0 2,617,787 + BWI76_RS12530 0.38 +0.1 2,617,787 + BWI76_RS12530 0.38 -0.9 2,617,800 - BWI76_RS12530 0.39 -0.7 2,617,815 - BWI76_RS12530 0.40 +1.6 2,617,831 + BWI76_RS12530 0.41 -0.4 2,617,839 - +0.4 2,617,889 + BWI76_RS12530 0.45 -0.5 2,617,937 + BWI76_RS12530 0.48 -0.9 2,617,956 + BWI76_RS12530 0.50 -0.2 2,617,964 - BWI76_RS12530 0.50 +1.2 2,617,964 - BWI76_RS12530 0.50 -0.4 2,617,997 - BWI76_RS12530 0.52 +0.5 2,618,015 + BWI76_RS12530 0.54 -2.3 2,618,118 + BWI76_RS12530 0.61 -2.2 2,618,126 - BWI76_RS12530 0.61 +0.2 2,618,126 - BWI76_RS12530 0.61 -0.2 2,618,169 + BWI76_RS12530 0.64 +0.4 2,618,169 + BWI76_RS12530 0.64 +0.4 2,618,169 + BWI76_RS12530 0.64 -0.1 2,618,169 + BWI76_RS12530 0.64 -0.2
Or see this region's nucleotide sequence